Functional clusters
Information
- Type Gene Ontology
- Description pericentric heterochromatin
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Capsella rubella | scaffold_8 | 3 | CH_cru_274 | 2 | 2 | 0.000219346 |
| Eutrema salsugineum | scaffold_2 | 3 | CH_esa_202 | 2 | 2 | 0.00022845 |
| Glycine max | Gm15 | 3 | CH_gma_155 | 3 | 3 | 0.0000000756348 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 3 | CH_lsa_209 | 3 | 5 | 0.000000396264 |
| Physcomitrium patens | Chr05 | 3 | CH_ppa_212 | 2 | 2 | 0.000612726 |
| Pisum sativum | chr7LG7 | 3 | CH_psa_94 | 3 | 3 | 0.000000081633 |
| Sequoiadendron giganteum | chr5 | 3 | CH_sgi_1129 | 2 | 2 | 0.000146145 |
| Trifolium pratense | Tp57577_TGAC_v2_LG7 | 3 | CH_tpr_89 | 3 | 4 | 0.000000137518 |
| Capsella rubella | scaffold_8 | 4 | CH_cru_274 | 2 | 2 | 0.000219346 |
| Eutrema salsugineum | scaffold_2 | 4 | CH_esa_202 | 2 | 2 | 0.00022845 |
| Glycine max | Gm15 | 4 | CH_gma_155 | 3 | 3 | 0.0000000756348 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 4 | CH_lsa_209 | 3 | 5 | 0.000000396264 |
| Physcomitrium patens | Chr05 | 4 | CH_ppa_212 | 2 | 2 | 0.000612726 |
| Pisum sativum | chr7LG7 | 4 | CH_psa_94 | 3 | 3 | 0.000000081633 |
| Sequoiadendron giganteum | chr5 | 4 | CH_sgi_1129 | 2 | 2 | 0.000146145 |
| Trifolium pratense | Tp57577_TGAC_v2_LG7 | 4 | CH_tpr_89 | 3 | 4 | 0.000000137518 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |