Functional clusters
Information
- Type Gene Ontology
- Description extracellular space
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aquilegia oxysepala | CHR06 | 3 | CH_aox_251 | 3 | 4 | 0.000410912 |
| Brassica rapa | A04 | 3 | CH_bra_270 | 3 | 3 | 0.000503465 |
| Durio zibethinus | NW_019167937.1 | 3 | CH_dzi_258 | 3 | 3 | 0.000274935 |
| Durio zibethinus | NW_019167949.1 | 3 | CH_dzi_259 | 3 | 3 | 0.000274935 |
| Helianthus annuus | HanXRQChr05 | 3 | CH_han_274 | 6 | 29 | 0.000000290392 |
| Helianthus annuus | HanXRQChr02 | 3 | CH_han_392 | 5 | 22 | 0.0000110492 |
| Oryza sativa ssp. japonica | chr06 | 3 | CH_osa_255 | 4 | 5 | 0.0000282953 |
| Oryza sativa ssp. japonica | chr02 | 3 | CH_osa_256 | 4 | 5 | 0.0000282953 |
| Punica granatum | NC_045130.1 | 3 | CH_pgr_168 | 4 | 4 | 0.000000805385 |
| Quercus lobata | 12 | 3 | CH_qlo_16 | 13 | 13 | 1.04727e-30 |
| Solanum lycopersicum | SL4.0ch04 | 3 | CH_sly_506 | 4 | 8 | 0.000368835 |
| Solanum tuberosum | ST4.03ch01 | 3 | CH_stu_19 | 12 | 14 | 7.53757e-24 |
| Solanum tuberosum | ST4.03ch04 | 3 | CH_stu_40 | 9 | 10 | 2.40954e-17 |
| Solanum tuberosum | ST4.03ch09 | 3 | CH_stu_609 | 4 | 9 | 0.000704677 |
| Utricularia gibba | unitig_26 | 3 | CH_ugi_137 | 3 | 6 | 0.000736116 |
| Zea mays | 5 | 3 | CH_zma_159 | 4 | 4 | 0.00000812568 |
| Aquilegia oxysepala | CHR06 | 4 | CH_aox_251 | 3 | 4 | 0.000410912 |
| Brassica rapa | A04 | 4 | CH_bra_270 | 3 | 3 | 0.000503465 |
| Durio zibethinus | NW_019167937.1 | 4 | CH_dzi_258 | 3 | 3 | 0.000274935 |
| Durio zibethinus | NW_019167949.1 | 4 | CH_dzi_259 | 3 | 3 | 0.000274935 |
| Helianthus annuus | HanXRQChr05 | 4 | CH_han_274 | 6 | 29 | 0.000000290392 |
| Helianthus annuus | HanXRQChr02 | 4 | CH_han_392 | 5 | 22 | 0.0000110492 |
| Oryza sativa ssp. japonica | chr06 | 4 | CH_osa_255 | 4 | 5 | 0.0000282953 |
| Oryza sativa ssp. japonica | chr02 | 4 | CH_osa_256 | 4 | 5 | 0.0000282953 |
| Punica granatum | NC_045130.1 | 4 | CH_pgr_168 | 4 | 4 | 0.000000805385 |
| Quercus lobata | 12 | 4 | CH_qlo_16 | 13 | 13 | 1.04727e-30 |
| Solanum lycopersicum | SL4.0ch04 | 4 | CH_sly_506 | 4 | 8 | 0.000368835 |
| Solanum tuberosum | ST4.03ch01 | 4 | CH_stu_19 | 12 | 14 | 7.53757e-24 |
| Solanum tuberosum | ST4.03ch04 | 4 | CH_stu_40 | 9 | 10 | 2.40954e-17 |
| Solanum tuberosum | ST4.03ch09 | 4 | CH_stu_609 | 4 | 9 | 0.000704677 |
| Utricularia gibba | unitig_26 | 4 | CH_ugi_137 | 3 | 6 | 0.000736116 |
| Zea mays | 5 | 4 | CH_zma_159 | 4 | 4 | 0.00000812568 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |