Functional clusters

Information

  • Type Gene Ontology
  • Description cellular response to nitrogen starvation

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr2 3 CH_acertr_174 4 8 0.00000065009
Gossypium hirsutum A01 3 CH_ghi_28 10 15 1.32072e-23
Gossypium hirsutum D01 3 CH_ghi_42 8 10 4.03555e-19
Gossypium raimondii Chr02 3 CH_gra_20 8 10 1.8965e-19
Lactuca sativa Lsat_1_v8_lg_7 3 CH_lsa_263 3 3 0.00000701873
Solanum lycopersicum SL4.0ch07 3 CH_sly_300 3 3 0.0000188826
Solanum pennellii Spenn-ch07 3 CH_spe_97 4 4 0.0000000033397
Solanum tuberosum ST4.03ch07 3 CH_stu_327 3 3 0.0000159932
Theobroma cacao Chromosome_7 3 CH_tca_90 5 8 0.00000000051278
Acer truncatum chr2 4 CH_acertr_174 4 8 0.00000065009
Gossypium hirsutum A01 4 CH_ghi_28 10 15 1.32072e-23
Gossypium hirsutum D01 4 CH_ghi_42 8 10 4.03555e-19
Gossypium raimondii Chr02 4 CH_gra_20 8 10 1.8965e-19
Lactuca sativa Lsat_1_v8_lg_7 4 CH_lsa_263 3 3 0.00000701873
Solanum lycopersicum SL4.0ch07 4 CH_sly_300 3 3 0.0000188826
Solanum pennellii Spenn-ch07 4 CH_spe_97 4 4 0.0000000033397
Solanum tuberosum ST4.03ch07 4 CH_stu_327 3 3 0.0000159932
Theobroma cacao Chromosome_7 4 CH_tca_90 5 8 0.00000000051278

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001