Functional clusters
Information
- Type Gene Ontology
- Description glutathione peroxidase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Avicennia marina | ScioBoG_102834_HRSCAF_103055 | 3 | CH_ama_27 | 3 | 3 | 0.000000936749 |
| Camellia sinensis var. sinensis | Chr12 | 3 | CH_camsi_314 | 4 | 27 | 0.000000637978 |
| Coffea canephora | chr8 | 3 | CH_ccan_76 | 3 | 10 | 0.0000000533244 |
| Corchorus olitorius | AWUE01022397.1 | 3 | CH_col_94 | 2 | 2 | 0.000292099 |
| Carica papaya | supercontig_74 | 3 | CH_cpa_309 | 2 | 2 | 0.000950661 |
| Davidia involucrata | GWHABJS00000003 | 3 | CH_din_413 | 2 | 2 | 0.000750188 |
| Eucalyptus grandis | Chr11 | 3 | CH_egr_109 | 7 | 8 | 1.6298e-19 |
| Fragaria x ananassa | Fvb5-2 | 3 | CH_fan_271 | 3 | 5 | 0.00000909281 |
| Fragaria vesca | Fvb5 | 3 | CH_fve_75 | 4 | 6 | 0.000000000643891 |
| Magnolia biondii | Chr18 | 3 | CH_mbi_74 | 5 | 9 | 0.000000000010518 |
| Malus domestica | Chr06 | 3 | CH_mdo_105 | 4 | 4 | 0.000000000223318 |
| Malus domestica | Chr14 | 3 | CH_mdo_275 | 3 | 3 | 0.000000981464 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 3 | CH_rch_335 | 3 | 4 | 0.000000800904 |
| Solanum tuberosum | ST4.03ch12 | 3 | CH_stu_624 | 2 | 2 | 0.000768679 |
| Tripterygium wilfordii | NC_052251.1 | 3 | CH_twi_157 | 3 | 5 | 0.00000560035 |
| Avicennia marina | ScioBoG_102834_HRSCAF_103055 | 4 | CH_ama_27 | 3 | 3 | 0.000000936749 |
| Camellia sinensis var. sinensis | Chr12 | 4 | CH_camsi_314 | 4 | 27 | 0.000000637978 |
| Coffea canephora | chr8 | 4 | CH_ccan_76 | 3 | 10 | 0.0000000533244 |
| Corchorus olitorius | AWUE01022397.1 | 4 | CH_col_94 | 2 | 2 | 0.000292099 |
| Carica papaya | supercontig_74 | 4 | CH_cpa_309 | 2 | 2 | 0.000950661 |
| Davidia involucrata | GWHABJS00000003 | 4 | CH_din_413 | 2 | 2 | 0.000750188 |
| Eucalyptus grandis | Chr11 | 4 | CH_egr_109 | 7 | 8 | 1.6298e-19 |
| Fragaria x ananassa | Fvb5-2 | 4 | CH_fan_271 | 3 | 5 | 0.00000909281 |
| Fragaria vesca | Fvb5 | 4 | CH_fve_75 | 4 | 6 | 0.000000000643891 |
| Magnolia biondii | Chr18 | 4 | CH_mbi_74 | 5 | 9 | 0.000000000010518 |
| Malus domestica | Chr06 | 4 | CH_mdo_105 | 4 | 4 | 0.000000000223318 |
| Malus domestica | Chr14 | 4 | CH_mdo_275 | 3 | 3 | 0.000000981464 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 4 | CH_rch_335 | 3 | 4 | 0.000000800904 |
| Solanum tuberosum | ST4.03ch12 | 4 | CH_stu_624 | 2 | 2 | 0.000768679 |
| Tripterygium wilfordii | NC_052251.1 | 4 | CH_twi_157 | 3 | 5 | 0.00000560035 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |