Functional clusters
Information
- Type Gene Ontology
- Description iron ion binding
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-6 | 3 | CH_aar_35 | 8 | 8 | 0.00000000000579039 |
| Acer truncatum | chr5 | 3 | CH_acertr_202 | 11 | 65 | 0.00000333145 |
| Avicennia marina | ScioBoG_19538_HRSCAF_19626 | 3 | CH_ama_8 | 8 | 9 | 0.0000000000646826 |
| Arabidopsis thaliana | Chr3 | 3 | CH_ath_396 | 5 | 10 | 0.0000700614 |
| Amborella trichopoda | AmTr_v1.0_scaffold00086 | 3 | CH_atr_304 | 4 | 4 | 0.00051788 |
| Amborella trichopoda | AmTr_v1.0_scaffold00067 | 3 | CH_atr_306 | 6 | 16 | 0.000526626 |
| Camellia sinensis var. sinensis | Chr7 | 3 | CH_camsi_66 | 10 | 12 | 0.0000000000000876699 |
| Citrus clementina | scaffold_3 | 3 | CH_ccl_235 | 7 | 12 | 0.0000053661 |
| Ceratophyllum demersum | 5 | 3 | CH_cde_85 | 6 | 14 | 0.0000265214 |
| Corchorus olitorius | AWUE01016288.1 | 3 | CH_col_22 | 7 | 9 | 0.0000000013533 |
| Corchorus olitorius | AWUE01015387.1 | 3 | CH_col_24 | 6 | 6 | 0.00000000435344 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2939 | 3 | CH_cqu_158 | 7 | 9 | 0.000000182102 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1971 | 3 | CH_cqu_396 | 5 | 6 | 0.000151398 |
| Chlamydomonas reinhardtii | chromosome_10 | 3 | CH_cre_29 | 7 | 25 | 0.00000138907 |
| Eucalyptus grandis | Chr04 | 3 | CH_egr_331 | 15 | 54 | 0.000000000744256 |
| Fragaria x ananassa | Fvb5-1 | 3 | CH_fan_133 | 7 | 9 | 0.0000000826343 |
| Fragaria x ananassa | Fvb7-4 | 3 | CH_fan_212 | 7 | 12 | 0.00000176533 |
| Fragaria x ananassa | Fvb5-3 | 3 | CH_fan_370 | 6 | 11 | 0.0000925315 |
| Fragaria x ananassa | Fvb7-3 | 3 | CH_fan_453 | 6 | 13 | 0.000337157 |
| Fragaria x ananassa | Fvb7-1 | 3 | CH_fan_510 | 6 | 14 | 0.000584393 |
| Fragaria vesca | Fvb7 | 3 | CH_fve_107 | 10 | 26 | 0.00000000854714 |
| Fragaria vesca | Fvb3 | 3 | CH_fve_109 | 8 | 13 | 0.0000000168397 |
| Fragaria vesca | Fvb2 | 3 | CH_fve_127 | 9 | 22 | 0.0000000703926 |
| Fragaria vesca | Fvb7 | 3 | CH_fve_128 | 9 | 22 | 0.0000000703926 |
| Fragaria vesca | Fvb5 | 3 | CH_fve_135 | 7 | 10 | 0.000000135803 |
| Fragaria vesca | Fvb4 | 3 | CH_fve_136 | 7 | 10 | 0.000000135803 |
| Fragaria vesca | Fvb6 | 3 | CH_fve_181 | 6 | 8 | 0.00000270472 |
| Fragaria vesca | Fvb1 | 3 | CH_fve_217 | 6 | 10 | 0.0000198747 |
| Fragaria vesca | Fvb5 | 3 | CH_fve_239 | 8 | 29 | 0.0000474406 |
| Fragaria vesca | Fvb7 | 3 | CH_fve_266 | 7 | 20 | 0.0000790556 |
| Fragaria vesca | Fvb5 | 3 | CH_fve_268 | 6 | 12 | 0.0000856785 |
| Fragaria vesca | Fvb5 | 3 | CH_fve_30 | 11 | 13 | 0.00000000000000171038 |
| Fragaria vesca | Fvb5 | 3 | CH_fve_374 | 4 | 4 | 0.000697838 |
| Fragaria vesca | Fvb4 | 3 | CH_fve_6 | 16 | 17 | 8.04665e-26 |
| Fragaria vesca | Fvb2 | 3 | CH_fve_82 | 7 | 7 | 0.00000000116762 |
| Gossypium hirsutum | D06 | 3 | CH_ghi_17 | 21 | 28 | 1.10062e-29 |
| Gossypium hirsutum | A01 | 3 | CH_ghi_68 | 12 | 16 | 0.00000000000000226987 |
| Helianthus annuus | HanXRQChr08 | 3 | CH_han_314 | 11 | 43 | 0.000000986141 |
| Prunus persica | Pp02 | 3 | CH_ppe_258 | 7 | 14 | 0.00000680271 |
| Papaver somniferum | NC_039364.1 | 3 | CH_pso_392 | 9 | 42 | 0.0000148971 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 3 | CH_rch_101 | 16 | 54 | 0.0000000000000998239 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 3 | CH_rch_117 | 12 | 24 | 0.000000000000913397 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 3 | CH_rch_126 | 11 | 19 | 0.000000000002272 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 3 | CH_rch_13 | 26 | 55 | 7.88235e-31 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 3 | CH_rch_155 | 11 | 23 | 0.0000000000389195 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 3 | CH_rch_161 | 10 | 17 | 0.0000000000502687 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 3 | CH_rch_163 | 12 | 32 | 0.0000000000699028 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 3 | CH_rch_181 | 11 | 29 | 0.000000000933208 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 3 | CH_rch_203 | 8 | 11 | 0.00000000320414 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 3 | CH_rch_279 | 6 | 6 | 0.000000143194 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 3 | CH_rch_288 | 7 | 10 | 0.000000197211 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 3 | CH_rch_325 | 7 | 11 | 0.000000536711 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 3 | CH_rch_344 | 6 | 7 | 0.000000992168 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 3 | CH_rch_353 | 8 | 19 | 0.00000134885 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 3 | CH_rch_354 | 8 | 19 | 0.00000134885 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 3 | CH_rch_406 | 7 | 14 | 0.00000541017 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 3 | CH_rch_416 | 9 | 33 | 0.00000706233 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 3 | CH_rch_533 | 6 | 11 | 0.000062861 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 3 | CH_rch_61 | 14 | 22 | 1.54683e-17 |
| Salvia bowleyana | GWHASIU00000005 | 3 | CH_sbo_11 | 25 | 51 | 1.61506e-31 |
| Simmondsia chinensis | GWHAASQ00000020 | 3 | CH_sci_232 | 5 | 9 | 0.000405912 |
| Sequoiadendron giganteum | chr10 | 3 | CH_sgi_172 | 12 | 12 | 3.6357e-16 |
| Sapria himalayana | scaffold68_2605431 | 3 | CH_shi_115 | 4 | 6 | 0.00000814964 |
| Solanum lycopersicum | SL4.0ch10 | 3 | CH_sly_224 | 7 | 12 | 0.0000014108 |
| Solanum pennellii | Spenn-ch10 | 3 | CH_spe_232 | 6 | 11 | 0.0000137355 |
| Selenicereus undatus | Scaffold_33677 | 3 | CH_sun_119 | 4 | 4 | 0.000113377 |
| Tripterygium wilfordii | NC_052234.1 | 3 | CH_twi_114 | 8 | 16 | 0.000000244657 |
| Utricularia gibba | unitig_62 | 3 | CH_ugi_34 | 7 | 16 | 0.00000098103 |
| Vanilla planifolia | CM028155.1 | 3 | CH_vpl_8 | 13 | 17 | 1.52001e-18 |
| Vitis vinifera | chr15 | 3 | CH_vvi_217 | 6 | 8 | 0.00000979173 |
| Zea mays | 1 | 3 | CH_zma_96 | 6 | 6 | 0.000000111146 |
| Aethionema arabicum | LG-6 | 4 | CH_aar_35 | 8 | 8 | 0.00000000000579039 |
| Acer truncatum | chr5 | 4 | CH_acertr_202 | 11 | 65 | 0.00000333145 |
| Avicennia marina | ScioBoG_19538_HRSCAF_19626 | 4 | CH_ama_8 | 8 | 9 | 0.0000000000646826 |
| Arabidopsis thaliana | Chr3 | 4 | CH_ath_396 | 5 | 10 | 0.0000700614 |
| Amborella trichopoda | AmTr_v1.0_scaffold00086 | 4 | CH_atr_304 | 4 | 4 | 0.00051788 |
| Amborella trichopoda | AmTr_v1.0_scaffold00067 | 4 | CH_atr_306 | 6 | 16 | 0.000526626 |
| Camellia sinensis var. sinensis | Chr7 | 4 | CH_camsi_66 | 10 | 12 | 0.0000000000000876699 |
| Citrus clementina | scaffold_3 | 4 | CH_ccl_235 | 7 | 12 | 0.0000053661 |
| Ceratophyllum demersum | 5 | 4 | CH_cde_85 | 6 | 14 | 0.0000265214 |
| Corchorus olitorius | AWUE01016288.1 | 4 | CH_col_22 | 7 | 9 | 0.0000000013533 |
| Corchorus olitorius | AWUE01015387.1 | 4 | CH_col_24 | 6 | 6 | 0.00000000435344 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2939 | 4 | CH_cqu_158 | 7 | 9 | 0.000000182102 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1971 | 4 | CH_cqu_396 | 5 | 6 | 0.000151398 |
| Chlamydomonas reinhardtii | chromosome_10 | 4 | CH_cre_29 | 7 | 25 | 0.00000138907 |
| Eucalyptus grandis | Chr04 | 4 | CH_egr_331 | 15 | 54 | 0.000000000744256 |
| Fragaria x ananassa | Fvb5-1 | 4 | CH_fan_133 | 7 | 9 | 0.0000000826343 |
| Fragaria x ananassa | Fvb7-4 | 4 | CH_fan_212 | 7 | 12 | 0.00000176533 |
| Fragaria x ananassa | Fvb5-3 | 4 | CH_fan_370 | 6 | 11 | 0.0000925315 |
| Fragaria x ananassa | Fvb7-3 | 4 | CH_fan_453 | 6 | 13 | 0.000337157 |
| Fragaria x ananassa | Fvb7-1 | 4 | CH_fan_510 | 6 | 14 | 0.000584393 |
| Fragaria vesca | Fvb7 | 4 | CH_fve_107 | 10 | 26 | 0.00000000854714 |
| Fragaria vesca | Fvb3 | 4 | CH_fve_109 | 8 | 13 | 0.0000000168397 |
| Fragaria vesca | Fvb2 | 4 | CH_fve_127 | 9 | 22 | 0.0000000703926 |
| Fragaria vesca | Fvb7 | 4 | CH_fve_128 | 9 | 22 | 0.0000000703926 |
| Fragaria vesca | Fvb5 | 4 | CH_fve_135 | 7 | 10 | 0.000000135803 |
| Fragaria vesca | Fvb4 | 4 | CH_fve_136 | 7 | 10 | 0.000000135803 |
| Fragaria vesca | Fvb6 | 4 | CH_fve_181 | 6 | 8 | 0.00000270472 |
| Fragaria vesca | Fvb1 | 4 | CH_fve_217 | 6 | 10 | 0.0000198747 |
| Fragaria vesca | Fvb5 | 4 | CH_fve_239 | 8 | 29 | 0.0000474406 |
| Fragaria vesca | Fvb7 | 4 | CH_fve_266 | 7 | 20 | 0.0000790556 |
| Fragaria vesca | Fvb5 | 4 | CH_fve_268 | 6 | 12 | 0.0000856785 |
| Fragaria vesca | Fvb5 | 4 | CH_fve_30 | 11 | 13 | 0.00000000000000171038 |
| Fragaria vesca | Fvb5 | 4 | CH_fve_374 | 4 | 4 | 0.000697838 |
| Fragaria vesca | Fvb4 | 4 | CH_fve_6 | 16 | 17 | 8.04665e-26 |
| Fragaria vesca | Fvb2 | 4 | CH_fve_82 | 7 | 7 | 0.00000000116762 |
| Gossypium hirsutum | D06 | 4 | CH_ghi_17 | 21 | 28 | 1.10062e-29 |
| Gossypium hirsutum | A01 | 4 | CH_ghi_68 | 12 | 16 | 0.00000000000000226987 |
| Helianthus annuus | HanXRQChr08 | 4 | CH_han_314 | 11 | 43 | 0.000000986141 |
| Prunus persica | Pp02 | 4 | CH_ppe_258 | 7 | 14 | 0.00000680271 |
| Papaver somniferum | NC_039364.1 | 4 | CH_pso_392 | 9 | 42 | 0.0000148971 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 4 | CH_rch_101 | 16 | 54 | 0.0000000000000998239 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 4 | CH_rch_117 | 12 | 24 | 0.000000000000913397 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 4 | CH_rch_126 | 11 | 19 | 0.000000000002272 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 4 | CH_rch_13 | 26 | 55 | 7.88235e-31 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 4 | CH_rch_155 | 11 | 23 | 0.0000000000389195 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 4 | CH_rch_161 | 10 | 17 | 0.0000000000502687 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 4 | CH_rch_163 | 12 | 32 | 0.0000000000699028 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 4 | CH_rch_181 | 11 | 29 | 0.000000000933208 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 4 | CH_rch_203 | 8 | 11 | 0.00000000320414 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 4 | CH_rch_279 | 6 | 6 | 0.000000143194 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 4 | CH_rch_288 | 7 | 10 | 0.000000197211 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 4 | CH_rch_325 | 7 | 11 | 0.000000536711 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 4 | CH_rch_344 | 6 | 7 | 0.000000992168 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 4 | CH_rch_353 | 8 | 19 | 0.00000134885 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 4 | CH_rch_354 | 8 | 19 | 0.00000134885 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 4 | CH_rch_406 | 7 | 14 | 0.00000541017 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 4 | CH_rch_416 | 9 | 33 | 0.00000706233 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 4 | CH_rch_533 | 6 | 11 | 0.000062861 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 4 | CH_rch_61 | 14 | 22 | 1.54683e-17 |
| Salvia bowleyana | GWHASIU00000005 | 4 | CH_sbo_11 | 25 | 51 | 1.61506e-31 |
| Simmondsia chinensis | GWHAASQ00000020 | 4 | CH_sci_232 | 5 | 9 | 0.000405912 |
| Sequoiadendron giganteum | chr10 | 4 | CH_sgi_172 | 12 | 12 | 3.6357e-16 |
| Sapria himalayana | scaffold68_2605431 | 4 | CH_shi_115 | 4 | 6 | 0.00000814964 |
| Solanum lycopersicum | SL4.0ch10 | 4 | CH_sly_224 | 7 | 12 | 0.0000014108 |
| Solanum pennellii | Spenn-ch10 | 4 | CH_spe_232 | 6 | 11 | 0.0000137355 |
| Selenicereus undatus | Scaffold_33677 | 4 | CH_sun_119 | 4 | 4 | 0.000113377 |
| Tripterygium wilfordii | NC_052234.1 | 4 | CH_twi_114 | 8 | 16 | 0.000000244657 |
| Utricularia gibba | unitig_62 | 4 | CH_ugi_34 | 7 | 16 | 0.00000098103 |
| Vanilla planifolia | CM028155.1 | 4 | CH_vpl_8 | 13 | 17 | 1.52001e-18 |
| Vitis vinifera | chr15 | 4 | CH_vvi_217 | 6 | 8 | 0.00000979173 |
| Zea mays | 1 | 4 | CH_zma_96 | 6 | 6 | 0.000000111146 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0008198 | ferrous iron binding | 34 |
| GO:0008199 | ferric iron binding | 12 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |