Functional clusters

Information

  • Type Gene Ontology
  • Description chitin binding

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_7 3 CH_aly_140 3 3 0.00000365965
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.01 3 CH_arhy_101 6 7 0.0000000000000170273
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.11 3 CH_arhy_81 7 9 4.58616e-17
Arabidopsis thaliana Chr4 3 CH_ath_19 9 25 1.7134e-21
Arabidopsis thaliana Chr2 3 CH_ath_36 6 10 0.0000000000000122645
Brassica carinata ChrB02 3 CH_bca_82 6 16 0.00000000002321
Camellia sinensis var. sinensis Chr6 3 CH_camsi_377 6 68 0.00000336078
Cannabis sativa NC_044377.1 3 CH_cansat_167 4 10 0.0000104531
Cannabis sativa NC_044377.1 3 CH_cansat_53 6 10 0.0000000000111997
Capsicum annuum PGAv.1.6.scaffold407 3 CH_can_142 4 4 0.0000000252884
Capsicum annuum PGAv.1.6.scaffold837 3 CH_can_259 3 3 0.0000266166
Capsicum annuum PGAv.1.6.scaffold520 3 CH_can_78 6 10 0.00000000000417462
Cicer arietinum L. Ca_LG7_v3 3 CH_car_94 4 27 0.0000584837
Corylus avellana 7 3 CH_cav_12 15 41 2.43565e-25
Coffea canephora chr6 3 CH_ccan_8 6 68 0.0000000000000254537
Citrus clementina scaffold_1 3 CH_ccl_139 4 4 0.0000000175987
Citrus clementina scaffold_8 3 CH_ccl_72 6 9 0.000000000000943379
Cardamine hirsuta Chr7 3 CH_chi_125 4 6 0.000000221901
Carya illinoinensis Chr05 3 CH_cil_202 5 13 0.000000153472
Carya illinoinensis Chr15 3 CH_cil_44 9 15 1.09006e-18
Carya illinoinensis Chr16 3 CH_cil_512 3 5 0.000761748
Citrullus lanatus CG_Chr11 3 CH_cla_76 3 3 0.00000661086
Citrullus lanatus CG_Chr06 3 CH_cla_77 3 3 0.00000661086
Cucumis melo chr02 3 CH_cme_128 3 3 0.00000373844
Carica papaya supercontig_9 3 CH_cpa_99 3 4 0.00000455395
Chenopodium quinoa C_Quinoa_Scaffold_1000 3 CH_cqu_22 8 8 1.49769e-19
Capsella rubella scaffold_7 3 CH_cru_46 5 5 0.00000000000721382
Cucumis sativus L. chr1 3 CH_csa_127 3 3 0.00000172471
Daucus carota DCARv2_Chr4 3 CH_dca_31 5 5 0.000000000000159733
Davidia involucrata GWHABJS00000013 3 CH_din_89 4 4 0.0000000134961
Durio zibethinus NW_019167882.1 3 CH_dzi_103 4 5 0.0000000985832
Durio zibethinus NW_019168159.1 3 CH_dzi_14 8 12 2.76058e-18
Durio zibethinus NW_019167915.1 3 CH_dzi_26 8 26 0.00000000000000863728
Eucalyptus grandis Chr03 3 CH_egr_34 12 15 3.24533e-29
Eucalyptus grandis Chr03 3 CH_egr_434 4 4 0.0000000673263
Fragaria x ananassa Fvb1-4 3 CH_fan_55 5 8 0.0000000000600995
Fragaria vesca Fvb1 3 CH_fve_92 5 16 0.00000000336818
Gossypium hirsutum A13 3 CH_ghi_201 4 4 0.0000000225609
Gossypium hirsutum D13 3 CH_ghi_224 4 5 0.000000112739
Gossypium hirsutum A07 3 CH_ghi_256 4 6 0.000000338021
Gossypium hirsutum D07 3 CH_ghi_395 3 3 0.0000312928
Gossypium raimondii Chr13 3 CH_gra_190 3 3 0.0000175038
Gossypium raimondii Chr07 3 CH_gra_306 3 6 0.000349477
Gossypium raimondii Chr01 3 CH_gra_62 5 5 0.00000000000883018
Helianthus annuus HanXRQChr14 3 CH_han_618 3 7 0.000317774
Hydrangea macrophylla Hma1.2p1_0028F.1 3 CH_hma_110 3 4 0.0000162829
Lupinus albus Lalb_Chr07 3 CH_lal_93 4 5 0.0000000274192
Lotus japonicus chr5 3 CH_lja_257 3 7 0.000182253
Lotus japonicus chr4 3 CH_lja_258 3 7 0.000182253
Lonicera japonica GWHAAZE00000009 3 CH_lonja_248 4 7 0.000000395144
Malus domestica Chr15 3 CH_mdo_32 7 11 1.8929e-17
Malus domestica Chr02 3 CH_mdo_354 3 4 0.000015276
Manihot esculenta Chromosome18 3 CH_mes_18 12 17 3.4874e-29
Medicago truncatula chr4 3 CH_mtr_86 6 10 0.0000000000000557847
Nelumbo nucifera chr8 3 CH_nnu_40 6 21 0.0000000000724309
Nicotiana tabacum Nitab4.5_0000416 3 CH_nta_11 5 11 0.00000000100312
Petunia axillaris Peaxi162Scf00347 3 CH_pax_22 6 11 0.000000000000485317
Punica granatum NC_045128.1 3 CH_pgr_334 3 7 0.000285882
Prunus persica Pp01 3 CH_ppe_110 5 6 0.0000000000283458
Prunus persica Pp07 3 CH_ppe_66 6 7 0.0000000000000197385
Papaver somniferum NC_039363.1 3 CH_pso_369 3 3 0.00000939604
Papaver somniferum NC_039364.1 3 CH_pso_484 3 5 0.0000938948
Populus trichocarpa Chr13 3 CH_ptr_337 3 4 0.000109295
Populus trichocarpa Chr18 3 CH_ptr_80 6 8 0.000000000000449649
Phaseolus vulgaris Chr03 3 CH_pvu_84 4 4 0.0000000028322
Quercus lobata CM012294 3 CH_qlo_10 19 40 1.79831e-35
Quercus lobata 3 3 CH_qlo_13 18 37 1.22152e-33
Quercus lobata CM012294 3 CH_qlo_982 3 3 0.000553441
Rosa chinensis RcHm_v2.0_Chr2 3 CH_rch_50 8 18 1.07881e-18
Rhododendron simsii chr01 3 CH_rsi_2 30 43 1.27961e-70
Salix brachista GWHAAZH00000018 3 CH_sbr_5 11 15 2.18818e-26
Simmondsia chinensis GWHAASQ00000023 3 CH_sci_97 3 3 0.00000311007
Sechium edule LG08 3 CH_sed_133 3 3 0.00000622998
Sequoiadendron giganteum chr8 3 CH_sgi_657 5 13 0.000000269767
Sequoiadendron giganteum chr5 3 CH_sgi_706 4 5 0.000000788443
Solanum lycopersicum SL4.0ch07 3 CH_sly_377 3 4 0.0000928542
Solanum lycopersicum SL4.0ch03 3 CH_sly_463 3 5 0.000231986
Selaginella moellendorffii scaffold_79 3 CH_smo_165 3 6 0.000528146
Solanum pennellii Spenn-ch07 3 CH_spe_114 4 5 0.0000000140214
Solanum pennellii Spenn-ch03 3 CH_spe_213 3 3 0.00000600651
Solanum tuberosum ST4.03ch03 3 CH_stu_72 6 7 0.0000000000000264327
Trochodendron aralioides group3 3 CH_tar_255 3 4 0.0000437511
Theobroma cacao Chromosome_9 3 CH_tca_22 7 11 2.01855e-16
Trifolium pratense Tp57577_TGAC_v2_LG4 3 CH_tpr_44 4 4 0.000000000644196
Tripterygium wilfordii NC_052254.1 3 CH_twi_122 4 6 0.000000459599
Tripterygium wilfordii NC_052235.1 3 CH_twi_14 8 12 7.91725e-18
Vaccinium macrocarpon chr5_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_185 3 4 0.000035213
Vigna mungo CM024074.1 3 CH_vmu_114 3 3 0.00000179112
Vitis vinifera chr11 3 CH_vvi_50 7 14 0.00000000000000404639
Arabidopsis lyrata scaffold_7 4 CH_aly_140 3 3 0.00000365965
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.01 4 CH_arhy_101 6 7 0.0000000000000170273
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.11 4 CH_arhy_81 7 9 4.58616e-17
Arabidopsis thaliana Chr4 4 CH_ath_19 9 25 1.7134e-21
Arabidopsis thaliana Chr2 4 CH_ath_36 6 10 0.0000000000000122645
Brassica carinata ChrB02 4 CH_bca_82 6 16 0.00000000002321
Camellia sinensis var. sinensis Chr6 4 CH_camsi_377 6 68 0.00000336078
Cannabis sativa NC_044377.1 4 CH_cansat_167 4 10 0.0000104531
Cannabis sativa NC_044377.1 4 CH_cansat_53 6 10 0.0000000000111997
Capsicum annuum PGAv.1.6.scaffold407 4 CH_can_142 4 4 0.0000000252884
Capsicum annuum PGAv.1.6.scaffold837 4 CH_can_259 3 3 0.0000266166
Capsicum annuum PGAv.1.6.scaffold520 4 CH_can_78 6 10 0.00000000000417462
Cicer arietinum L. Ca_LG7_v3 4 CH_car_94 4 27 0.0000584837
Corylus avellana 7 4 CH_cav_12 15 41 2.43565e-25
Coffea canephora chr6 4 CH_ccan_8 6 68 0.0000000000000254537
Citrus clementina scaffold_1 4 CH_ccl_139 4 4 0.0000000175987
Citrus clementina scaffold_8 4 CH_ccl_72 6 9 0.000000000000943379
Cardamine hirsuta Chr7 4 CH_chi_125 4 6 0.000000221901
Carya illinoinensis Chr05 4 CH_cil_202 5 13 0.000000153472
Carya illinoinensis Chr15 4 CH_cil_44 9 15 1.09006e-18
Carya illinoinensis Chr16 4 CH_cil_512 3 5 0.000761748
Citrullus lanatus CG_Chr11 4 CH_cla_76 3 3 0.00000661086
Citrullus lanatus CG_Chr06 4 CH_cla_77 3 3 0.00000661086
Cucumis melo chr02 4 CH_cme_128 3 3 0.00000373844
Carica papaya supercontig_9 4 CH_cpa_99 3 4 0.00000455395
Chenopodium quinoa C_Quinoa_Scaffold_1000 4 CH_cqu_22 8 8 1.49769e-19
Capsella rubella scaffold_7 4 CH_cru_46 5 5 0.00000000000721382
Cucumis sativus L. chr1 4 CH_csa_127 3 3 0.00000172471
Daucus carota DCARv2_Chr4 4 CH_dca_31 5 5 0.000000000000159733
Davidia involucrata GWHABJS00000013 4 CH_din_89 4 4 0.0000000134961
Durio zibethinus NW_019167882.1 4 CH_dzi_103 4 5 0.0000000985832
Durio zibethinus NW_019168159.1 4 CH_dzi_14 8 12 2.76058e-18
Durio zibethinus NW_019167915.1 4 CH_dzi_26 8 26 0.00000000000000863728
Eucalyptus grandis Chr03 4 CH_egr_34 12 15 3.24533e-29
Eucalyptus grandis Chr03 4 CH_egr_434 4 4 0.0000000673263
Fragaria x ananassa Fvb1-4 4 CH_fan_55 5 8 0.0000000000600995
Fragaria vesca Fvb1 4 CH_fve_92 5 16 0.00000000336818
Gossypium hirsutum A13 4 CH_ghi_201 4 4 0.0000000225609
Gossypium hirsutum D13 4 CH_ghi_224 4 5 0.000000112739
Gossypium hirsutum A07 4 CH_ghi_256 4 6 0.000000338021
Gossypium hirsutum D07 4 CH_ghi_395 3 3 0.0000312928
Gossypium raimondii Chr13 4 CH_gra_190 3 3 0.0000175038
Gossypium raimondii Chr07 4 CH_gra_306 3 6 0.000349477
Gossypium raimondii Chr01 4 CH_gra_62 5 5 0.00000000000883018
Helianthus annuus HanXRQChr14 4 CH_han_618 3 7 0.000317774
Hydrangea macrophylla Hma1.2p1_0028F.1 4 CH_hma_110 3 4 0.0000162829
Lupinus albus Lalb_Chr07 4 CH_lal_93 4 5 0.0000000274192
Lotus japonicus chr5 4 CH_lja_257 3 7 0.000182253
Lotus japonicus chr4 4 CH_lja_258 3 7 0.000182253
Lonicera japonica GWHAAZE00000009 4 CH_lonja_248 4 7 0.000000395144
Malus domestica Chr15 4 CH_mdo_32 7 11 1.8929e-17
Malus domestica Chr02 4 CH_mdo_354 3 4 0.000015276
Manihot esculenta Chromosome18 4 CH_mes_18 12 17 3.4874e-29
Medicago truncatula chr4 4 CH_mtr_86 6 10 0.0000000000000557847
Nelumbo nucifera chr8 4 CH_nnu_40 6 21 0.0000000000724309
Nicotiana tabacum Nitab4.5_0000416 4 CH_nta_11 5 11 0.00000000100312
Petunia axillaris Peaxi162Scf00347 4 CH_pax_22 6 11 0.000000000000485317
Punica granatum NC_045128.1 4 CH_pgr_334 3 7 0.000285882
Prunus persica Pp01 4 CH_ppe_110 5 6 0.0000000000283458
Prunus persica Pp07 4 CH_ppe_66 6 7 0.0000000000000197385
Papaver somniferum NC_039363.1 4 CH_pso_369 3 3 0.00000939604
Papaver somniferum NC_039364.1 4 CH_pso_484 3 5 0.0000938948
Populus trichocarpa Chr13 4 CH_ptr_337 3 4 0.000109295
Populus trichocarpa Chr18 4 CH_ptr_80 6 8 0.000000000000449649
Phaseolus vulgaris Chr03 4 CH_pvu_84 4 4 0.0000000028322
Quercus lobata CM012294 4 CH_qlo_10 19 40 1.79831e-35
Quercus lobata 3 4 CH_qlo_13 18 37 1.22152e-33
Quercus lobata CM012294 4 CH_qlo_982 3 3 0.000553441
Rosa chinensis RcHm_v2.0_Chr2 4 CH_rch_50 8 18 1.07881e-18
Rhododendron simsii chr01 4 CH_rsi_2 30 43 1.27961e-70
Salix brachista GWHAAZH00000018 4 CH_sbr_5 11 15 2.18818e-26
Simmondsia chinensis GWHAASQ00000023 4 CH_sci_97 3 3 0.00000311007
Sechium edule LG08 4 CH_sed_133 3 3 0.00000622998
Sequoiadendron giganteum chr8 4 CH_sgi_657 5 13 0.000000269767
Sequoiadendron giganteum chr5 4 CH_sgi_706 4 5 0.000000788443
Solanum lycopersicum SL4.0ch07 4 CH_sly_377 3 4 0.0000928542
Solanum lycopersicum SL4.0ch03 4 CH_sly_463 3 5 0.000231986
Selaginella moellendorffii scaffold_79 4 CH_smo_165 3 6 0.000528146
Solanum pennellii Spenn-ch07 4 CH_spe_114 4 5 0.0000000140214
Solanum pennellii Spenn-ch03 4 CH_spe_213 3 3 0.00000600651
Solanum tuberosum ST4.03ch03 4 CH_stu_72 6 7 0.0000000000000264327
Trochodendron aralioides group3 4 CH_tar_255 3 4 0.0000437511
Theobroma cacao Chromosome_9 4 CH_tca_22 7 11 2.01855e-16
Trifolium pratense Tp57577_TGAC_v2_LG4 4 CH_tpr_44 4 4 0.000000000644196
Tripterygium wilfordii NC_052254.1 4 CH_twi_122 4 6 0.000000459599
Tripterygium wilfordii NC_052235.1 4 CH_twi_14 8 12 7.91725e-18
Vaccinium macrocarpon chr5_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_185 3 4 0.000035213
Vigna mungo CM024074.1 4 CH_vmu_114 3 3 0.00000179112
Vitis vinifera chr11 4 CH_vvi_50 7 14 0.00000000000000404639

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001