Functional clusters
Information
- Type Gene Ontology
- Description iron ion binding
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Aethionema arabicum | LG-6 | 3 | CH_aar_35 | 8 | 8 | 0.00000000000579039 |
Acer truncatum | chr5 | 3 | CH_acertr_202 | 11 | 65 | 0.00000333145 |
Avicennia marina | ScioBoG_19538_HRSCAF_19626 | 3 | CH_ama_8 | 8 | 9 | 0.0000000000646826 |
Arabidopsis thaliana | Chr3 | 3 | CH_ath_396 | 5 | 10 | 0.0000700614 |
Amborella trichopoda | AmTr_v1.0_scaffold00086 | 3 | CH_atr_304 | 4 | 4 | 0.00051788 |
Amborella trichopoda | AmTr_v1.0_scaffold00067 | 3 | CH_atr_306 | 6 | 16 | 0.000526626 |
Camellia sinensis var. sinensis | Chr7 | 3 | CH_camsi_66 | 10 | 12 | 0.0000000000000876699 |
Citrus clementina | scaffold_3 | 3 | CH_ccl_235 | 7 | 12 | 0.0000053661 |
Ceratophyllum demersum | 5 | 3 | CH_cde_85 | 6 | 14 | 0.0000265214 |
Corchorus olitorius | AWUE01016288.1 | 3 | CH_col_22 | 7 | 9 | 0.0000000013533 |
Corchorus olitorius | AWUE01015387.1 | 3 | CH_col_24 | 6 | 6 | 0.00000000435344 |
Chenopodium quinoa | C_Quinoa_Scaffold_2939 | 3 | CH_cqu_158 | 7 | 9 | 0.000000182102 |
Chenopodium quinoa | C_Quinoa_Scaffold_1971 | 3 | CH_cqu_396 | 5 | 6 | 0.000151398 |
Chlamydomonas reinhardtii | chromosome_10 | 3 | CH_cre_29 | 7 | 25 | 0.00000138907 |
Eucalyptus grandis | Chr04 | 3 | CH_egr_331 | 15 | 54 | 0.000000000744256 |
Fragaria x ananassa | Fvb5-1 | 3 | CH_fan_133 | 7 | 9 | 0.0000000826343 |
Fragaria x ananassa | Fvb7-4 | 3 | CH_fan_212 | 7 | 12 | 0.00000176533 |
Fragaria x ananassa | Fvb5-3 | 3 | CH_fan_370 | 6 | 11 | 0.0000925315 |
Fragaria x ananassa | Fvb7-3 | 3 | CH_fan_453 | 6 | 13 | 0.000337157 |
Fragaria x ananassa | Fvb7-1 | 3 | CH_fan_510 | 6 | 14 | 0.000584393 |
Fragaria vesca | Fvb7 | 3 | CH_fve_107 | 10 | 26 | 0.00000000854714 |
Fragaria vesca | Fvb3 | 3 | CH_fve_109 | 8 | 13 | 0.0000000168397 |
Fragaria vesca | Fvb2 | 3 | CH_fve_127 | 9 | 22 | 0.0000000703926 |
Fragaria vesca | Fvb7 | 3 | CH_fve_128 | 9 | 22 | 0.0000000703926 |
Fragaria vesca | Fvb5 | 3 | CH_fve_135 | 7 | 10 | 0.000000135803 |
Fragaria vesca | Fvb4 | 3 | CH_fve_136 | 7 | 10 | 0.000000135803 |
Fragaria vesca | Fvb6 | 3 | CH_fve_181 | 6 | 8 | 0.00000270472 |
Fragaria vesca | Fvb1 | 3 | CH_fve_217 | 6 | 10 | 0.0000198747 |
Fragaria vesca | Fvb5 | 3 | CH_fve_239 | 8 | 29 | 0.0000474406 |
Fragaria vesca | Fvb7 | 3 | CH_fve_266 | 7 | 20 | 0.0000790556 |
Fragaria vesca | Fvb5 | 3 | CH_fve_268 | 6 | 12 | 0.0000856785 |
Fragaria vesca | Fvb5 | 3 | CH_fve_30 | 11 | 13 | 0.00000000000000171038 |
Fragaria vesca | Fvb5 | 3 | CH_fve_374 | 4 | 4 | 0.000697838 |
Fragaria vesca | Fvb4 | 3 | CH_fve_6 | 16 | 17 | 8.04665e-26 |
Fragaria vesca | Fvb2 | 3 | CH_fve_82 | 7 | 7 | 0.00000000116762 |
Gossypium hirsutum | D06 | 3 | CH_ghi_17 | 21 | 28 | 1.10062e-29 |
Gossypium hirsutum | A01 | 3 | CH_ghi_68 | 12 | 16 | 0.00000000000000226987 |
Helianthus annuus | HanXRQChr08 | 3 | CH_han_314 | 11 | 43 | 0.000000986141 |
Prunus persica | Pp02 | 3 | CH_ppe_258 | 7 | 14 | 0.00000680271 |
Papaver somniferum | NC_039364.1 | 3 | CH_pso_392 | 9 | 42 | 0.0000148971 |
Rosa chinensis | RcHm_v2.0_Chr1 | 3 | CH_rch_101 | 16 | 54 | 0.0000000000000998239 |
Rosa chinensis | RcHm_v2.0_Chr7 | 3 | CH_rch_117 | 12 | 24 | 0.000000000000913397 |
Rosa chinensis | RcHm_v2.0_Chr5 | 3 | CH_rch_126 | 11 | 19 | 0.000000000002272 |
Rosa chinensis | RcHm_v2.0_Chr4 | 3 | CH_rch_13 | 26 | 55 | 7.88235e-31 |
Rosa chinensis | RcHm_v2.0_Chr5 | 3 | CH_rch_155 | 11 | 23 | 0.0000000000389195 |
Rosa chinensis | RcHm_v2.0_Chr7 | 3 | CH_rch_161 | 10 | 17 | 0.0000000000502687 |
Rosa chinensis | RcHm_v2.0_Chr1 | 3 | CH_rch_163 | 12 | 32 | 0.0000000000699028 |
Rosa chinensis | RcHm_v2.0_Chr6 | 3 | CH_rch_181 | 11 | 29 | 0.000000000933208 |
Rosa chinensis | RcHm_v2.0_Chr7 | 3 | CH_rch_203 | 8 | 11 | 0.00000000320414 |
Rosa chinensis | RcHm_v2.0_Chr1 | 3 | CH_rch_279 | 6 | 6 | 0.000000143194 |
Rosa chinensis | RcHm_v2.0_Chr4 | 3 | CH_rch_288 | 7 | 10 | 0.000000197211 |
Rosa chinensis | RcHm_v2.0_Chr5 | 3 | CH_rch_325 | 7 | 11 | 0.000000536711 |
Rosa chinensis | RcHm_v2.0_Chr4 | 3 | CH_rch_344 | 6 | 7 | 0.000000992168 |
Rosa chinensis | RcHm_v2.0_Chr6 | 3 | CH_rch_353 | 8 | 19 | 0.00000134885 |
Rosa chinensis | RcHm_v2.0_Chr1 | 3 | CH_rch_354 | 8 | 19 | 0.00000134885 |
Rosa chinensis | RcHm_v2.0_Chr4 | 3 | CH_rch_406 | 7 | 14 | 0.00000541017 |
Rosa chinensis | RcHm_v2.0_Chr2 | 3 | CH_rch_416 | 9 | 33 | 0.00000706233 |
Rosa chinensis | RcHm_v2.0_Chr1 | 3 | CH_rch_533 | 6 | 11 | 0.000062861 |
Rosa chinensis | RcHm_v2.0_Chr7 | 3 | CH_rch_61 | 14 | 22 | 1.54683e-17 |
Salvia bowleyana | GWHASIU00000005 | 3 | CH_sbo_11 | 25 | 51 | 1.61506e-31 |
Simmondsia chinensis | GWHAASQ00000020 | 3 | CH_sci_232 | 5 | 9 | 0.000405912 |
Sequoiadendron giganteum | chr10 | 3 | CH_sgi_172 | 12 | 12 | 3.6357e-16 |
Sapria himalayana | scaffold68_2605431 | 3 | CH_shi_115 | 4 | 6 | 0.00000814964 |
Solanum lycopersicum | SL4.0ch10 | 3 | CH_sly_224 | 7 | 12 | 0.0000014108 |
Solanum pennellii | Spenn-ch10 | 3 | CH_spe_232 | 6 | 11 | 0.0000137355 |
Selenicereus undatus | Scaffold_33677 | 3 | CH_sun_119 | 4 | 4 | 0.000113377 |
Tripterygium wilfordii | NC_052234.1 | 3 | CH_twi_114 | 8 | 16 | 0.000000244657 |
Utricularia gibba | unitig_62 | 3 | CH_ugi_34 | 7 | 16 | 0.00000098103 |
Vanilla planifolia | CM028155.1 | 3 | CH_vpl_8 | 13 | 17 | 1.52001e-18 |
Vitis vinifera | chr15 | 3 | CH_vvi_217 | 6 | 8 | 0.00000979173 |
Zea mays | 1 | 3 | CH_zma_96 | 6 | 6 | 0.000000111146 |
Aethionema arabicum | LG-6 | 4 | CH_aar_35 | 8 | 8 | 0.00000000000579039 |
Acer truncatum | chr5 | 4 | CH_acertr_202 | 11 | 65 | 0.00000333145 |
Avicennia marina | ScioBoG_19538_HRSCAF_19626 | 4 | CH_ama_8 | 8 | 9 | 0.0000000000646826 |
Arabidopsis thaliana | Chr3 | 4 | CH_ath_396 | 5 | 10 | 0.0000700614 |
Amborella trichopoda | AmTr_v1.0_scaffold00086 | 4 | CH_atr_304 | 4 | 4 | 0.00051788 |
Amborella trichopoda | AmTr_v1.0_scaffold00067 | 4 | CH_atr_306 | 6 | 16 | 0.000526626 |
Camellia sinensis var. sinensis | Chr7 | 4 | CH_camsi_66 | 10 | 12 | 0.0000000000000876699 |
Citrus clementina | scaffold_3 | 4 | CH_ccl_235 | 7 | 12 | 0.0000053661 |
Ceratophyllum demersum | 5 | 4 | CH_cde_85 | 6 | 14 | 0.0000265214 |
Corchorus olitorius | AWUE01016288.1 | 4 | CH_col_22 | 7 | 9 | 0.0000000013533 |
Corchorus olitorius | AWUE01015387.1 | 4 | CH_col_24 | 6 | 6 | 0.00000000435344 |
Chenopodium quinoa | C_Quinoa_Scaffold_2939 | 4 | CH_cqu_158 | 7 | 9 | 0.000000182102 |
Chenopodium quinoa | C_Quinoa_Scaffold_1971 | 4 | CH_cqu_396 | 5 | 6 | 0.000151398 |
Chlamydomonas reinhardtii | chromosome_10 | 4 | CH_cre_29 | 7 | 25 | 0.00000138907 |
Eucalyptus grandis | Chr04 | 4 | CH_egr_331 | 15 | 54 | 0.000000000744256 |
Fragaria x ananassa | Fvb5-1 | 4 | CH_fan_133 | 7 | 9 | 0.0000000826343 |
Fragaria x ananassa | Fvb7-4 | 4 | CH_fan_212 | 7 | 12 | 0.00000176533 |
Fragaria x ananassa | Fvb5-3 | 4 | CH_fan_370 | 6 | 11 | 0.0000925315 |
Fragaria x ananassa | Fvb7-3 | 4 | CH_fan_453 | 6 | 13 | 0.000337157 |
Fragaria x ananassa | Fvb7-1 | 4 | CH_fan_510 | 6 | 14 | 0.000584393 |
Fragaria vesca | Fvb7 | 4 | CH_fve_107 | 10 | 26 | 0.00000000854714 |
Fragaria vesca | Fvb3 | 4 | CH_fve_109 | 8 | 13 | 0.0000000168397 |
Fragaria vesca | Fvb2 | 4 | CH_fve_127 | 9 | 22 | 0.0000000703926 |
Fragaria vesca | Fvb7 | 4 | CH_fve_128 | 9 | 22 | 0.0000000703926 |
Fragaria vesca | Fvb5 | 4 | CH_fve_135 | 7 | 10 | 0.000000135803 |
Fragaria vesca | Fvb4 | 4 | CH_fve_136 | 7 | 10 | 0.000000135803 |
Fragaria vesca | Fvb6 | 4 | CH_fve_181 | 6 | 8 | 0.00000270472 |
Fragaria vesca | Fvb1 | 4 | CH_fve_217 | 6 | 10 | 0.0000198747 |
Fragaria vesca | Fvb5 | 4 | CH_fve_239 | 8 | 29 | 0.0000474406 |
Fragaria vesca | Fvb7 | 4 | CH_fve_266 | 7 | 20 | 0.0000790556 |
Fragaria vesca | Fvb5 | 4 | CH_fve_268 | 6 | 12 | 0.0000856785 |
Fragaria vesca | Fvb5 | 4 | CH_fve_30 | 11 | 13 | 0.00000000000000171038 |
Fragaria vesca | Fvb5 | 4 | CH_fve_374 | 4 | 4 | 0.000697838 |
Fragaria vesca | Fvb4 | 4 | CH_fve_6 | 16 | 17 | 8.04665e-26 |
Fragaria vesca | Fvb2 | 4 | CH_fve_82 | 7 | 7 | 0.00000000116762 |
Gossypium hirsutum | D06 | 4 | CH_ghi_17 | 21 | 28 | 1.10062e-29 |
Gossypium hirsutum | A01 | 4 | CH_ghi_68 | 12 | 16 | 0.00000000000000226987 |
Helianthus annuus | HanXRQChr08 | 4 | CH_han_314 | 11 | 43 | 0.000000986141 |
Prunus persica | Pp02 | 4 | CH_ppe_258 | 7 | 14 | 0.00000680271 |
Papaver somniferum | NC_039364.1 | 4 | CH_pso_392 | 9 | 42 | 0.0000148971 |
Rosa chinensis | RcHm_v2.0_Chr1 | 4 | CH_rch_101 | 16 | 54 | 0.0000000000000998239 |
Rosa chinensis | RcHm_v2.0_Chr7 | 4 | CH_rch_117 | 12 | 24 | 0.000000000000913397 |
Rosa chinensis | RcHm_v2.0_Chr5 | 4 | CH_rch_126 | 11 | 19 | 0.000000000002272 |
Rosa chinensis | RcHm_v2.0_Chr4 | 4 | CH_rch_13 | 26 | 55 | 7.88235e-31 |
Rosa chinensis | RcHm_v2.0_Chr5 | 4 | CH_rch_155 | 11 | 23 | 0.0000000000389195 |
Rosa chinensis | RcHm_v2.0_Chr7 | 4 | CH_rch_161 | 10 | 17 | 0.0000000000502687 |
Rosa chinensis | RcHm_v2.0_Chr1 | 4 | CH_rch_163 | 12 | 32 | 0.0000000000699028 |
Rosa chinensis | RcHm_v2.0_Chr6 | 4 | CH_rch_181 | 11 | 29 | 0.000000000933208 |
Rosa chinensis | RcHm_v2.0_Chr7 | 4 | CH_rch_203 | 8 | 11 | 0.00000000320414 |
Rosa chinensis | RcHm_v2.0_Chr1 | 4 | CH_rch_279 | 6 | 6 | 0.000000143194 |
Rosa chinensis | RcHm_v2.0_Chr4 | 4 | CH_rch_288 | 7 | 10 | 0.000000197211 |
Rosa chinensis | RcHm_v2.0_Chr5 | 4 | CH_rch_325 | 7 | 11 | 0.000000536711 |
Rosa chinensis | RcHm_v2.0_Chr4 | 4 | CH_rch_344 | 6 | 7 | 0.000000992168 |
Rosa chinensis | RcHm_v2.0_Chr6 | 4 | CH_rch_353 | 8 | 19 | 0.00000134885 |
Rosa chinensis | RcHm_v2.0_Chr1 | 4 | CH_rch_354 | 8 | 19 | 0.00000134885 |
Rosa chinensis | RcHm_v2.0_Chr4 | 4 | CH_rch_406 | 7 | 14 | 0.00000541017 |
Rosa chinensis | RcHm_v2.0_Chr2 | 4 | CH_rch_416 | 9 | 33 | 0.00000706233 |
Rosa chinensis | RcHm_v2.0_Chr1 | 4 | CH_rch_533 | 6 | 11 | 0.000062861 |
Rosa chinensis | RcHm_v2.0_Chr7 | 4 | CH_rch_61 | 14 | 22 | 1.54683e-17 |
Salvia bowleyana | GWHASIU00000005 | 4 | CH_sbo_11 | 25 | 51 | 1.61506e-31 |
Simmondsia chinensis | GWHAASQ00000020 | 4 | CH_sci_232 | 5 | 9 | 0.000405912 |
Sequoiadendron giganteum | chr10 | 4 | CH_sgi_172 | 12 | 12 | 3.6357e-16 |
Sapria himalayana | scaffold68_2605431 | 4 | CH_shi_115 | 4 | 6 | 0.00000814964 |
Solanum lycopersicum | SL4.0ch10 | 4 | CH_sly_224 | 7 | 12 | 0.0000014108 |
Solanum pennellii | Spenn-ch10 | 4 | CH_spe_232 | 6 | 11 | 0.0000137355 |
Selenicereus undatus | Scaffold_33677 | 4 | CH_sun_119 | 4 | 4 | 0.000113377 |
Tripterygium wilfordii | NC_052234.1 | 4 | CH_twi_114 | 8 | 16 | 0.000000244657 |
Utricularia gibba | unitig_62 | 4 | CH_ugi_34 | 7 | 16 | 0.00000098103 |
Vanilla planifolia | CM028155.1 | 4 | CH_vpl_8 | 13 | 17 | 1.52001e-18 |
Vitis vinifera | chr15 | 4 | CH_vvi_217 | 6 | 8 | 0.00000979173 |
Zea mays | 1 | 4 | CH_zma_96 | 6 | 6 | 0.000000111146 |
Available child term results
Ontology identifier | Description | Number of clusters |
---|---|---|
GO:0008198 | ferrous iron binding | 34 |
GO:0008199 | ferric iron binding | 12 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |