Functional clusters
Information
- Type Gene Ontology
- Description thioredoxin-disulfide reductase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Beta vulgaris | Chr6_EL10_PGA_scaffold0 | 3 | CH_bvu_86 | 3 | 3 | 0.000000205643 |
| Camellia sinensis var. sinensis | Chr13 | 3 | CH_camsi_286 | 4 | 14 | 0.000000289251 |
| Camellia sinensis var. sinensis | Chr10 | 3 | CH_camsi_339 | 3 | 3 | 0.00000114808 |
| Cannabis sativa | NC_044373.1 | 3 | CH_cansat_126 | 3 | 3 | 0.000000226376 |
| Carpinus fangiana | Cfa03 | 3 | CH_cfa_65 | 4 | 5 | 0.000000000456093 |
| Carica papaya | supercontig_69 | 3 | CH_cpa_73 | 3 | 3 | 0.00000027114 |
| Eucalyptus grandis | Chr08 | 3 | CH_egr_144 | 6 | 7 | 9.99539e-17 |
| Erythranthe guttata | scaffold_5 | 3 | CH_egut_416 | 2 | 2 | 0.000728147 |
| Fragaria vesca | Fvb4 | 3 | CH_fve_392 | 2 | 2 | 0.000883652 |
| Hydrangea macrophylla | Hma1.2p1_0160F.1 | 3 | CH_hma_271 | 2 | 2 | 0.000333259 |
| Magnolia biondii | Chr19 | 3 | CH_mbi_616 | 2 | 2 | 0.000485661 |
| Malus domestica | Chr16 | 3 | CH_mdo_115 | 4 | 5 | 0.00000000040486 |
| Nicotiana tabacum | Nitab4.5_0000203 | 3 | CH_nta_145 | 2 | 2 | 0.000658364 |
| Olea europaea | scaffold1119 | 3 | CH_oeu_341 | 2 | 2 | 0.000533789 |
| Petunia axillaris | Peaxi162Scf00338 | 3 | CH_pax_121 | 3 | 5 | 0.00000148469 |
| Prunus persica | Pp01 | 3 | CH_ppe_214 | 3 | 3 | 0.000000467444 |
| Populus trichocarpa | Chr10 | 3 | CH_ptr_11 | 9 | 9 | 2.02177e-27 |
| Quercus lobata | 3 | 3 | CH_qlo_142 | 6 | 8 | 0.00000000000000115645 |
| Rhododendron simsii | chr12 | 3 | CH_rsi_108 | 4 | 4 | 0.0000000000282183 |
| Salix brachista | GWHAAZH00000010 | 3 | CH_sbr_18 | 6 | 6 | 2.06621e-17 |
| Simmondsia chinensis | GWHAASQ00000004 | 3 | CH_sci_75 | 3 | 3 | 0.000000608964 |
| Sequoiadendron giganteum | chr6 | 3 | CH_sgi_407 | 4 | 4 | 0.000000000347199 |
| Trochodendron aralioides | group13 | 3 | CH_tar_164 | 3 | 3 | 0.000000892115 |
| Vaccinium macrocarpon | chr4_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_55 | 4 | 4 | 0.0000000000842619 |
| Vitis vinifera | chr1 | 3 | CH_vvi_109 | 4 | 9 | 0.00000000249424 |
| Beta vulgaris | Chr6_EL10_PGA_scaffold0 | 4 | CH_bvu_86 | 3 | 3 | 0.000000205643 |
| Camellia sinensis var. sinensis | Chr13 | 4 | CH_camsi_286 | 4 | 14 | 0.000000289251 |
| Camellia sinensis var. sinensis | Chr10 | 4 | CH_camsi_339 | 3 | 3 | 0.00000114808 |
| Cannabis sativa | NC_044373.1 | 4 | CH_cansat_126 | 3 | 3 | 0.000000226376 |
| Carpinus fangiana | Cfa03 | 4 | CH_cfa_65 | 4 | 5 | 0.000000000456093 |
| Carica papaya | supercontig_69 | 4 | CH_cpa_73 | 3 | 3 | 0.00000027114 |
| Eucalyptus grandis | Chr08 | 4 | CH_egr_144 | 6 | 7 | 9.99539e-17 |
| Erythranthe guttata | scaffold_5 | 4 | CH_egut_416 | 2 | 2 | 0.000728147 |
| Fragaria vesca | Fvb4 | 4 | CH_fve_392 | 2 | 2 | 0.000883652 |
| Hydrangea macrophylla | Hma1.2p1_0160F.1 | 4 | CH_hma_271 | 2 | 2 | 0.000333259 |
| Magnolia biondii | Chr19 | 4 | CH_mbi_616 | 2 | 2 | 0.000485661 |
| Malus domestica | Chr16 | 4 | CH_mdo_115 | 4 | 5 | 0.00000000040486 |
| Nicotiana tabacum | Nitab4.5_0000203 | 4 | CH_nta_145 | 2 | 2 | 0.000658364 |
| Olea europaea | scaffold1119 | 4 | CH_oeu_341 | 2 | 2 | 0.000533789 |
| Petunia axillaris | Peaxi162Scf00338 | 4 | CH_pax_121 | 3 | 5 | 0.00000148469 |
| Prunus persica | Pp01 | 4 | CH_ppe_214 | 3 | 3 | 0.000000467444 |
| Populus trichocarpa | Chr10 | 4 | CH_ptr_11 | 9 | 9 | 2.02177e-27 |
| Quercus lobata | 3 | 4 | CH_qlo_142 | 6 | 8 | 0.00000000000000115645 |
| Rhododendron simsii | chr12 | 4 | CH_rsi_108 | 4 | 4 | 0.0000000000282183 |
| Salix brachista | GWHAAZH00000010 | 4 | CH_sbr_18 | 6 | 6 | 2.06621e-17 |
| Simmondsia chinensis | GWHAASQ00000004 | 4 | CH_sci_75 | 3 | 3 | 0.000000608964 |
| Sequoiadendron giganteum | chr6 | 4 | CH_sgi_407 | 4 | 4 | 0.000000000347199 |
| Trochodendron aralioides | group13 | 4 | CH_tar_164 | 3 | 3 | 0.000000892115 |
| Vaccinium macrocarpon | chr4_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_55 | 4 | 4 | 0.0000000000842619 |
| Vitis vinifera | chr1 | 4 | CH_vvi_109 | 4 | 9 | 0.00000000249424 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |