Functional clusters

Information

  • Type Gene Ontology
  • Description tryptophan synthase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr10 3 CH_acertr_500 2 2 0.00070497
Aquilegia oxysepala CHR02 3 CH_aox_108 3 5 0.00000192913
Brassica napus C08 3 CH_bna_654 3 16 0.000750817
Camellia sinensis var. sinensis Chr7 3 CH_camsi_114 4 4 0.000000000036448
Camellia sinensis var. sinensis Chr8 3 CH_camsi_369 3 5 0.00000264874
Carica papaya supercontig_52 3 CH_cpa_268 2 2 0.000570396
Fragaria x ananassa Fvb6-3 3 CH_fan_285 3 6 0.0000136557
Lupinus albus Lalb_Chr02 3 CH_lal_405 2 2 0.000787236
Magnolia biondii Chr02 3 CH_mbi_79 5 18 0.0000000000200007
Oryza sativa ssp. japonica chr03 3 CH_osa_59 4 4 0.0000000000154678
Acer truncatum chr10 4 CH_acertr_500 2 2 0.00070497
Aquilegia oxysepala CHR02 4 CH_aox_108 3 5 0.00000192913
Brassica napus C08 4 CH_bna_654 3 16 0.000750817
Camellia sinensis var. sinensis Chr7 4 CH_camsi_114 4 4 0.000000000036448
Camellia sinensis var. sinensis Chr8 4 CH_camsi_369 3 5 0.00000264874
Carica papaya supercontig_52 4 CH_cpa_268 2 2 0.000570396
Fragaria x ananassa Fvb6-3 4 CH_fan_285 3 6 0.0000136557
Lupinus albus Lalb_Chr02 4 CH_lal_405 2 2 0.000787236
Magnolia biondii Chr02 4 CH_mbi_79 5 18 0.0000000000200007
Oryza sativa ssp. japonica chr03 4 CH_osa_59 4 4 0.0000000000154678

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001