Functional clusters
Information
- Type Gene Ontology
- Description phosphatidylserine decarboxylase activity
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Actinidia chinensis | Lachesis_group23 | 3 | CH_ach_266 | 2 | 2 | 0.000814819 |
Actinidia chinensis | Lachesis_group6 | 3 | CH_ach_267 | 2 | 2 | 0.000814819 |
Brassica napus | C07 | 3 | CH_bna_78 | 4 | 4 | 0.0000000000261888 |
Brassica oleracea | C7 | 3 | CH_bol_397 | 2 | 2 | 0.000915212 |
Corylus avellana | 9 | 3 | CH_cav_75 | 4 | 8 | 0.00000000141924 |
Chara braunii | BFEA01000116 | 3 | CH_cbr_128 | 2 | 3 | 0.000215773 |
Coffea canephora | chr2 | 3 | CH_ccan_313 | 2 | 10 | 0.000268306 |
Citrus clementina | scaffold_5 | 3 | CH_ccl_352 | 2 | 3 | 0.000246093 |
Ceratophyllum demersum | 2 | 3 | CH_cde_145 | 2 | 2 | 0.000236939 |
Davidia involucrata | GWHABJS00000005 | 3 | CH_din_281 | 2 | 2 | 0.000150038 |
Erythranthe guttata | scaffold_2 | 3 | CH_egut_336 | 2 | 2 | 0.000218444 |
Gossypium hirsutum | A12 | 3 | CH_ghi_664 | 2 | 3 | 0.000801015 |
Lonicera japonica | GWHAAZE00000002 | 3 | CH_lonja_503 | 2 | 2 | 0.000359324 |
Olea europaea | chr16 | 3 | CH_oeu_49 | 3 | 3 | 0.0000000170963 |
Salvia bowleyana | GWHASIU00000003 | 3 | CH_sbo_243 | 3 | 12 | 0.00000273157 |
Sequoiadendron giganteum | chr7 | 3 | CH_sgi_1212 | 2 | 2 | 0.000292291 |
Sapria himalayana | scaffold3_21451142 | 3 | CH_shi_163 | 2 | 2 | 0.0000571804 |
Selenicereus undatus | Scaffold_33680 | 3 | CH_sun_158 | 2 | 2 | 0.000217992 |
Vaccinium macrocarpon | chr1_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_297 | 2 | 2 | 0.000278772 |
Vitis vinifera | chr12 | 3 | CH_vvi_147 | 3 | 3 | 0.000000086787 |
Actinidia chinensis | Lachesis_group23 | 4 | CH_ach_266 | 2 | 2 | 0.000814819 |
Actinidia chinensis | Lachesis_group6 | 4 | CH_ach_267 | 2 | 2 | 0.000814819 |
Brassica napus | C07 | 4 | CH_bna_78 | 4 | 4 | 0.0000000000261888 |
Brassica oleracea | C7 | 4 | CH_bol_397 | 2 | 2 | 0.000915212 |
Corylus avellana | 9 | 4 | CH_cav_75 | 4 | 8 | 0.00000000141924 |
Chara braunii | BFEA01000116 | 4 | CH_cbr_128 | 2 | 3 | 0.000215773 |
Coffea canephora | chr2 | 4 | CH_ccan_313 | 2 | 10 | 0.000268306 |
Citrus clementina | scaffold_5 | 4 | CH_ccl_352 | 2 | 3 | 0.000246093 |
Ceratophyllum demersum | 2 | 4 | CH_cde_145 | 2 | 2 | 0.000236939 |
Davidia involucrata | GWHABJS00000005 | 4 | CH_din_281 | 2 | 2 | 0.000150038 |
Erythranthe guttata | scaffold_2 | 4 | CH_egut_336 | 2 | 2 | 0.000218444 |
Gossypium hirsutum | A12 | 4 | CH_ghi_664 | 2 | 3 | 0.000801015 |
Lonicera japonica | GWHAAZE00000002 | 4 | CH_lonja_503 | 2 | 2 | 0.000359324 |
Olea europaea | chr16 | 4 | CH_oeu_49 | 3 | 3 | 0.0000000170963 |
Salvia bowleyana | GWHASIU00000003 | 4 | CH_sbo_243 | 3 | 12 | 0.00000273157 |
Sequoiadendron giganteum | chr7 | 4 | CH_sgi_1212 | 2 | 2 | 0.000292291 |
Sapria himalayana | scaffold3_21451142 | 4 | CH_shi_163 | 2 | 2 | 0.0000571804 |
Selenicereus undatus | Scaffold_33680 | 4 | CH_sun_158 | 2 | 2 | 0.000217992 |
Vaccinium macrocarpon | chr1_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_297 | 2 | 2 | 0.000278772 |
Vitis vinifera | chr12 | 4 | CH_vvi_147 | 3 | 3 | 0.000000086787 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |