Functional clusters
Information
- Type Gene Ontology
- Description calmodulin binding
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr1 | 3 | CH_acertr_518 | 3 | 3 | 0.00084662 |
| Actinidia chinensis | Lachesis_group5 | 3 | CH_ach_89 | 4 | 4 | 0.00000581076 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.16 | 3 | CH_arhy_268 | 5 | 6 | 0.0000000961614 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.06 | 3 | CH_arhy_387 | 4 | 4 | 0.00000542054 |
| Arabidopsis thaliana | Chr1 | 3 | CH_ath_78 | 7 | 11 | 0.000000000265123 |
| Brassica carinata | ChrC06 | 3 | CH_bca_979 | 3 | 3 | 0.000886746 |
| Brassica carinata | ChrB07 | 3 | CH_bca_980 | 3 | 3 | 0.000886746 |
| Beta vulgaris | Chr4_EL10_PGA_scaffold1 | 3 | CH_bvu_122 | 5 | 10 | 0.0000034294 |
| Camellia sinensis var. sinensis | Chr15 | 3 | CH_camsi_32 | 11 | 21 | 8.51262e-19 |
| Capsicum annuum | PGAv.1.6.scaffold411 | 3 | CH_can_325 | 5 | 17 | 0.0000969818 |
| Capsicum annuum | PGAv.1.6.scaffold853 | 3 | CH_can_343 | 4 | 7 | 0.000156852 |
| Coffea canephora | chr4 | 3 | CH_ccan_36 | 6 | 49 | 0.000000000313042 |
| Carya illinoinensis | Chr15 | 3 | CH_cil_284 | 4 | 4 | 0.00000863263 |
| Citrullus lanatus | CG_Chr03 | 3 | CH_cla_15 | 11 | 47 | 0.00000000000179755 |
| Cucumis melo | chr02 | 3 | CH_cme_41 | 9 | 32 | 0.0000000000278629 |
| Cucumis sativus L. | chr1 | 3 | CH_csa_11 | 12 | 24 | 3.03805e-19 |
| Daucus carota | DCARv2_Chr9 | 3 | CH_dca_331 | 4 | 6 | 0.000353219 |
| Erigeron canadensis | Conyza_canadensis_scaffold:7 | 3 | CH_eca_435 | 3 | 3 | 0.000550017 |
| Eucalyptus grandis | Chr05 | 3 | CH_egr_235 | 8 | 13 | 0.00000000000195572 |
| Eucalyptus grandis | Chr01 | 3 | CH_egr_423 | 6 | 11 | 0.0000000504318 |
| Eucalyptus grandis | Chr05 | 3 | CH_egr_531 | 5 | 8 | 0.00000162999 |
| Lactuca sativa | Lsat_1_v8_lg_1 | 3 | CH_lsa_320 | 4 | 6 | 0.0000450967 |
| Oryza sativa ssp. japonica | chr11 | 3 | CH_osa_260 | 6 | 23 | 0.0000308939 |
| Petunia axillaris | Peaxi162Scf00648 | 3 | CH_pax_358 | 3 | 3 | 0.000995295 |
| Petunia axillaris | Peaxi162Scf00017 | 3 | CH_pax_68 | 5 | 6 | 0.0000000603742 |
| Punica granatum | NC_045132.1 | 3 | CH_pgr_192 | 5 | 7 | 0.0000032359 |
| Rosa chinensis | RcHm_v2.0_Chr3 | 3 | CH_rch_658 | 3 | 3 | 0.000280061 |
| Rhododendron simsii | chr08 | 3 | CH_rsi_264 | 4 | 4 | 0.000002354 |
| Salvia bowleyana | GWHASIU00000003 | 3 | CH_sbo_214 | 5 | 10 | 0.000000702449 |
| Sechium edule | LG04 | 3 | CH_sed_50 | 6 | 6 | 0.000000000144346 |
| Solanum lycopersicum | SL4.0ch03 | 3 | CH_sly_122 | 6 | 7 | 0.0000000042836 |
| Solanum pennellii | Spenn-ch03 | 3 | CH_spe_58 | 6 | 7 | 0.0000000000554269 |
| Selenicereus undatus | Scaffold_33680 | 3 | CH_sun_111 | 4 | 7 | 0.0000849374 |
| Trifolium pratense | Tp57577_TGAC_v2_LG6 | 3 | CH_tpr_130 | 4 | 4 | 0.00000303474 |
| Vaccinium macrocarpon | chr5_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_110 | 5 | 6 | 0.000000131051 |
| Vigna mungo | CM024070.1 | 3 | CH_vmu_123 | 4 | 4 | 0.00000317371 |
| Vitis vinifera | chr17 | 3 | CH_vvi_405 | 3 | 3 | 0.000686303 |
| Acer truncatum | chr1 | 4 | CH_acertr_518 | 3 | 3 | 0.00084662 |
| Actinidia chinensis | Lachesis_group5 | 4 | CH_ach_89 | 4 | 4 | 0.00000581076 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.16 | 4 | CH_arhy_268 | 5 | 6 | 0.0000000961614 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.06 | 4 | CH_arhy_387 | 4 | 4 | 0.00000542054 |
| Arabidopsis thaliana | Chr1 | 4 | CH_ath_78 | 7 | 11 | 0.000000000265123 |
| Brassica carinata | ChrC06 | 4 | CH_bca_979 | 3 | 3 | 0.000886746 |
| Brassica carinata | ChrB07 | 4 | CH_bca_980 | 3 | 3 | 0.000886746 |
| Beta vulgaris | Chr4_EL10_PGA_scaffold1 | 4 | CH_bvu_122 | 5 | 10 | 0.0000034294 |
| Camellia sinensis var. sinensis | Chr15 | 4 | CH_camsi_32 | 11 | 21 | 8.51262e-19 |
| Capsicum annuum | PGAv.1.6.scaffold411 | 4 | CH_can_325 | 5 | 17 | 0.0000969818 |
| Capsicum annuum | PGAv.1.6.scaffold853 | 4 | CH_can_343 | 4 | 7 | 0.000156852 |
| Coffea canephora | chr4 | 4 | CH_ccan_36 | 6 | 49 | 0.000000000313042 |
| Carya illinoinensis | Chr15 | 4 | CH_cil_284 | 4 | 4 | 0.00000863263 |
| Citrullus lanatus | CG_Chr03 | 4 | CH_cla_15 | 11 | 47 | 0.00000000000179755 |
| Cucumis melo | chr02 | 4 | CH_cme_41 | 9 | 32 | 0.0000000000278629 |
| Cucumis sativus L. | chr1 | 4 | CH_csa_11 | 12 | 24 | 3.03805e-19 |
| Daucus carota | DCARv2_Chr9 | 4 | CH_dca_331 | 4 | 6 | 0.000353219 |
| Erigeron canadensis | Conyza_canadensis_scaffold:7 | 4 | CH_eca_435 | 3 | 3 | 0.000550017 |
| Eucalyptus grandis | Chr05 | 4 | CH_egr_235 | 8 | 13 | 0.00000000000195572 |
| Eucalyptus grandis | Chr01 | 4 | CH_egr_423 | 6 | 11 | 0.0000000504318 |
| Eucalyptus grandis | Chr05 | 4 | CH_egr_531 | 5 | 8 | 0.00000162999 |
| Lactuca sativa | Lsat_1_v8_lg_1 | 4 | CH_lsa_320 | 4 | 6 | 0.0000450967 |
| Oryza sativa ssp. japonica | chr11 | 4 | CH_osa_260 | 6 | 23 | 0.0000308939 |
| Petunia axillaris | Peaxi162Scf00648 | 4 | CH_pax_358 | 3 | 3 | 0.000995295 |
| Petunia axillaris | Peaxi162Scf00017 | 4 | CH_pax_68 | 5 | 6 | 0.0000000603742 |
| Punica granatum | NC_045132.1 | 4 | CH_pgr_192 | 5 | 7 | 0.0000032359 |
| Rosa chinensis | RcHm_v2.0_Chr3 | 4 | CH_rch_658 | 3 | 3 | 0.000280061 |
| Rhododendron simsii | chr08 | 4 | CH_rsi_264 | 4 | 4 | 0.000002354 |
| Salvia bowleyana | GWHASIU00000003 | 4 | CH_sbo_214 | 5 | 10 | 0.000000702449 |
| Sechium edule | LG04 | 4 | CH_sed_50 | 6 | 6 | 0.000000000144346 |
| Solanum lycopersicum | SL4.0ch03 | 4 | CH_sly_122 | 6 | 7 | 0.0000000042836 |
| Solanum pennellii | Spenn-ch03 | 4 | CH_spe_58 | 6 | 7 | 0.0000000000554269 |
| Selenicereus undatus | Scaffold_33680 | 4 | CH_sun_111 | 4 | 7 | 0.0000849374 |
| Trifolium pratense | Tp57577_TGAC_v2_LG6 | 4 | CH_tpr_130 | 4 | 4 | 0.00000303474 |
| Vaccinium macrocarpon | chr5_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_110 | 5 | 6 | 0.000000131051 |
| Vigna mungo | CM024070.1 | 4 | CH_vmu_123 | 4 | 4 | 0.00000317371 |
| Vitis vinifera | chr17 | 4 | CH_vvi_405 | 3 | 3 | 0.000686303 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |