Functional clusters
Information
- Type Gene Ontology
- Description transcription factor TFIID complex
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Anthoceros agrestis | Sc2ySwM_368 | 3 | CH_aag_126 | 3 | 9 | 0.000231648 |
| Acer truncatum | chr9 | 3 | CH_acertr_204 | 3 | 3 | 0.00000339203 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.09 | 3 | CH_arhy_405 | 3 | 3 | 0.00000959955 |
| Brassica oleracea | C4 | 3 | CH_bol_175 | 3 | 3 | 0.00000182697 |
| Camellia sinensis var. sinensis | Chr9 | 3 | CH_camsi_456 | 4 | 22 | 0.0000223275 |
| Corylus avellana | 7 | 3 | CH_cav_93 | 4 | 5 | 0.0000000261924 |
| Carica papaya | supercontig_13 | 3 | CH_cpa_255 | 3 | 8 | 0.00051484 |
| Fragaria x ananassa | Fvb7-3 | 3 | CH_fan_378 | 3 | 5 | 0.00010688 |
| Gossypium hirsutum | D07 | 3 | CH_ghi_177 | 4 | 4 | 0.00000000469775 |
| Helianthus annuus | HanXRQChr17 | 3 | CH_han_505 | 4 | 45 | 0.0000989546 |
| Lonicera japonica | GWHAAZE00000009 | 3 | CH_lonja_347 | 3 | 3 | 0.0000175536 |
| Magnolia biondii | Chr15 | 3 | CH_mbi_515 | 3 | 16 | 0.00023729 |
| Rhododendron simsii | chr12 | 3 | CH_rsi_278 | 3 | 3 | 0.00000424763 |
| Sapria himalayana | scaffold32_6892495 | 3 | CH_shi_139 | 3 | 8 | 0.0000452726 |
| Anthoceros agrestis | Sc2ySwM_368 | 4 | CH_aag_126 | 3 | 9 | 0.000231648 |
| Acer truncatum | chr9 | 4 | CH_acertr_204 | 3 | 3 | 0.00000339203 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.09 | 4 | CH_arhy_405 | 3 | 3 | 0.00000959955 |
| Brassica oleracea | C4 | 4 | CH_bol_175 | 3 | 3 | 0.00000182697 |
| Camellia sinensis var. sinensis | Chr9 | 4 | CH_camsi_456 | 4 | 22 | 0.0000223275 |
| Corylus avellana | 7 | 4 | CH_cav_93 | 4 | 5 | 0.0000000261924 |
| Carica papaya | supercontig_13 | 4 | CH_cpa_255 | 3 | 8 | 0.00051484 |
| Fragaria x ananassa | Fvb7-3 | 4 | CH_fan_378 | 3 | 5 | 0.00010688 |
| Gossypium hirsutum | D07 | 4 | CH_ghi_177 | 4 | 4 | 0.00000000469775 |
| Helianthus annuus | HanXRQChr17 | 4 | CH_han_505 | 4 | 45 | 0.0000989546 |
| Lonicera japonica | GWHAAZE00000009 | 4 | CH_lonja_347 | 3 | 3 | 0.0000175536 |
| Magnolia biondii | Chr15 | 4 | CH_mbi_515 | 3 | 16 | 0.00023729 |
| Rhododendron simsii | chr12 | 4 | CH_rsi_278 | 3 | 3 | 0.00000424763 |
| Sapria himalayana | scaffold32_6892495 | 4 | CH_shi_139 | 3 | 8 | 0.0000452726 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |