Functional clusters
Information
- Type Gene Ontology
- Description mannose metabolic process
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr3 | 3 | CH_acertr_269 | 3 | 9 | 0.0000350331 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_3 | 3 | CH_amhyb_49 | 3 | 3 | 0.000000106286 |
| Aquilegia oxysepala | CHR05 | 3 | CH_aox_81 | 3 | 3 | 0.000000192964 |
| Brassica carinata | ChrB01 | 3 | CH_bca_278 | 3 | 4 | 0.000000328987 |
| Camellia sinensis var. sinensis | Chr2 | 3 | CH_camsi_268 | 3 | 3 | 0.000000176627 |
| Cannabis sativa | NC_044379.1 | 3 | CH_cansat_346 | 2 | 2 | 0.000656642 |
| Ceratophyllum demersum | 5 | 3 | CH_cde_189 | 2 | 2 | 0.000473878 |
| Corchorus olitorius | AWUE01015160.1 | 3 | CH_col_35 | 3 | 4 | 0.00000051193 |
| Carica papaya | supercontig_70 | 3 | CH_cpa_62 | 3 | 3 | 0.00000013557 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3489 | 3 | CH_cqu_204 | 3 | 4 | 0.00000113139 |
| Eucalyptus grandis | Chr10 | 3 | CH_egr_126 | 6 | 6 | 7.14084e-18 |
| Fragaria x ananassa | Fvb1-1 | 3 | CH_fan_129 | 4 | 10 | 0.0000000596094 |
| Helianthus annuus | HanXRQChr16 | 3 | CH_han_287 | 3 | 3 | 0.000000369592 |
| Lotus japonicus | chr1 | 3 | CH_lja_356 | 2 | 2 | 0.000715077 |
| Magnolia biondii | Chr12 | 3 | CH_mbi_392 | 3 | 12 | 0.0000435439 |
| Medicago truncatula | chr7 | 3 | CH_mtr_756 | 2 | 2 | 0.000862813 |
| Nelumbo nucifera | chr4 | 3 | CH_nnu_264 | 2 | 2 | 0.00028901 |
| Prasinoderma coloniale | Chr3 | 3 | CH_pco_14 | 2 | 2 | 0.000837404 |
| Prunus persica | Pp03 | 3 | CH_ppe_472 | 2 | 2 | 0.000745962 |
| Quercus lobata | 10 | 3 | CH_qlo_532 | 3 | 3 | 0.00000145542 |
| Quercus lobata | 6 | 3 | CH_qlo_533 | 3 | 3 | 0.00000145542 |
| Quercus lobata | CM012294 | 3 | CH_qlo_762 | 3 | 8 | 0.0000814065 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 3 | CH_rch_236 | 4 | 12 | 0.0000000197403 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 3 | CH_rch_302 | 3 | 3 | 0.000000286069 |
| Salvia bowleyana | GWHASIU00000008 | 3 | CH_sbo_420 | 2 | 2 | 0.000272988 |
| Simmondsia chinensis | GWHAASQ00000007 | 3 | CH_sci_247 | 2 | 2 | 0.000510856 |
| Sequoiadendron giganteum | chr5 | 3 | CH_sgi_111 | 9 | 24 | 5.41446e-21 |
| Sequoiadendron giganteum | chr8 | 3 | CH_sgi_210 | 6 | 9 | 0.0000000000000140599 |
| Sapria himalayana | scaffold13_12996478 | 3 | CH_shi_235 | 2 | 3 | 0.000514599 |
| Trochodendron aralioides | group13 | 3 | CH_tar_51 | 4 | 4 | 0.000000000081805 |
| Theobroma cacao | Chromosome_4 | 3 | CH_tca_391 | 2 | 2 | 0.000732386 |
| Trifolium pratense | Tp57577_TGAC_v2_LG4 | 3 | CH_tpr_332 | 2 | 2 | 0.000454184 |
| Tripterygium wilfordii | NC_052254.1 | 3 | CH_twi_332 | 2 | 2 | 0.00083682 |
| Vaccinium macrocarpon | chr12_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_356 | 3 | 31 | 0.000580339 |
| Zea mays | 1 | 3 | CH_zma_173 | 3 | 8 | 0.0000263329 |
| Acer truncatum | chr3 | 4 | CH_acertr_269 | 3 | 9 | 0.0000350331 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_3 | 4 | CH_amhyb_49 | 3 | 3 | 0.000000106286 |
| Aquilegia oxysepala | CHR05 | 4 | CH_aox_81 | 3 | 3 | 0.000000192964 |
| Brassica carinata | ChrB01 | 4 | CH_bca_278 | 3 | 4 | 0.000000328987 |
| Camellia sinensis var. sinensis | Chr2 | 4 | CH_camsi_268 | 3 | 3 | 0.000000176627 |
| Cannabis sativa | NC_044379.1 | 4 | CH_cansat_346 | 2 | 2 | 0.000656642 |
| Ceratophyllum demersum | 5 | 4 | CH_cde_189 | 2 | 2 | 0.000473878 |
| Corchorus olitorius | AWUE01015160.1 | 4 | CH_col_35 | 3 | 4 | 0.00000051193 |
| Carica papaya | supercontig_70 | 4 | CH_cpa_62 | 3 | 3 | 0.00000013557 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3489 | 4 | CH_cqu_204 | 3 | 4 | 0.00000113139 |
| Eucalyptus grandis | Chr10 | 4 | CH_egr_126 | 6 | 6 | 7.14084e-18 |
| Fragaria x ananassa | Fvb1-1 | 4 | CH_fan_129 | 4 | 10 | 0.0000000596094 |
| Helianthus annuus | HanXRQChr16 | 4 | CH_han_287 | 3 | 3 | 0.000000369592 |
| Lotus japonicus | chr1 | 4 | CH_lja_356 | 2 | 2 | 0.000715077 |
| Magnolia biondii | Chr12 | 4 | CH_mbi_392 | 3 | 12 | 0.0000435439 |
| Medicago truncatula | chr7 | 4 | CH_mtr_756 | 2 | 2 | 0.000862813 |
| Nelumbo nucifera | chr4 | 4 | CH_nnu_264 | 2 | 2 | 0.00028901 |
| Prasinoderma coloniale | Chr3 | 4 | CH_pco_14 | 2 | 2 | 0.000837404 |
| Prunus persica | Pp03 | 4 | CH_ppe_472 | 2 | 2 | 0.000745962 |
| Quercus lobata | 10 | 4 | CH_qlo_532 | 3 | 3 | 0.00000145542 |
| Quercus lobata | 6 | 4 | CH_qlo_533 | 3 | 3 | 0.00000145542 |
| Quercus lobata | CM012294 | 4 | CH_qlo_762 | 3 | 8 | 0.0000814065 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 4 | CH_rch_236 | 4 | 12 | 0.0000000197403 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 4 | CH_rch_302 | 3 | 3 | 0.000000286069 |
| Salvia bowleyana | GWHASIU00000008 | 4 | CH_sbo_420 | 2 | 2 | 0.000272988 |
| Simmondsia chinensis | GWHAASQ00000007 | 4 | CH_sci_247 | 2 | 2 | 0.000510856 |
| Sequoiadendron giganteum | chr5 | 4 | CH_sgi_111 | 9 | 24 | 5.41446e-21 |
| Sequoiadendron giganteum | chr8 | 4 | CH_sgi_210 | 6 | 9 | 0.0000000000000140599 |
| Sapria himalayana | scaffold13_12996478 | 4 | CH_shi_235 | 2 | 3 | 0.000514599 |
| Trochodendron aralioides | group13 | 4 | CH_tar_51 | 4 | 4 | 0.000000000081805 |
| Theobroma cacao | Chromosome_4 | 4 | CH_tca_391 | 2 | 2 | 0.000732386 |
| Trifolium pratense | Tp57577_TGAC_v2_LG4 | 4 | CH_tpr_332 | 2 | 2 | 0.000454184 |
| Tripterygium wilfordii | NC_052254.1 | 4 | CH_twi_332 | 2 | 2 | 0.00083682 |
| Vaccinium macrocarpon | chr12_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_356 | 3 | 31 | 0.000580339 |
| Zea mays | 1 | 4 | CH_zma_173 | 3 | 8 | 0.0000263329 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |