Functional clusters

Information

  • Type Gene Ontology
  • Description phosphoglycerate kinase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr1 3 CH_acertr_68 4 10 0.00000000110332
Actinidia chinensis Lachesis_group9 3 CH_ach_261 2 2 0.000814819
Actinidia chinensis Lachesis_group9 3 CH_ach_262 2 2 0.000814819
Aquilegia oxysepala CHR03 3 CH_aox_304 2 2 0.000801989
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.18 3 CH_arhy_609 2 2 0.000449075
Brassica carinata ChrB02 3 CH_bca_1004 2 2 0.000961939
Brassica oleracea C6 3 CH_bol_381 2 2 0.000686409
Brassica rapa A07 3 CH_bra_311 2 2 0.000901558
Capsicum annuum PGAv.1.6.scaffold943 3 CH_can_379 2 2 0.000247831
Cicer arietinum L. Ca_LG1_v3 3 CH_car_212 2 2 0.000778301
Corylus avellana 4 3 CH_cav_399 2 3 0.000689981
Citrus clementina scaffold_9 3 CH_ccl_349 2 2 0.000246093
Carpinus fangiana Cfa08 3 CH_cfa_266 2 2 0.000227204
Carya illinoinensis Chr11 3 CH_cil_457 2 2 0.000371897
Chenopodium quinoa C_Quinoa_Scaffold_1477 3 CH_cqu_529 2 2 0.000710732
Davidia involucrata GWHABJS00000013 3 CH_din_331 2 2 0.000300075
Durio zibethinus NW_019167860.1 3 CH_dzi_144 3 6 0.00000225505
Durio zibethinus NW_019167993.1 3 CH_dzi_364 2 2 0.000973326
Erythranthe guttata scaffold_8 3 CH_egut_333 2 2 0.000218444
Fragaria vesca Fvb6 3 CH_fve_365 2 2 0.000589102
Gossypium hirsutum A01 3 CH_ghi_691 2 2 0.000961256
Gossypium hirsutum D01 3 CH_ghi_692 2 2 0.000961256
Glycine max Gm15 3 CH_gma_476 2 2 0.000569336
Glycine max Gm08 3 CH_gma_477 2 2 0.000569336
Gossypium raimondii Chr02 3 CH_gra_255 2 2 0.000160832
Lupinus albus Lalb_Chr25 3 CH_lal_327 2 2 0.000314895
Lotus japonicus chr3 3 CH_lja_278 2 2 0.000214523
Lonicera japonica GWHAAZE00000002 3 CH_lonja_444 2 2 0.000179662
Manihot esculenta Chromosome06 3 CH_mes_401 2 2 0.000610631
Manihot esculenta Chromosome14 3 CH_mes_402 2 2 0.000610631
Medicago truncatula chr2 3 CH_mtr_261 3 4 0.0000000405134
Petunia axillaris Peaxi162Scf00452 3 CH_pax_254 2 2 0.000211067
Punica granatum NC_045127.1 3 CH_pgr_320 2 2 0.000225107
Pisum sativum chr1LG6 3 CH_psa_319 2 2 0.000312981
Papaver somniferum NW_020648748.1 3 CH_pso_278 3 3 0.000000346422
Populus trichocarpa Chr10 3 CH_ptr_425 2 2 0.000578001
Populus trichocarpa Chr08 3 CH_ptr_426 2 2 0.000578001
Quercus lobata 4 3 CH_qlo_965 2 2 0.000516289
Rhododendron simsii chr04 3 CH_rsi_505 2 2 0.000645307
Striga asiatica scaffold186 3 CH_sas_118 2 2 0.000938057
Salvia bowleyana GWHASIU00000004 3 CH_sbo_373 2 2 0.000136494
Salix brachista GWHAAZH00000008 3 CH_sbr_148 3 4 0.000000476457
Salix brachista GWHAAZH00000010 3 CH_sbr_387 2 2 0.000945209
Simmondsia chinensis GWHAASQ00000020 3 CH_sci_244 2 2 0.000510856
Solanum lycopersicum SL4.0ch07 3 CH_sly_430 2 2 0.000176082
Solanum pennellii Spenn-ch07 3 CH_spe_341 2 2 0.000133437
Solanum tuberosum ST4.03ch07 3 CH_stu_464 2 2 0.000153736
Theobroma cacao Chromosome_7 3 CH_tca_326 2 2 0.000219716
Tarenaya hassleriana NW_010965869.1 3 CH_tha_159 2 2 0.000419082
Trifolium pratense Tp57577_TGAC_v2_LG7 3 CH_tpr_217 2 2 0.0000756974
Tripterygium wilfordii NC_052252.1 3 CH_twi_279 2 2 0.000334728
Vaccinium macrocarpon chr6_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_392 2 2 0.000929238
Vitis vinifera chr19 3 CH_vvi_329 2 2 0.000228189
Acer truncatum chr1 4 CH_acertr_68 4 10 0.00000000110332
Actinidia chinensis Lachesis_group9 4 CH_ach_261 2 2 0.000814819
Actinidia chinensis Lachesis_group9 4 CH_ach_262 2 2 0.000814819
Aquilegia oxysepala CHR03 4 CH_aox_304 2 2 0.000801989
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.18 4 CH_arhy_609 2 2 0.000449075
Brassica carinata ChrB02 4 CH_bca_1004 2 2 0.000961939
Brassica oleracea C6 4 CH_bol_381 2 2 0.000686409
Brassica rapa A07 4 CH_bra_311 2 2 0.000901558
Capsicum annuum PGAv.1.6.scaffold943 4 CH_can_379 2 2 0.000247831
Cicer arietinum L. Ca_LG1_v3 4 CH_car_212 2 2 0.000778301
Corylus avellana 4 4 CH_cav_399 2 3 0.000689981
Citrus clementina scaffold_9 4 CH_ccl_349 2 2 0.000246093
Carpinus fangiana Cfa08 4 CH_cfa_266 2 2 0.000227204
Carya illinoinensis Chr11 4 CH_cil_457 2 2 0.000371897
Chenopodium quinoa C_Quinoa_Scaffold_1477 4 CH_cqu_529 2 2 0.000710732
Davidia involucrata GWHABJS00000013 4 CH_din_331 2 2 0.000300075
Durio zibethinus NW_019167860.1 4 CH_dzi_144 3 6 0.00000225505
Durio zibethinus NW_019167993.1 4 CH_dzi_364 2 2 0.000973326
Erythranthe guttata scaffold_8 4 CH_egut_333 2 2 0.000218444
Fragaria vesca Fvb6 4 CH_fve_365 2 2 0.000589102
Gossypium hirsutum A01 4 CH_ghi_691 2 2 0.000961256
Gossypium hirsutum D01 4 CH_ghi_692 2 2 0.000961256
Glycine max Gm15 4 CH_gma_476 2 2 0.000569336
Glycine max Gm08 4 CH_gma_477 2 2 0.000569336
Gossypium raimondii Chr02 4 CH_gra_255 2 2 0.000160832
Lupinus albus Lalb_Chr25 4 CH_lal_327 2 2 0.000314895
Lotus japonicus chr3 4 CH_lja_278 2 2 0.000214523
Lonicera japonica GWHAAZE00000002 4 CH_lonja_444 2 2 0.000179662
Manihot esculenta Chromosome06 4 CH_mes_401 2 2 0.000610631
Manihot esculenta Chromosome14 4 CH_mes_402 2 2 0.000610631
Medicago truncatula chr2 4 CH_mtr_261 3 4 0.0000000405134
Petunia axillaris Peaxi162Scf00452 4 CH_pax_254 2 2 0.000211067
Punica granatum NC_045127.1 4 CH_pgr_320 2 2 0.000225107
Pisum sativum chr1LG6 4 CH_psa_319 2 2 0.000312981
Papaver somniferum NW_020648748.1 4 CH_pso_278 3 3 0.000000346422
Populus trichocarpa Chr10 4 CH_ptr_425 2 2 0.000578001
Populus trichocarpa Chr08 4 CH_ptr_426 2 2 0.000578001
Quercus lobata 4 4 CH_qlo_965 2 2 0.000516289
Rhododendron simsii chr04 4 CH_rsi_505 2 2 0.000645307
Striga asiatica scaffold186 4 CH_sas_118 2 2 0.000938057
Salvia bowleyana GWHASIU00000004 4 CH_sbo_373 2 2 0.000136494
Salix brachista GWHAAZH00000008 4 CH_sbr_148 3 4 0.000000476457
Salix brachista GWHAAZH00000010 4 CH_sbr_387 2 2 0.000945209
Simmondsia chinensis GWHAASQ00000020 4 CH_sci_244 2 2 0.000510856
Solanum lycopersicum SL4.0ch07 4 CH_sly_430 2 2 0.000176082
Solanum pennellii Spenn-ch07 4 CH_spe_341 2 2 0.000133437
Solanum tuberosum ST4.03ch07 4 CH_stu_464 2 2 0.000153736
Theobroma cacao Chromosome_7 4 CH_tca_326 2 2 0.000219716
Tarenaya hassleriana NW_010965869.1 4 CH_tha_159 2 2 0.000419082
Trifolium pratense Tp57577_TGAC_v2_LG7 4 CH_tpr_217 2 2 0.0000756974
Tripterygium wilfordii NC_052252.1 4 CH_twi_279 2 2 0.000334728
Vaccinium macrocarpon chr6_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_392 2 2 0.000929238
Vitis vinifera chr19 4 CH_vvi_329 2 2 0.000228189

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001