Functional clusters
Information
- Type Gene Ontology
- Description phosphoenolpyruvate carboxykinase (ATP) activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Actinidia chinensis | Lachesis_group28 | 3 | CH_ach_228 | 2 | 2 | 0.000543213 |
| Amborella trichopoda | AmTr_v1.0_scaffold00184 | 3 | CH_atr_13 | 7 | 8 | 1.90098e-20 |
| Brassica carinata | ChrC03 | 3 | CH_bca_700 | 2 | 2 | 0.000213764 |
| Brassica napus | A06 | 3 | CH_bna_641 | 2 | 2 | 0.00066822 |
| Chara braunii | BFEA01000051 | 3 | CH_cbr_2 | 8 | 12 | 3.77317e-20 |
| Ceratophyllum demersum | 5 | 3 | CH_cde_207 | 2 | 2 | 0.000789796 |
| Durio zibethinus | NW_019167860.1 | 3 | CH_dzi_104 | 3 | 3 | 0.000000112784 |
| Fragaria x ananassa | Fvb1-3 | 3 | CH_fan_71 | 4 | 4 | 0.000000000284148 |
| Glycine max | Gm08 | 3 | CH_gma_519 | 2 | 2 | 0.00079707 |
| Lupinus albus | Lalb_Chr05 | 3 | CH_lal_401 | 2 | 2 | 0.000787236 |
| Magnolia biondii | Chr16 | 3 | CH_mbi_542 | 2 | 2 | 0.000291397 |
| Olea europaea | chr22 | 3 | CH_oeu_165 | 2 | 2 | 0.0000533789 |
| Prunus persica | Pp06 | 3 | CH_ppe_425 | 2 | 2 | 0.000447577 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 3 | CH_rch_268 | 3 | 3 | 0.0000000834367 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 3 | CH_rch_768 | 2 | 2 | 0.00083717 |
| Sequoiadendron giganteum | chr2 | 3 | CH_sgi_328 | 4 | 4 | 0.0000000000121398 |
| Solanum pennellii | Spenn-ch12 | 3 | CH_spe_123 | 3 | 3 | 0.0000000296764 |
| Solanum tuberosum | ST4.03ch12 | 3 | CH_stu_524 | 2 | 2 | 0.000307472 |
| Trifolium pratense | Tp57577_TGAC_v2_LG2 | 3 | CH_tpr_272 | 2 | 2 | 0.000227092 |
| Zea mays | 8 | 3 | CH_zma_136 | 3 | 4 | 0.00000188212 |
| Actinidia chinensis | Lachesis_group28 | 4 | CH_ach_228 | 2 | 2 | 0.000543213 |
| Amborella trichopoda | AmTr_v1.0_scaffold00184 | 4 | CH_atr_13 | 7 | 8 | 1.90098e-20 |
| Brassica carinata | ChrC03 | 4 | CH_bca_700 | 2 | 2 | 0.000213764 |
| Brassica napus | A06 | 4 | CH_bna_641 | 2 | 2 | 0.00066822 |
| Chara braunii | BFEA01000051 | 4 | CH_cbr_2 | 8 | 12 | 3.77317e-20 |
| Ceratophyllum demersum | 5 | 4 | CH_cde_207 | 2 | 2 | 0.000789796 |
| Durio zibethinus | NW_019167860.1 | 4 | CH_dzi_104 | 3 | 3 | 0.000000112784 |
| Fragaria x ananassa | Fvb1-3 | 4 | CH_fan_71 | 4 | 4 | 0.000000000284148 |
| Glycine max | Gm08 | 4 | CH_gma_519 | 2 | 2 | 0.00079707 |
| Lupinus albus | Lalb_Chr05 | 4 | CH_lal_401 | 2 | 2 | 0.000787236 |
| Magnolia biondii | Chr16 | 4 | CH_mbi_542 | 2 | 2 | 0.000291397 |
| Olea europaea | chr22 | 4 | CH_oeu_165 | 2 | 2 | 0.0000533789 |
| Prunus persica | Pp06 | 4 | CH_ppe_425 | 2 | 2 | 0.000447577 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 4 | CH_rch_268 | 3 | 3 | 0.0000000834367 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 4 | CH_rch_768 | 2 | 2 | 0.00083717 |
| Sequoiadendron giganteum | chr2 | 4 | CH_sgi_328 | 4 | 4 | 0.0000000000121398 |
| Solanum pennellii | Spenn-ch12 | 4 | CH_spe_123 | 3 | 3 | 0.0000000296764 |
| Solanum tuberosum | ST4.03ch12 | 4 | CH_stu_524 | 2 | 2 | 0.000307472 |
| Trifolium pratense | Tp57577_TGAC_v2_LG2 | 4 | CH_tpr_272 | 2 | 2 | 0.000227092 |
| Zea mays | 8 | 4 | CH_zma_136 | 3 | 4 | 0.00000188212 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |