Functional clusters
Information
- Type Gene Ontology
- Description intracellular sequestering of iron ion
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | sc-18 | 3 | CH_aar_270 | 2 | 2 | 0.000912326 |
| Acer truncatum | chr11 | 3 | CH_acertr_77 | 4 | 10 | 0.00000000330941 |
| Aquilegia oxysepala | CHR05 | 3 | CH_aox_87 | 4 | 26 | 0.00000034627 |
| Cannabis sativa | NC_044376.1 | 3 | CH_cansat_351 | 2 | 2 | 0.000656642 |
| Capsicum annuum | PGAv.1.6.scaffold523 | 3 | CH_can_160 | 3 | 3 | 0.000000102372 |
| Corylus avellana | 9 | 3 | CH_cav_422 | 2 | 2 | 0.000766695 |
| Citrus clementina | scaffold_2 | 3 | CH_ccl_401 | 2 | 2 | 0.000492187 |
| Cucumis melo | chr09 | 3 | CH_cme_273 | 2 | 2 | 0.000667111 |
| Carica papaya | supercontig_2 | 3 | CH_cpa_283 | 2 | 3 | 0.000855527 |
| Davidia involucrata | GWHABJS00000005 | 3 | CH_din_60 | 5 | 20 | 0.0000000000406914 |
| Durio zibethinus | NW_019167915.1 | 3 | CH_dzi_76 | 4 | 6 | 0.00000000221726 |
| Erigeron canadensis | Conyza_canadensis_scaffold:4 | 3 | CH_eca_35 | 4 | 4 | 0.00000000000948749 |
| Eucalyptus grandis | Chr09 | 3 | CH_egr_472 | 3 | 3 | 0.000000287747 |
| Erythranthe guttata | scaffold_2 | 3 | CH_egut_414 | 2 | 2 | 0.000728147 |
| Helianthus annuus | HanXRQChr11 | 3 | CH_han_275 | 5 | 53 | 0.000000293996 |
| Lonicera japonica | GWHAAZE00000005 | 3 | CH_lonja_563 | 2 | 2 | 0.000598874 |
| Lactuca sativa | Lsat_1_v8_lg_7 | 3 | CH_lsa_286 | 3 | 6 | 0.0000130713 |
| Nelumbo nucifera | chr3 | 3 | CH_nnu_123 | 3 | 4 | 0.00000116925 |
| Olea europaea | chr15 | 3 | CH_oeu_81 | 3 | 4 | 0.000000598306 |
| Prunus persica | Pp01 | 3 | CH_ppe_433 | 2 | 2 | 0.000447577 |
| Populus trichocarpa | Chr10 | 3 | CH_ptr_434 | 2 | 2 | 0.000578001 |
| Phaseolus vulgaris | Chr02 | 3 | CH_pvu_207 | 3 | 9 | 0.0000237861 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 3 | CH_rch_320 | 3 | 5 | 0.000000476719 |
| Salvia bowleyana | GWHASIU00000003 | 3 | CH_sbo_95 | 5 | 21 | 0.0000000000137224 |
| Sechium edule | LG11 | 3 | CH_sed_278 | 2 | 2 | 0.000713419 |
| Solanum lycopersicum | SL4.0ch01 | 3 | CH_sly_70 | 5 | 6 | 0.00000000000106911 |
| Solanum pennellii | Spenn-ch01 | 3 | CH_spe_30 | 5 | 6 | 0.00000000000000986385 |
| Solanum tuberosum | ST4.03ch01 | 3 | CH_stu_56 | 6 | 8 | 0.00000000000000111412 |
| Vitis vinifera | chr1 | 3 | CH_vvi_417 | 2 | 2 | 0.00076063 |
| Vitis vinifera | chr12 | 3 | CH_vvi_418 | 2 | 2 | 0.00076063 |
| Aethionema arabicum | sc-18 | 4 | CH_aar_270 | 2 | 2 | 0.000912326 |
| Acer truncatum | chr11 | 4 | CH_acertr_77 | 4 | 10 | 0.00000000330941 |
| Aquilegia oxysepala | CHR05 | 4 | CH_aox_87 | 4 | 26 | 0.00000034627 |
| Cannabis sativa | NC_044376.1 | 4 | CH_cansat_351 | 2 | 2 | 0.000656642 |
| Capsicum annuum | PGAv.1.6.scaffold523 | 4 | CH_can_160 | 3 | 3 | 0.000000102372 |
| Corylus avellana | 9 | 4 | CH_cav_422 | 2 | 2 | 0.000766695 |
| Citrus clementina | scaffold_2 | 4 | CH_ccl_401 | 2 | 2 | 0.000492187 |
| Cucumis melo | chr09 | 4 | CH_cme_273 | 2 | 2 | 0.000667111 |
| Carica papaya | supercontig_2 | 4 | CH_cpa_283 | 2 | 3 | 0.000855527 |
| Davidia involucrata | GWHABJS00000005 | 4 | CH_din_60 | 5 | 20 | 0.0000000000406914 |
| Durio zibethinus | NW_019167915.1 | 4 | CH_dzi_76 | 4 | 6 | 0.00000000221726 |
| Erigeron canadensis | Conyza_canadensis_scaffold:4 | 4 | CH_eca_35 | 4 | 4 | 0.00000000000948749 |
| Eucalyptus grandis | Chr09 | 4 | CH_egr_472 | 3 | 3 | 0.000000287747 |
| Erythranthe guttata | scaffold_2 | 4 | CH_egut_414 | 2 | 2 | 0.000728147 |
| Helianthus annuus | HanXRQChr11 | 4 | CH_han_275 | 5 | 53 | 0.000000293996 |
| Lonicera japonica | GWHAAZE00000005 | 4 | CH_lonja_563 | 2 | 2 | 0.000598874 |
| Lactuca sativa | Lsat_1_v8_lg_7 | 4 | CH_lsa_286 | 3 | 6 | 0.0000130713 |
| Nelumbo nucifera | chr3 | 4 | CH_nnu_123 | 3 | 4 | 0.00000116925 |
| Olea europaea | chr15 | 4 | CH_oeu_81 | 3 | 4 | 0.000000598306 |
| Prunus persica | Pp01 | 4 | CH_ppe_433 | 2 | 2 | 0.000447577 |
| Populus trichocarpa | Chr10 | 4 | CH_ptr_434 | 2 | 2 | 0.000578001 |
| Phaseolus vulgaris | Chr02 | 4 | CH_pvu_207 | 3 | 9 | 0.0000237861 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 4 | CH_rch_320 | 3 | 5 | 0.000000476719 |
| Salvia bowleyana | GWHASIU00000003 | 4 | CH_sbo_95 | 5 | 21 | 0.0000000000137224 |
| Sechium edule | LG11 | 4 | CH_sed_278 | 2 | 2 | 0.000713419 |
| Solanum lycopersicum | SL4.0ch01 | 4 | CH_sly_70 | 5 | 6 | 0.00000000000106911 |
| Solanum pennellii | Spenn-ch01 | 4 | CH_spe_30 | 5 | 6 | 0.00000000000000986385 |
| Solanum tuberosum | ST4.03ch01 | 4 | CH_stu_56 | 6 | 8 | 0.00000000000000111412 |
| Vitis vinifera | chr1 | 4 | CH_vvi_417 | 2 | 2 | 0.00076063 |
| Vitis vinifera | chr12 | 4 | CH_vvi_418 | 2 | 2 | 0.00076063 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |