Functional clusters

Information

  • Type Gene Ontology
  • Description circadian rhythm

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Lactuca sativa Lsat_1_v8_lg_3 3 CH_lsa_159 5 5 0.0000000234613
Petunia axillaris Peaxi162Scf00825 3 CH_pax_135 5 9 0.00000335609
Lactuca sativa Lsat_1_v8_lg_3 4 CH_lsa_159 5 5 0.0000000234613
Petunia axillaris Peaxi162Scf00825 4 CH_pax_135 5 9 0.00000335609

Available child term results

Ontology identifier Description Number of clusters
GO:0009649 entrainment of circadian clock 2
GO:0010378 temperature compensation of the circadian clock 2
GO:0032922 circadian regulation of gene expression 2
GO:0042752 regulation of circadian rhythm 20
GO:0042753 positive regulation of circadian rhythm 6
GO:0042754 negative regulation of circadian rhythm 10
GO:0043153 entrainment of circadian clock by photoperiod 10
GO:0097167 circadian regulation of translation 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001