Functional clusters
Information
- Type Gene Ontology
- Description spliceosomal complex
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-10 | 3 | CH_aar_187 | 3 | 5 | 0.000252323 |
| Aquilegia oxysepala | CHR01 | 3 | CH_aox_284 | 3 | 6 | 0.000563129 |
| Brassica carinata | ChrB02 | 3 | CH_bca_380 | 4 | 9 | 0.00000378749 |
| Brassica napus | C05 | 3 | CH_bna_430 | 3 | 3 | 0.0000586907 |
| Brassica oleracea | C4 | 3 | CH_bol_389 | 3 | 7 | 0.000794243 |
| Camellia sinensis var. sinensis | Chr2 | 3 | CH_camsi_272 | 5 | 16 | 0.00000019681 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2689 | 3 | CH_cqu_447 | 3 | 4 | 0.000297437 |
| Davidia involucrata | GWHABJS00000019 | 3 | CH_din_200 | 3 | 3 | 0.0000122915 |
| Fragaria x ananassa | Fvb6-3 | 3 | CH_fan_146 | 4 | 4 | 0.000000166942 |
| Fragaria x ananassa | Fvb6-2 | 3 | CH_fan_147 | 4 | 4 | 0.000000166942 |
| Gossypium hirsutum | A05 | 3 | CH_ghi_214 | 4 | 4 | 0.0000000694201 |
| Helianthus annuus | HanXRQChr16 | 3 | CH_han_117 | 5 | 5 | 0.0000000000181644 |
| Helianthus annuus | HanXRQChr08 | 3 | CH_han_433 | 3 | 3 | 0.0000296659 |
| Lupinus albus | Lalb_Chr10 | 3 | CH_lal_358 | 3 | 3 | 0.000501941 |
| Malus domestica | Chr09 | 3 | CH_mdo_189 | 4 | 4 | 0.0000000408844 |
| Malus domestica | Chr09 | 3 | CH_mdo_417 | 3 | 3 | 0.0000449208 |
| Papaver somniferum | NW_020634374.1 | 3 | CH_pso_305 | 4 | 7 | 0.000000811586 |
| Sechium edule | LG06 | 3 | CH_sed_192 | 4 | 17 | 0.000134147 |
| Solanum tuberosum | ST4.03ch07 | 3 | CH_stu_427 | 5 | 17 | 0.000115564 |
| Trochodendron aralioides | group10 | 3 | CH_tar_244 | 3 | 3 | 0.000032354 |
| Utricularia gibba | unitig_747 | 3 | CH_ugi_52 | 3 | 3 | 0.0000262553 |
| Aethionema arabicum | LG-10 | 4 | CH_aar_187 | 3 | 5 | 0.000252323 |
| Aquilegia oxysepala | CHR01 | 4 | CH_aox_284 | 3 | 6 | 0.000563129 |
| Brassica carinata | ChrB02 | 4 | CH_bca_380 | 4 | 9 | 0.00000378749 |
| Brassica napus | C05 | 4 | CH_bna_430 | 3 | 3 | 0.0000586907 |
| Brassica oleracea | C4 | 4 | CH_bol_389 | 3 | 7 | 0.000794243 |
| Camellia sinensis var. sinensis | Chr2 | 4 | CH_camsi_272 | 5 | 16 | 0.00000019681 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2689 | 4 | CH_cqu_447 | 3 | 4 | 0.000297437 |
| Davidia involucrata | GWHABJS00000019 | 4 | CH_din_200 | 3 | 3 | 0.0000122915 |
| Fragaria x ananassa | Fvb6-3 | 4 | CH_fan_146 | 4 | 4 | 0.000000166942 |
| Fragaria x ananassa | Fvb6-2 | 4 | CH_fan_147 | 4 | 4 | 0.000000166942 |
| Gossypium hirsutum | A05 | 4 | CH_ghi_214 | 4 | 4 | 0.0000000694201 |
| Helianthus annuus | HanXRQChr16 | 4 | CH_han_117 | 5 | 5 | 0.0000000000181644 |
| Helianthus annuus | HanXRQChr08 | 4 | CH_han_433 | 3 | 3 | 0.0000296659 |
| Lupinus albus | Lalb_Chr10 | 4 | CH_lal_358 | 3 | 3 | 0.000501941 |
| Malus domestica | Chr09 | 4 | CH_mdo_189 | 4 | 4 | 0.0000000408844 |
| Malus domestica | Chr09 | 4 | CH_mdo_417 | 3 | 3 | 0.0000449208 |
| Papaver somniferum | NW_020634374.1 | 4 | CH_pso_305 | 4 | 7 | 0.000000811586 |
| Sechium edule | LG06 | 4 | CH_sed_192 | 4 | 17 | 0.000134147 |
| Solanum tuberosum | ST4.03ch07 | 4 | CH_stu_427 | 5 | 17 | 0.000115564 |
| Trochodendron aralioides | group10 | 4 | CH_tar_244 | 3 | 3 | 0.000032354 |
| Utricularia gibba | unitig_747 | 4 | CH_ugi_52 | 3 | 3 | 0.0000262553 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0005689 | U12-type spliceosomal complex | 14 |
| GO:0071006 | U2-type catalytic step 1 spliceosome | 2 |
| GO:0071013 | catalytic step 2 spliceosome | 10 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |