Functional clusters

Information

  • Type Gene Ontology
  • Description iron ion binding

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-6 3 CH_aar_35 8 8 0.00000000000579039
Acer truncatum chr5 3 CH_acertr_202 11 65 0.00000333145
Avicennia marina ScioBoG_19538_HRSCAF_19626 3 CH_ama_8 8 9 0.0000000000646826
Arabidopsis thaliana Chr3 3 CH_ath_396 5 10 0.0000700614
Amborella trichopoda AmTr_v1.0_scaffold00086 3 CH_atr_304 4 4 0.00051788
Amborella trichopoda AmTr_v1.0_scaffold00067 3 CH_atr_306 6 16 0.000526626
Camellia sinensis var. sinensis Chr7 3 CH_camsi_66 10 12 0.0000000000000876699
Citrus clementina scaffold_3 3 CH_ccl_235 7 12 0.0000053661
Ceratophyllum demersum 5 3 CH_cde_85 6 14 0.0000265214
Corchorus olitorius AWUE01016288.1 3 CH_col_22 7 9 0.0000000013533
Corchorus olitorius AWUE01015387.1 3 CH_col_24 6 6 0.00000000435344
Chenopodium quinoa C_Quinoa_Scaffold_2939 3 CH_cqu_158 7 9 0.000000182102
Chenopodium quinoa C_Quinoa_Scaffold_1971 3 CH_cqu_396 5 6 0.000151398
Chlamydomonas reinhardtii chromosome_10 3 CH_cre_29 7 25 0.00000138907
Eucalyptus grandis Chr04 3 CH_egr_331 15 54 0.000000000744256
Fragaria x ananassa Fvb5-1 3 CH_fan_133 7 9 0.0000000826343
Fragaria x ananassa Fvb7-4 3 CH_fan_212 7 12 0.00000176533
Fragaria x ananassa Fvb5-3 3 CH_fan_370 6 11 0.0000925315
Fragaria x ananassa Fvb7-3 3 CH_fan_453 6 13 0.000337157
Fragaria x ananassa Fvb7-1 3 CH_fan_510 6 14 0.000584393
Fragaria vesca Fvb7 3 CH_fve_107 10 26 0.00000000854714
Fragaria vesca Fvb3 3 CH_fve_109 8 13 0.0000000168397
Fragaria vesca Fvb2 3 CH_fve_127 9 22 0.0000000703926
Fragaria vesca Fvb7 3 CH_fve_128 9 22 0.0000000703926
Fragaria vesca Fvb5 3 CH_fve_135 7 10 0.000000135803
Fragaria vesca Fvb4 3 CH_fve_136 7 10 0.000000135803
Fragaria vesca Fvb6 3 CH_fve_181 6 8 0.00000270472
Fragaria vesca Fvb1 3 CH_fve_217 6 10 0.0000198747
Fragaria vesca Fvb5 3 CH_fve_239 8 29 0.0000474406
Fragaria vesca Fvb7 3 CH_fve_266 7 20 0.0000790556
Fragaria vesca Fvb5 3 CH_fve_268 6 12 0.0000856785
Fragaria vesca Fvb5 3 CH_fve_30 11 13 0.00000000000000171038
Fragaria vesca Fvb5 3 CH_fve_374 4 4 0.000697838
Fragaria vesca Fvb4 3 CH_fve_6 16 17 8.04665e-26
Fragaria vesca Fvb2 3 CH_fve_82 7 7 0.00000000116762
Gossypium hirsutum D06 3 CH_ghi_17 21 28 1.10062e-29
Gossypium hirsutum A01 3 CH_ghi_68 12 16 0.00000000000000226987
Helianthus annuus HanXRQChr08 3 CH_han_314 11 43 0.000000986141
Prunus persica Pp02 3 CH_ppe_258 7 14 0.00000680271
Papaver somniferum NC_039364.1 3 CH_pso_392 9 42 0.0000148971
Rosa chinensis RcHm_v2.0_Chr1 3 CH_rch_101 16 54 0.0000000000000998239
Rosa chinensis RcHm_v2.0_Chr7 3 CH_rch_117 12 24 0.000000000000913397
Rosa chinensis RcHm_v2.0_Chr5 3 CH_rch_126 11 19 0.000000000002272
Rosa chinensis RcHm_v2.0_Chr4 3 CH_rch_13 26 55 7.88235e-31
Rosa chinensis RcHm_v2.0_Chr5 3 CH_rch_155 11 23 0.0000000000389195
Rosa chinensis RcHm_v2.0_Chr7 3 CH_rch_161 10 17 0.0000000000502687
Rosa chinensis RcHm_v2.0_Chr1 3 CH_rch_163 12 32 0.0000000000699028
Rosa chinensis RcHm_v2.0_Chr6 3 CH_rch_181 11 29 0.000000000933208
Rosa chinensis RcHm_v2.0_Chr7 3 CH_rch_203 8 11 0.00000000320414
Rosa chinensis RcHm_v2.0_Chr1 3 CH_rch_279 6 6 0.000000143194
Rosa chinensis RcHm_v2.0_Chr4 3 CH_rch_288 7 10 0.000000197211
Rosa chinensis RcHm_v2.0_Chr5 3 CH_rch_325 7 11 0.000000536711
Rosa chinensis RcHm_v2.0_Chr4 3 CH_rch_344 6 7 0.000000992168
Rosa chinensis RcHm_v2.0_Chr6 3 CH_rch_353 8 19 0.00000134885
Rosa chinensis RcHm_v2.0_Chr1 3 CH_rch_354 8 19 0.00000134885
Rosa chinensis RcHm_v2.0_Chr4 3 CH_rch_406 7 14 0.00000541017
Rosa chinensis RcHm_v2.0_Chr2 3 CH_rch_416 9 33 0.00000706233
Rosa chinensis RcHm_v2.0_Chr1 3 CH_rch_533 6 11 0.000062861
Rosa chinensis RcHm_v2.0_Chr7 3 CH_rch_61 14 22 1.54683e-17
Salvia bowleyana GWHASIU00000005 3 CH_sbo_11 25 51 1.61506e-31
Simmondsia chinensis GWHAASQ00000020 3 CH_sci_232 5 9 0.000405912
Sequoiadendron giganteum chr10 3 CH_sgi_172 12 12 3.6357e-16
Sapria himalayana scaffold68_2605431 3 CH_shi_115 4 6 0.00000814964
Solanum lycopersicum SL4.0ch10 3 CH_sly_224 7 12 0.0000014108
Solanum pennellii Spenn-ch10 3 CH_spe_232 6 11 0.0000137355
Selenicereus undatus Scaffold_33677 3 CH_sun_119 4 4 0.000113377
Tripterygium wilfordii NC_052234.1 3 CH_twi_114 8 16 0.000000244657
Utricularia gibba unitig_62 3 CH_ugi_34 7 16 0.00000098103
Vanilla planifolia CM028155.1 3 CH_vpl_8 13 17 1.52001e-18
Vitis vinifera chr15 3 CH_vvi_217 6 8 0.00000979173
Zea mays 1 3 CH_zma_96 6 6 0.000000111146
Aethionema arabicum LG-6 4 CH_aar_35 8 8 0.00000000000579039
Acer truncatum chr5 4 CH_acertr_202 11 65 0.00000333145
Avicennia marina ScioBoG_19538_HRSCAF_19626 4 CH_ama_8 8 9 0.0000000000646826
Arabidopsis thaliana Chr3 4 CH_ath_396 5 10 0.0000700614
Amborella trichopoda AmTr_v1.0_scaffold00086 4 CH_atr_304 4 4 0.00051788
Amborella trichopoda AmTr_v1.0_scaffold00067 4 CH_atr_306 6 16 0.000526626
Camellia sinensis var. sinensis Chr7 4 CH_camsi_66 10 12 0.0000000000000876699
Citrus clementina scaffold_3 4 CH_ccl_235 7 12 0.0000053661
Ceratophyllum demersum 5 4 CH_cde_85 6 14 0.0000265214
Corchorus olitorius AWUE01016288.1 4 CH_col_22 7 9 0.0000000013533
Corchorus olitorius AWUE01015387.1 4 CH_col_24 6 6 0.00000000435344
Chenopodium quinoa C_Quinoa_Scaffold_2939 4 CH_cqu_158 7 9 0.000000182102
Chenopodium quinoa C_Quinoa_Scaffold_1971 4 CH_cqu_396 5 6 0.000151398
Chlamydomonas reinhardtii chromosome_10 4 CH_cre_29 7 25 0.00000138907
Eucalyptus grandis Chr04 4 CH_egr_331 15 54 0.000000000744256
Fragaria x ananassa Fvb5-1 4 CH_fan_133 7 9 0.0000000826343
Fragaria x ananassa Fvb7-4 4 CH_fan_212 7 12 0.00000176533
Fragaria x ananassa Fvb5-3 4 CH_fan_370 6 11 0.0000925315
Fragaria x ananassa Fvb7-3 4 CH_fan_453 6 13 0.000337157
Fragaria x ananassa Fvb7-1 4 CH_fan_510 6 14 0.000584393
Fragaria vesca Fvb7 4 CH_fve_107 10 26 0.00000000854714
Fragaria vesca Fvb3 4 CH_fve_109 8 13 0.0000000168397
Fragaria vesca Fvb2 4 CH_fve_127 9 22 0.0000000703926
Fragaria vesca Fvb7 4 CH_fve_128 9 22 0.0000000703926
Fragaria vesca Fvb5 4 CH_fve_135 7 10 0.000000135803
Fragaria vesca Fvb4 4 CH_fve_136 7 10 0.000000135803
Fragaria vesca Fvb6 4 CH_fve_181 6 8 0.00000270472
Fragaria vesca Fvb1 4 CH_fve_217 6 10 0.0000198747
Fragaria vesca Fvb5 4 CH_fve_239 8 29 0.0000474406
Fragaria vesca Fvb7 4 CH_fve_266 7 20 0.0000790556
Fragaria vesca Fvb5 4 CH_fve_268 6 12 0.0000856785
Fragaria vesca Fvb5 4 CH_fve_30 11 13 0.00000000000000171038
Fragaria vesca Fvb5 4 CH_fve_374 4 4 0.000697838
Fragaria vesca Fvb4 4 CH_fve_6 16 17 8.04665e-26
Fragaria vesca Fvb2 4 CH_fve_82 7 7 0.00000000116762
Gossypium hirsutum D06 4 CH_ghi_17 21 28 1.10062e-29
Gossypium hirsutum A01 4 CH_ghi_68 12 16 0.00000000000000226987
Helianthus annuus HanXRQChr08 4 CH_han_314 11 43 0.000000986141
Prunus persica Pp02 4 CH_ppe_258 7 14 0.00000680271
Papaver somniferum NC_039364.1 4 CH_pso_392 9 42 0.0000148971
Rosa chinensis RcHm_v2.0_Chr1 4 CH_rch_101 16 54 0.0000000000000998239
Rosa chinensis RcHm_v2.0_Chr7 4 CH_rch_117 12 24 0.000000000000913397
Rosa chinensis RcHm_v2.0_Chr5 4 CH_rch_126 11 19 0.000000000002272
Rosa chinensis RcHm_v2.0_Chr4 4 CH_rch_13 26 55 7.88235e-31
Rosa chinensis RcHm_v2.0_Chr5 4 CH_rch_155 11 23 0.0000000000389195
Rosa chinensis RcHm_v2.0_Chr7 4 CH_rch_161 10 17 0.0000000000502687
Rosa chinensis RcHm_v2.0_Chr1 4 CH_rch_163 12 32 0.0000000000699028
Rosa chinensis RcHm_v2.0_Chr6 4 CH_rch_181 11 29 0.000000000933208
Rosa chinensis RcHm_v2.0_Chr7 4 CH_rch_203 8 11 0.00000000320414
Rosa chinensis RcHm_v2.0_Chr1 4 CH_rch_279 6 6 0.000000143194
Rosa chinensis RcHm_v2.0_Chr4 4 CH_rch_288 7 10 0.000000197211
Rosa chinensis RcHm_v2.0_Chr5 4 CH_rch_325 7 11 0.000000536711
Rosa chinensis RcHm_v2.0_Chr4 4 CH_rch_344 6 7 0.000000992168
Rosa chinensis RcHm_v2.0_Chr6 4 CH_rch_353 8 19 0.00000134885
Rosa chinensis RcHm_v2.0_Chr1 4 CH_rch_354 8 19 0.00000134885
Rosa chinensis RcHm_v2.0_Chr4 4 CH_rch_406 7 14 0.00000541017
Rosa chinensis RcHm_v2.0_Chr2 4 CH_rch_416 9 33 0.00000706233
Rosa chinensis RcHm_v2.0_Chr1 4 CH_rch_533 6 11 0.000062861
Rosa chinensis RcHm_v2.0_Chr7 4 CH_rch_61 14 22 1.54683e-17
Salvia bowleyana GWHASIU00000005 4 CH_sbo_11 25 51 1.61506e-31
Simmondsia chinensis GWHAASQ00000020 4 CH_sci_232 5 9 0.000405912
Sequoiadendron giganteum chr10 4 CH_sgi_172 12 12 3.6357e-16
Sapria himalayana scaffold68_2605431 4 CH_shi_115 4 6 0.00000814964
Solanum lycopersicum SL4.0ch10 4 CH_sly_224 7 12 0.0000014108
Solanum pennellii Spenn-ch10 4 CH_spe_232 6 11 0.0000137355
Selenicereus undatus Scaffold_33677 4 CH_sun_119 4 4 0.000113377
Tripterygium wilfordii NC_052234.1 4 CH_twi_114 8 16 0.000000244657
Utricularia gibba unitig_62 4 CH_ugi_34 7 16 0.00000098103
Vanilla planifolia CM028155.1 4 CH_vpl_8 13 17 1.52001e-18
Vitis vinifera chr15 4 CH_vvi_217 6 8 0.00000979173
Zea mays 1 4 CH_zma_96 6 6 0.000000111146

Available child term results

Ontology identifier Description Number of clusters
GO:0008198 ferrous iron binding 34
GO:0008199 ferric iron binding 12

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001