Functional clusters
Information
- Type Gene Ontology
- Description small GTPase mediated signal transduction
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica carinata | ChrC05 | 3 | CH_bca_562 | 3 | 3 | 0.000065311 |
| Magnolia biondii | Chr14 | 3 | CH_mbi_366 | 3 | 3 | 0.0000211719 |
| Petunia axillaris | Peaxi162Scf01205 | 3 | CH_pax_350 | 3 | 7 | 0.000849003 |
| Salvia bowleyana | GWHASIU00000006 | 3 | CH_sbo_313 | 4 | 19 | 0.0000444487 |
| Sequoiadendron giganteum | chr11 | 3 | CH_sgi_800 | 3 | 3 | 0.00000473458 |
| Brassica carinata | ChrC05 | 4 | CH_bca_562 | 3 | 3 | 0.000065311 |
| Magnolia biondii | Chr14 | 4 | CH_mbi_366 | 3 | 3 | 0.0000211719 |
| Petunia axillaris | Peaxi162Scf01205 | 4 | CH_pax_350 | 3 | 7 | 0.000849003 |
| Salvia bowleyana | GWHASIU00000006 | 4 | CH_sbo_313 | 4 | 19 | 0.0000444487 |
| Sequoiadendron giganteum | chr11 | 4 | CH_sgi_800 | 3 | 3 | 0.00000473458 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0032012 | regulation of ARF protein signal transduction | 10 |
| GO:0035024 | negative regulation of Rho protein signal transduction | 2 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |