Functional clusters

Information

  • Type Gene Ontology
  • Description mRNA cleavage and polyadenylation specificity factor complex

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group3 3 CH_ach_181 2 2 0.000162964
Arabidopsis lyrata scaffold_6 3 CH_aly_76 3 4 0.0000000261395
Coffea canephora chr2 3 CH_ccan_172 2 3 0.0000127767
Glycine max Gm11 3 CH_gma_23 6 9 4.16889e-18
Lonicera japonica GWHAAZE00000001 3 CH_lonja_449 2 2 0.000179662
Micromonas commoda Chr_01 3 CH_mco_17 2 2 0.000197961
Rosa chinensis RcHm_v2.0_Chr1 3 CH_rch_366 4 66 0.00000204829
Rosa chinensis RcHm_v2.0_Chr1 3 CH_rch_734 2 2 0.000597979
Sequoiadendron giganteum chr7 3 CH_sgi_975 2 2 0.0000487151
Sapria himalayana scaffold10_15062905 3 CH_shi_14 4 4 0.00000000000056092
Theobroma cacao Chromosome_3 3 CH_tca_317 2 3 0.000219708
Vigna mungo CM024077.1 3 CH_vmu_187 2 2 0.0000646141
Actinidia chinensis Lachesis_group3 4 CH_ach_181 2 2 0.000162964
Arabidopsis lyrata scaffold_6 4 CH_aly_76 3 4 0.0000000261395
Coffea canephora chr2 4 CH_ccan_172 2 3 0.0000127767
Glycine max Gm11 4 CH_gma_23 6 9 4.16889e-18
Lonicera japonica GWHAAZE00000001 4 CH_lonja_449 2 2 0.000179662
Micromonas commoda Chr_01 4 CH_mco_17 2 2 0.000197961
Rosa chinensis RcHm_v2.0_Chr1 4 CH_rch_366 4 66 0.00000204829
Rosa chinensis RcHm_v2.0_Chr1 4 CH_rch_734 2 2 0.000597979
Sequoiadendron giganteum chr7 4 CH_sgi_975 2 2 0.0000487151
Sapria himalayana scaffold10_15062905 4 CH_shi_14 4 4 0.00000000000056092
Theobroma cacao Chromosome_3 4 CH_tca_317 2 3 0.000219708
Vigna mungo CM024077.1 4 CH_vmu_187 2 2 0.0000646141

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001