Functional clusters

Information

  • Type Gene Ontology
  • Description phosphatidylserine decarboxylase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group23 3 CH_ach_266 2 2 0.000814819
Actinidia chinensis Lachesis_group6 3 CH_ach_267 2 2 0.000814819
Brassica napus C07 3 CH_bna_78 4 4 0.0000000000261888
Brassica oleracea C7 3 CH_bol_397 2 2 0.000915212
Corylus avellana 9 3 CH_cav_75 4 8 0.00000000141924
Chara braunii BFEA01000116 3 CH_cbr_128 2 3 0.000215773
Coffea canephora chr2 3 CH_ccan_313 2 10 0.000268306
Citrus clementina scaffold_5 3 CH_ccl_352 2 3 0.000246093
Ceratophyllum demersum 2 3 CH_cde_145 2 2 0.000236939
Davidia involucrata GWHABJS00000005 3 CH_din_281 2 2 0.000150038
Erythranthe guttata scaffold_2 3 CH_egut_336 2 2 0.000218444
Gossypium hirsutum A12 3 CH_ghi_664 2 3 0.000801015
Lonicera japonica GWHAAZE00000002 3 CH_lonja_503 2 2 0.000359324
Olea europaea chr16 3 CH_oeu_49 3 3 0.0000000170963
Salvia bowleyana GWHASIU00000003 3 CH_sbo_243 3 12 0.00000273157
Sequoiadendron giganteum chr7 3 CH_sgi_1212 2 2 0.000292291
Sapria himalayana scaffold3_21451142 3 CH_shi_163 2 2 0.0000571804
Selenicereus undatus Scaffold_33680 3 CH_sun_158 2 2 0.000217992
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_297 2 2 0.000278772
Vitis vinifera chr12 3 CH_vvi_147 3 3 0.000000086787
Actinidia chinensis Lachesis_group23 4 CH_ach_266 2 2 0.000814819
Actinidia chinensis Lachesis_group6 4 CH_ach_267 2 2 0.000814819
Brassica napus C07 4 CH_bna_78 4 4 0.0000000000261888
Brassica oleracea C7 4 CH_bol_397 2 2 0.000915212
Corylus avellana 9 4 CH_cav_75 4 8 0.00000000141924
Chara braunii BFEA01000116 4 CH_cbr_128 2 3 0.000215773
Coffea canephora chr2 4 CH_ccan_313 2 10 0.000268306
Citrus clementina scaffold_5 4 CH_ccl_352 2 3 0.000246093
Ceratophyllum demersum 2 4 CH_cde_145 2 2 0.000236939
Davidia involucrata GWHABJS00000005 4 CH_din_281 2 2 0.000150038
Erythranthe guttata scaffold_2 4 CH_egut_336 2 2 0.000218444
Gossypium hirsutum A12 4 CH_ghi_664 2 3 0.000801015
Lonicera japonica GWHAAZE00000002 4 CH_lonja_503 2 2 0.000359324
Olea europaea chr16 4 CH_oeu_49 3 3 0.0000000170963
Salvia bowleyana GWHASIU00000003 4 CH_sbo_243 3 12 0.00000273157
Sequoiadendron giganteum chr7 4 CH_sgi_1212 2 2 0.000292291
Sapria himalayana scaffold3_21451142 4 CH_shi_163 2 2 0.0000571804
Selenicereus undatus Scaffold_33680 4 CH_sun_158 2 2 0.000217992
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_297 2 2 0.000278772
Vitis vinifera chr12 4 CH_vvi_147 3 3 0.000000086787

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001