Functional clusters

Information

  • Type Gene Ontology
  • Description porphyrin-containing compound metabolic process

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrB06 3 CH_bca_528 3 4 0.0000537173
Brassica carinata ChrB06 4 CH_bca_528 3 4 0.0000537173

Available child term results

Ontology identifier Description Number of clusters
GO:0006780 uroporphyrinogen III biosynthetic process 4
GO:0006784 heme A biosynthetic process 22
GO:0006788 heme oxidation 2
GO:0015994 chlorophyll metabolic process 2
GO:0015995 chlorophyll biosynthetic process 4
GO:0019354 siroheme biosynthetic process 2
GO:0042167 heme catabolic process 4
GO:0042168 heme metabolic process 2
GO:0070455 positive regulation of heme biosynthetic process 4
GO:0090056 regulation of chlorophyll metabolic process 2
GO:1903647 negative regulation of chlorophyll catabolic process 10

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001