Functional clusters
Information
- Type Gene Ontology
- Description calcium ion binding
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr13 | 3 | CH_acertr_2 | 17 | 19 | 4.79953e-31 |
| Arabidopsis lyrata | scaffold_6 | 3 | CH_aly_305 | 4 | 5 | 0.000568276 |
| Avicennia marina | ScioBoG_102837_HRSCAF_103074 | 3 | CH_ama_41 | 5 | 5 | 0.0000185107 |
| Aquilegia oxysepala | CHR01 | 3 | CH_aox_172 | 4 | 4 | 0.0000669409 |
| Aquilegia oxysepala | CHR05 | 3 | CH_aox_62 | 6 | 7 | 0.0000000233365 |
| Camellia sinensis var. sinensis | Chr9 | 3 | CH_camsi_311 | 7 | 16 | 0.000000626589 |
| Cannabis sativa | NC_044372.1 | 3 | CH_cansat_20 | 13 | 23 | 1.06666e-18 |
| Capsicum annuum | PGAv.1.6.scaffold742 | 3 | CH_can_333 | 6 | 19 | 0.000134316 |
| Capsicum annuum | PGAv.1.6.scaffold371 | 3 | CH_can_85 | 7 | 7 | 0.0000000000412319 |
| Citrus clementina | scaffold_1 | 3 | CH_ccl_23 | 15 | 23 | 9.653e-22 |
| Citrus clementina | scaffold_5 | 3 | CH_ccl_325 | 4 | 4 | 0.000140705 |
| Carpinus fangiana | Cfa07 | 3 | CH_cfa_12 | 15 | 22 | 5.71163e-23 |
| Carya illinoinensis | Chr05 | 3 | CH_cil_186 | 8 | 16 | 0.0000000592918 |
| Carya illinoinensis | Chr15 | 3 | CH_cil_201 | 7 | 11 | 0.000000151144 |
| Carya illinoinensis | Chr15 | 3 | CH_cil_23 | 17 | 28 | 1.2424e-22 |
| Carya illinoinensis | Chr16 | 3 | CH_cil_308 | 5 | 6 | 0.000025673 |
| Citrullus lanatus | CG_Chr08 | 3 | CH_cla_17 | 9 | 13 | 0.00000000000196573 |
| Cucumis melo | chr03 | 3 | CH_cme_26 | 10 | 14 | 0.00000000000000474639 |
| Chenopodium quinoa | C_Quinoa_Scaffold_4082 | 3 | CH_cqu_325 | 8 | 35 | 0.00003947 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2370 | 3 | CH_cqu_66 | 8 | 9 | 0.000000000018628 |
| Cucumis sativus L. | chr2 | 3 | CH_csa_22 | 11 | 14 | 7.47364e-17 |
| Daucus carota | DCARv2_Chr9 | 3 | CH_dca_150 | 6 | 9 | 0.00000103838 |
| Erigeron canadensis | Conyza_canadensis_scaffold:3 | 3 | CH_eca_176 | 5 | 6 | 0.00000284375 |
| Erigeron canadensis | Conyza_canadensis_scaffold:1 | 3 | CH_eca_209 | 5 | 7 | 0.00000990044 |
| Erigeron canadensis | Conyza_canadensis_scaffold:5 | 3 | CH_eca_343 | 5 | 11 | 0.000213235 |
| Erigeron canadensis | Conyza_canadensis_scaffold:1 | 3 | CH_eca_385 | 4 | 5 | 0.000373277 |
| Eucalyptus grandis | Chr06 | 3 | CH_egr_453 | 6 | 8 | 0.000000177027 |
| Eucalyptus grandis | Chr08 | 3 | CH_egr_732 | 4 | 4 | 0.000113648 |
| Erythranthe guttata | scaffold_14 | 3 | CH_egut_138 | 6 | 6 | 0.000000015066 |
| Erythranthe guttata | scaffold_14 | 3 | CH_egut_421 | 4 | 5 | 0.000928318 |
| Fragaria x ananassa | Fvb3-4 | 3 | CH_fan_436 | 4 | 4 | 0.000243304 |
| Fragaria vesca | Fvb2 | 3 | CH_fve_177 | 5 | 6 | 0.0000022632 |
| Fragaria vesca | Fvb4 | 3 | CH_fve_336 | 6 | 25 | 0.000385167 |
| Gossypium hirsutum | A06 | 3 | CH_ghi_148 | 7 | 7 | 0.000000000350508 |
| Gossypium hirsutum | D02 | 3 | CH_ghi_322 | 5 | 5 | 0.00000438664 |
| Gossypium hirsutum | D06 | 3 | CH_ghi_59 | 10 | 10 | 2.4758e-16 |
| Glycine max | Gm14 | 3 | CH_gma_407 | 5 | 9 | 0.00027732 |
| Gossypium raimondii | Chr05 | 3 | CH_gra_157 | 5 | 5 | 0.00000252367 |
| Gossypium raimondii | Chr09 | 3 | CH_gra_290 | 4 | 4 | 0.000274462 |
| Gossypium raimondii | Chr10 | 3 | CH_gra_44 | 9 | 10 | 0.000000000000173806 |
| Magnolia biondii | Chr02 | 3 | CH_mbi_8 | 16 | 21 | 1.0675e-27 |
| Manihot esculenta | Chromosome04 | 3 | CH_mes_117 | 11 | 33 | 0.000000000201225 |
| Manihot esculenta | Chromosome13 | 3 | CH_mes_347 | 4 | 4 | 0.000241496 |
| Manihot esculenta | Chromosome05 | 3 | CH_mes_62 | 9 | 9 | 0.0000000000000153221 |
| Manihot esculenta | Chromosome18 | 3 | CH_mes_75 | 10 | 15 | 0.000000000000399113 |
| Manihot esculenta | Chromosome02 | 3 | CH_mes_78 | 9 | 11 | 0.000000000000829007 |
| Marchantia polymorpha | scaffold_7 | 3 | CH_mpo_114 | 4 | 6 | 0.00044497 |
| Marchantia polymorpha | scaffold_42 | 3 | CH_mpo_50 | 5 | 6 | 0.00000111628 |
| Medicago truncatula | chr1 | 3 | CH_mtr_131 | 10 | 26 | 0.0000000000127011 |
| Medicago truncatula | chr3 | 3 | CH_mtr_229 | 7 | 12 | 0.0000000100078 |
| Medicago truncatula | chr5 | 3 | CH_mtr_646 | 4 | 5 | 0.000311504 |
| Medicago truncatula | chr2 | 3 | CH_mtr_647 | 4 | 5 | 0.000311504 |
| Nelumbo nucifera | chr1 | 3 | CH_nnu_164 | 5 | 7 | 0.0000237757 |
| Nelumbo nucifera | chr1 | 3 | CH_nnu_65 | 10 | 38 | 0.0000000114184 |
| Nelumbo nucifera | chr1 | 3 | CH_nnu_86 | 6 | 7 | 0.0000000610847 |
| Nicotiana tabacum | Nitab4.5_0000686 | 3 | CH_nta_36 | 6 | 10 | 0.000000379876 |
| Olea europaea | chr14 | 3 | CH_oeu_35 | 8 | 14 | 0.000000000952088 |
| Olea europaea | chr23 | 3 | CH_oeu_96 | 7 | 18 | 0.00000134143 |
| Petunia axillaris | Peaxi162Scf01132 | 3 | CH_pax_316 | 4 | 5 | 0.000589604 |
| Prunus persica | Pp01 | 3 | CH_ppe_56 | 9 | 9 | 0.00000000000000352687 |
| Pisum sativum | chr6LG2 | 3 | CH_psa_75 | 7 | 14 | 0.0000000286047 |
| Papaver somniferum | NC_039363.1 | 3 | CH_pso_65 | 10 | 17 | 0.0000000000000144737 |
| Populus trichocarpa | Chr02 | 3 | CH_ptr_104 | 8 | 9 | 0.0000000000198962 |
| Populus trichocarpa | Chr14 | 3 | CH_ptr_224 | 6 | 8 | 0.000000698084 |
| Populus trichocarpa | Chr19 | 3 | CH_ptr_75 | 9 | 10 | 0.000000000000206388 |
| Quercus lobata | 9 | 3 | CH_qlo_1023 | 4 | 5 | 0.000846741 |
| Quercus lobata | CM012294 | 3 | CH_qlo_25 | 19 | 30 | 2.50399e-28 |
| Rhododendron simsii | chr10 | 3 | CH_rsi_427 | 4 | 4 | 0.000210936 |
| Rhododendron simsii | chr07 | 3 | CH_rsi_71 | 9 | 9 | 0.000000000000012038 |
| Rhododendron simsii | chr02 | 3 | CH_rsi_77 | 14 | 43 | 0.000000000000038821 |
| Salvia bowleyana | GWHASIU00000005 | 3 | CH_sbo_388 | 4 | 5 | 0.000162625 |
| Salix brachista | GWHAAZH00000014 | 3 | CH_sbr_112 | 7 | 10 | 0.000000035998 |
| Salix brachista | GWHAAZH00000019 | 3 | CH_sbr_51 | 13 | 40 | 0.00000000000250035 |
| Sechium edule | LG10 | 3 | CH_sed_20 | 13 | 18 | 1.05515e-18 |
| Sechium edule | LG11 | 3 | CH_sed_28 | 10 | 11 | 0.00000000000000177616 |
| Sequoiadendron giganteum | HRSCAF_1 | 3 | CH_sgi_152 | 13 | 32 | 3.47151e-17 |
| Sequoiadendron giganteum | chr1 | 3 | CH_sgi_342 | 9 | 20 | 0.0000000000238463 |
| Solanum lycopersicum | SL4.0ch06 | 3 | CH_sly_552 | 4 | 5 | 0.000614745 |
| Solanum pennellii | Spenn-ch04 | 3 | CH_spe_150 | 5 | 5 | 0.000000248615 |
| Solanum tuberosum | ST4.03ch04 | 3 | CH_stu_228 | 5 | 5 | 0.000000412594 |
| Trochodendron aralioides | group5 | 3 | CH_tar_180 | 5 | 5 | 0.00000169458 |
| Trochodendron aralioides | group1 | 3 | CH_tar_247 | 5 | 7 | 0.0000350732 |
| Theobroma cacao | Chromosome_8 | 3 | CH_tca_12 | 15 | 26 | 2.12821e-21 |
| Theobroma cacao | Chromosome_8 | 3 | CH_tca_242 | 5 | 8 | 0.0000375613 |
| Trifolium pratense | Tp57577_TGAC_v2_LG3 | 3 | CH_tpr_234 | 4 | 4 | 0.0000893871 |
| Vanilla planifolia | CM028158.1 | 3 | CH_vpl_125 | 9 | 45 | 0.00000298092 |
| Vitis vinifera | chr1 | 3 | CH_vvi_72 | 8 | 9 | 0.00000000000302649 |
| Zea mays | 1 | 3 | CH_zma_14 | 16 | 42 | 3.60295e-17 |
| Acer truncatum | chr13 | 4 | CH_acertr_2 | 17 | 19 | 4.79953e-31 |
| Arabidopsis lyrata | scaffold_6 | 4 | CH_aly_305 | 4 | 5 | 0.000568276 |
| Avicennia marina | ScioBoG_102837_HRSCAF_103074 | 4 | CH_ama_41 | 5 | 5 | 0.0000185107 |
| Aquilegia oxysepala | CHR01 | 4 | CH_aox_172 | 4 | 4 | 0.0000669409 |
| Aquilegia oxysepala | CHR05 | 4 | CH_aox_62 | 6 | 7 | 0.0000000233365 |
| Camellia sinensis var. sinensis | Chr9 | 4 | CH_camsi_311 | 7 | 16 | 0.000000626589 |
| Cannabis sativa | NC_044372.1 | 4 | CH_cansat_20 | 13 | 23 | 1.06666e-18 |
| Capsicum annuum | PGAv.1.6.scaffold742 | 4 | CH_can_333 | 6 | 19 | 0.000134316 |
| Capsicum annuum | PGAv.1.6.scaffold371 | 4 | CH_can_85 | 7 | 7 | 0.0000000000412319 |
| Citrus clementina | scaffold_1 | 4 | CH_ccl_23 | 15 | 23 | 9.653e-22 |
| Citrus clementina | scaffold_5 | 4 | CH_ccl_325 | 4 | 4 | 0.000140705 |
| Carpinus fangiana | Cfa07 | 4 | CH_cfa_12 | 15 | 22 | 5.71163e-23 |
| Carya illinoinensis | Chr05 | 4 | CH_cil_186 | 8 | 16 | 0.0000000592918 |
| Carya illinoinensis | Chr15 | 4 | CH_cil_201 | 7 | 11 | 0.000000151144 |
| Carya illinoinensis | Chr15 | 4 | CH_cil_23 | 17 | 28 | 1.2424e-22 |
| Carya illinoinensis | Chr16 | 4 | CH_cil_308 | 5 | 6 | 0.000025673 |
| Citrullus lanatus | CG_Chr08 | 4 | CH_cla_17 | 9 | 13 | 0.00000000000196573 |
| Cucumis melo | chr03 | 4 | CH_cme_26 | 10 | 14 | 0.00000000000000474639 |
| Chenopodium quinoa | C_Quinoa_Scaffold_4082 | 4 | CH_cqu_325 | 8 | 35 | 0.00003947 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2370 | 4 | CH_cqu_66 | 8 | 9 | 0.000000000018628 |
| Cucumis sativus L. | chr2 | 4 | CH_csa_22 | 11 | 14 | 7.47364e-17 |
| Daucus carota | DCARv2_Chr9 | 4 | CH_dca_150 | 6 | 9 | 0.00000103838 |
| Erigeron canadensis | Conyza_canadensis_scaffold:3 | 4 | CH_eca_176 | 5 | 6 | 0.00000284375 |
| Erigeron canadensis | Conyza_canadensis_scaffold:1 | 4 | CH_eca_209 | 5 | 7 | 0.00000990044 |
| Erigeron canadensis | Conyza_canadensis_scaffold:5 | 4 | CH_eca_343 | 5 | 11 | 0.000213235 |
| Erigeron canadensis | Conyza_canadensis_scaffold:1 | 4 | CH_eca_385 | 4 | 5 | 0.000373277 |
| Eucalyptus grandis | Chr06 | 4 | CH_egr_453 | 6 | 8 | 0.000000177027 |
| Eucalyptus grandis | Chr08 | 4 | CH_egr_732 | 4 | 4 | 0.000113648 |
| Erythranthe guttata | scaffold_14 | 4 | CH_egut_138 | 6 | 6 | 0.000000015066 |
| Erythranthe guttata | scaffold_14 | 4 | CH_egut_421 | 4 | 5 | 0.000928318 |
| Fragaria x ananassa | Fvb3-4 | 4 | CH_fan_436 | 4 | 4 | 0.000243304 |
| Fragaria vesca | Fvb2 | 4 | CH_fve_177 | 5 | 6 | 0.0000022632 |
| Fragaria vesca | Fvb4 | 4 | CH_fve_336 | 6 | 25 | 0.000385167 |
| Gossypium hirsutum | A06 | 4 | CH_ghi_148 | 7 | 7 | 0.000000000350508 |
| Gossypium hirsutum | D02 | 4 | CH_ghi_322 | 5 | 5 | 0.00000438664 |
| Gossypium hirsutum | D06 | 4 | CH_ghi_59 | 10 | 10 | 2.4758e-16 |
| Glycine max | Gm14 | 4 | CH_gma_407 | 5 | 9 | 0.00027732 |
| Gossypium raimondii | Chr05 | 4 | CH_gra_157 | 5 | 5 | 0.00000252367 |
| Gossypium raimondii | Chr09 | 4 | CH_gra_290 | 4 | 4 | 0.000274462 |
| Gossypium raimondii | Chr10 | 4 | CH_gra_44 | 9 | 10 | 0.000000000000173806 |
| Magnolia biondii | Chr02 | 4 | CH_mbi_8 | 16 | 21 | 1.0675e-27 |
| Manihot esculenta | Chromosome04 | 4 | CH_mes_117 | 11 | 33 | 0.000000000201225 |
| Manihot esculenta | Chromosome13 | 4 | CH_mes_347 | 4 | 4 | 0.000241496 |
| Manihot esculenta | Chromosome05 | 4 | CH_mes_62 | 9 | 9 | 0.0000000000000153221 |
| Manihot esculenta | Chromosome18 | 4 | CH_mes_75 | 10 | 15 | 0.000000000000399113 |
| Manihot esculenta | Chromosome02 | 4 | CH_mes_78 | 9 | 11 | 0.000000000000829007 |
| Marchantia polymorpha | scaffold_7 | 4 | CH_mpo_114 | 4 | 6 | 0.00044497 |
| Marchantia polymorpha | scaffold_42 | 4 | CH_mpo_50 | 5 | 6 | 0.00000111628 |
| Medicago truncatula | chr1 | 4 | CH_mtr_131 | 10 | 26 | 0.0000000000127011 |
| Medicago truncatula | chr3 | 4 | CH_mtr_229 | 7 | 12 | 0.0000000100078 |
| Medicago truncatula | chr5 | 4 | CH_mtr_646 | 4 | 5 | 0.000311504 |
| Medicago truncatula | chr2 | 4 | CH_mtr_647 | 4 | 5 | 0.000311504 |
| Nelumbo nucifera | chr1 | 4 | CH_nnu_164 | 5 | 7 | 0.0000237757 |
| Nelumbo nucifera | chr1 | 4 | CH_nnu_65 | 10 | 38 | 0.0000000114184 |
| Nelumbo nucifera | chr1 | 4 | CH_nnu_86 | 6 | 7 | 0.0000000610847 |
| Nicotiana tabacum | Nitab4.5_0000686 | 4 | CH_nta_36 | 6 | 10 | 0.000000379876 |
| Olea europaea | chr14 | 4 | CH_oeu_35 | 8 | 14 | 0.000000000952088 |
| Olea europaea | chr23 | 4 | CH_oeu_96 | 7 | 18 | 0.00000134143 |
| Petunia axillaris | Peaxi162Scf01132 | 4 | CH_pax_316 | 4 | 5 | 0.000589604 |
| Prunus persica | Pp01 | 4 | CH_ppe_56 | 9 | 9 | 0.00000000000000352687 |
| Pisum sativum | chr6LG2 | 4 | CH_psa_75 | 7 | 14 | 0.0000000286047 |
| Papaver somniferum | NC_039363.1 | 4 | CH_pso_65 | 10 | 17 | 0.0000000000000144737 |
| Populus trichocarpa | Chr02 | 4 | CH_ptr_104 | 8 | 9 | 0.0000000000198962 |
| Populus trichocarpa | Chr14 | 4 | CH_ptr_224 | 6 | 8 | 0.000000698084 |
| Populus trichocarpa | Chr19 | 4 | CH_ptr_75 | 9 | 10 | 0.000000000000206388 |
| Quercus lobata | 9 | 4 | CH_qlo_1023 | 4 | 5 | 0.000846741 |
| Quercus lobata | CM012294 | 4 | CH_qlo_25 | 19 | 30 | 2.50399e-28 |
| Rhododendron simsii | chr10 | 4 | CH_rsi_427 | 4 | 4 | 0.000210936 |
| Rhododendron simsii | chr07 | 4 | CH_rsi_71 | 9 | 9 | 0.000000000000012038 |
| Rhododendron simsii | chr02 | 4 | CH_rsi_77 | 14 | 43 | 0.000000000000038821 |
| Salvia bowleyana | GWHASIU00000005 | 4 | CH_sbo_388 | 4 | 5 | 0.000162625 |
| Salix brachista | GWHAAZH00000014 | 4 | CH_sbr_112 | 7 | 10 | 0.000000035998 |
| Salix brachista | GWHAAZH00000019 | 4 | CH_sbr_51 | 13 | 40 | 0.00000000000250035 |
| Sechium edule | LG10 | 4 | CH_sed_20 | 13 | 18 | 1.05515e-18 |
| Sechium edule | LG11 | 4 | CH_sed_28 | 10 | 11 | 0.00000000000000177616 |
| Sequoiadendron giganteum | HRSCAF_1 | 4 | CH_sgi_152 | 13 | 32 | 3.47151e-17 |
| Sequoiadendron giganteum | chr1 | 4 | CH_sgi_342 | 9 | 20 | 0.0000000000238463 |
| Solanum lycopersicum | SL4.0ch06 | 4 | CH_sly_552 | 4 | 5 | 0.000614745 |
| Solanum pennellii | Spenn-ch04 | 4 | CH_spe_150 | 5 | 5 | 0.000000248615 |
| Solanum tuberosum | ST4.03ch04 | 4 | CH_stu_228 | 5 | 5 | 0.000000412594 |
| Trochodendron aralioides | group5 | 4 | CH_tar_180 | 5 | 5 | 0.00000169458 |
| Trochodendron aralioides | group1 | 4 | CH_tar_247 | 5 | 7 | 0.0000350732 |
| Theobroma cacao | Chromosome_8 | 4 | CH_tca_12 | 15 | 26 | 2.12821e-21 |
| Theobroma cacao | Chromosome_8 | 4 | CH_tca_242 | 5 | 8 | 0.0000375613 |
| Trifolium pratense | Tp57577_TGAC_v2_LG3 | 4 | CH_tpr_234 | 4 | 4 | 0.0000893871 |
| Vanilla planifolia | CM028158.1 | 4 | CH_vpl_125 | 9 | 45 | 0.00000298092 |
| Vitis vinifera | chr1 | 4 | CH_vvi_72 | 8 | 9 | 0.00000000000302649 |
| Zea mays | 1 | 4 | CH_zma_14 | 16 | 42 | 3.60295e-17 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |