Functional clusters

Information

  • Type Gene Ontology
  • Description galactoside 2-alpha-L-fucosyltransferase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group9 3 CH_ach_6 6 8 2.08623e-18
Arabidopsis lyrata scaffold_1 3 CH_aly_124 3 4 0.00000146363
Amaranthus hybridus AmaHy_arrow1_Scaffold_12 3 CH_amhyb_210 2 2 0.000841751
Arabidopsis thaliana Chr1 3 CH_ath_204 3 5 0.00000103403
Arabidopsis thaliana Chr2 3 CH_ath_473 3 23 0.000182867
Brassica carinata ChrC05 3 CH_bca_130 4 4 0.00000000193544
Brassica carinata ChrC06 3 CH_bca_131 4 4 0.00000000193544
Brassica carinata ChrC07 3 CH_bca_153 4 5 0.00000000967438
Brassica carinata ChrB08 3 CH_bca_396 3 3 0.00000532583
Brassica carinata ChrB03 3 CH_bca_51 5 5 0.000000000000682674
Brassica carinata ChrC07 3 CH_bca_69 5 6 0.00000000000409483
Brassica napus A08 3 CH_bna_115 4 4 0.00000000126714
Brassica napus A09 3 CH_bna_116 4 4 0.00000000126714
Brassica napus C05 3 CH_bna_117 4 4 0.00000000126714
Brassica napus C08 3 CH_bna_118 4 4 0.00000000126714
Brassica napus C08 3 CH_bna_119 4 4 0.00000000126714
Brassica napus A06 3 CH_bna_27 6 6 1.15263e-16
Brassica oleracea C8 3 CH_bol_163 3 3 0.00000108977
Brassica oleracea C8 3 CH_bol_41 5 8 0.00000000000296526
Brassica oleracea C5 3 CH_bol_81 4 7 0.0000000087224
Brassica rapa A09 3 CH_bra_144 3 4 0.000010713
Brassica rapa A08 3 CH_bra_5 7 7 2.48522e-20
Brassica rapa A06 3 CH_bra_56 4 5 0.00000000459945
Cicer arietinum L. Ca_LG1_v3 3 CH_car_183 2 2 0.000466981
Chara braunii BFEA01000370 3 CH_cbr_85 3 11 0.0000255857
Coffea canephora chr4 3 CH_ccan_377 2 6 0.00063882
Citrus clementina scaffold_5 3 CH_ccl_84 4 4 0.0000000000248428
Ceratophyllum demersum 1 3 CH_cde_170 2 2 0.000473878
Cardamine hirsuta Chr3 3 CH_chi_187 3 5 0.0000204847
Cardamine hirsuta Chr1 3 CH_chi_82 4 5 0.0000000035411
Capsella rubella scaffold_1 3 CH_cru_61 4 4 0.000000000147763
Erigeron canadensis Conyza_canadensis_scaffold:8 3 CH_eca_55 4 9 0.00000000017074
Eutrema salsugineum scaffold_5 3 CH_esa_6 7 7 1.21685e-20
Lotus japonicus chr3 3 CH_lja_41 4 4 0.0000000000164558
Lonicera japonica GWHAAZE00000005 3 CH_lonja_437 2 2 0.000179662
Malus domestica Chr16 3 CH_mdo_175 3 3 0.0000000215706
Medicago truncatula chr4 3 CH_mtr_413 3 7 0.00000744125
Nelumbo nucifera chr4 3 CH_nnu_253 2 2 0.00028901
Oryza sativa ssp. japonica chr06 3 CH_osa_15 7 7 5.43983e-20
Oryza sativa ssp. japonica chr02 3 CH_osa_55 5 7 0.0000000000104929
Petunia axillaris Peaxi162Scf00069 3 CH_pax_329 2 2 0.000703556
Petunia axillaris Peaxi162Scf00106 3 CH_pax_330 2 2 0.000703556
Pisum sativum chr7LG7 3 CH_psa_373 2 2 0.000782452
Populus trichocarpa Chr03 3 CH_ptr_105 4 4 0.0000000000202774
Phaseolus vulgaris Chr10 3 CH_pvu_123 3 3 0.000000161953
Rosa chinensis RcHm_v2.0_Chr4 3 CH_rch_689 2 2 0.000398653
Rosa chinensis RcHm_v2.0_Chr3 3 CH_rch_690 2 2 0.000398653
Salix brachista GWHAAZH00000003 3 CH_sbr_61 4 4 0.0000000000262749
Schrenkiella parvula ch1-1 3 CH_spa_18 4 4 0.000000000102508
Tarenaya hassleriana NW_010961290.1 3 CH_tha_126 2 2 0.000209541
Utricularia gibba unitig_21 3 CH_ugi_5 10 59 5.93991e-19
Vigna mungo CM024079.1 3 CH_vmu_80 3 3 0.0000000626267
Zea mays 9 3 CH_zma_98 6 41 0.000000132135
Actinidia chinensis Lachesis_group9 4 CH_ach_6 6 8 2.08623e-18
Arabidopsis lyrata scaffold_1 4 CH_aly_124 3 4 0.00000146363
Amaranthus hybridus AmaHy_arrow1_Scaffold_12 4 CH_amhyb_210 2 2 0.000841751
Arabidopsis thaliana Chr1 4 CH_ath_204 3 5 0.00000103403
Arabidopsis thaliana Chr2 4 CH_ath_473 3 23 0.000182867
Brassica carinata ChrC05 4 CH_bca_130 4 4 0.00000000193544
Brassica carinata ChrC06 4 CH_bca_131 4 4 0.00000000193544
Brassica carinata ChrC07 4 CH_bca_153 4 5 0.00000000967438
Brassica carinata ChrB08 4 CH_bca_396 3 3 0.00000532583
Brassica carinata ChrB03 4 CH_bca_51 5 5 0.000000000000682674
Brassica carinata ChrC07 4 CH_bca_69 5 6 0.00000000000409483
Brassica napus A08 4 CH_bna_115 4 4 0.00000000126714
Brassica napus A09 4 CH_bna_116 4 4 0.00000000126714
Brassica napus C05 4 CH_bna_117 4 4 0.00000000126714
Brassica napus C08 4 CH_bna_118 4 4 0.00000000126714
Brassica napus C08 4 CH_bna_119 4 4 0.00000000126714
Brassica napus A06 4 CH_bna_27 6 6 1.15263e-16
Brassica oleracea C8 4 CH_bol_163 3 3 0.00000108977
Brassica oleracea C8 4 CH_bol_41 5 8 0.00000000000296526
Brassica oleracea C5 4 CH_bol_81 4 7 0.0000000087224
Brassica rapa A09 4 CH_bra_144 3 4 0.000010713
Brassica rapa A08 4 CH_bra_5 7 7 2.48522e-20
Brassica rapa A06 4 CH_bra_56 4 5 0.00000000459945
Cicer arietinum L. Ca_LG1_v3 4 CH_car_183 2 2 0.000466981
Chara braunii BFEA01000370 4 CH_cbr_85 3 11 0.0000255857
Coffea canephora chr4 4 CH_ccan_377 2 6 0.00063882
Citrus clementina scaffold_5 4 CH_ccl_84 4 4 0.0000000000248428
Ceratophyllum demersum 1 4 CH_cde_170 2 2 0.000473878
Cardamine hirsuta Chr3 4 CH_chi_187 3 5 0.0000204847
Cardamine hirsuta Chr1 4 CH_chi_82 4 5 0.0000000035411
Capsella rubella scaffold_1 4 CH_cru_61 4 4 0.000000000147763
Erigeron canadensis Conyza_canadensis_scaffold:8 4 CH_eca_55 4 9 0.00000000017074
Eutrema salsugineum scaffold_5 4 CH_esa_6 7 7 1.21685e-20
Lotus japonicus chr3 4 CH_lja_41 4 4 0.0000000000164558
Lonicera japonica GWHAAZE00000005 4 CH_lonja_437 2 2 0.000179662
Malus domestica Chr16 4 CH_mdo_175 3 3 0.0000000215706
Medicago truncatula chr4 4 CH_mtr_413 3 7 0.00000744125
Nelumbo nucifera chr4 4 CH_nnu_253 2 2 0.00028901
Oryza sativa ssp. japonica chr06 4 CH_osa_15 7 7 5.43983e-20
Oryza sativa ssp. japonica chr02 4 CH_osa_55 5 7 0.0000000000104929
Petunia axillaris Peaxi162Scf00069 4 CH_pax_329 2 2 0.000703556
Petunia axillaris Peaxi162Scf00106 4 CH_pax_330 2 2 0.000703556
Pisum sativum chr7LG7 4 CH_psa_373 2 2 0.000782452
Populus trichocarpa Chr03 4 CH_ptr_105 4 4 0.0000000000202774
Phaseolus vulgaris Chr10 4 CH_pvu_123 3 3 0.000000161953
Rosa chinensis RcHm_v2.0_Chr4 4 CH_rch_689 2 2 0.000398653
Rosa chinensis RcHm_v2.0_Chr3 4 CH_rch_690 2 2 0.000398653
Salix brachista GWHAAZH00000003 4 CH_sbr_61 4 4 0.0000000000262749
Schrenkiella parvula ch1-1 4 CH_spa_18 4 4 0.000000000102508
Tarenaya hassleriana NW_010961290.1 4 CH_tha_126 2 2 0.000209541
Utricularia gibba unitig_21 4 CH_ugi_5 10 59 5.93991e-19
Vigna mungo CM024079.1 4 CH_vmu_80 3 3 0.0000000626267
Zea mays 9 4 CH_zma_98 6 41 0.000000132135

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001