Functional clusters
Information
- Type Gene Ontology
- Description oxoglutarate dehydrogenase (succinyl-transferring) activity
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Anthoceros agrestis | Sc2ySwM_117 | 3 | CH_aag_159 | 2 | 2 | 0.000481541 |
Coffea canephora | chr2 | 3 | CH_ccan_51 | 3 | 8 | 0.0000000015236 |
Davidia involucrata | GWHABJS00000004 | 3 | CH_din_277 | 2 | 2 | 0.000150038 |
Durio zibethinus | NW_019167926.1 | 3 | CH_dzi_240 | 2 | 2 | 0.000139047 |
Fragaria x ananassa | Fvb7-2 | 3 | CH_fan_230 | 3 | 7 | 0.00000296516 |
Fragaria x ananassa | Fvb7-4 | 3 | CH_fan_263 | 3 | 9 | 0.00000711546 |
Fragaria vesca | Fvb7 | 3 | CH_fve_28 | 6 | 22 | 0.00000000000000119089 |
Gossypium hirsutum | A05 | 3 | CH_ghi_575 | 2 | 2 | 0.000400523 |
Gossypium hirsutum | D04 | 3 | CH_ghi_576 | 2 | 2 | 0.000400523 |
Gossypium raimondii | Chr12 | 3 | CH_gra_254 | 2 | 2 | 0.000160832 |
Lupinus albus | Lalb_Chr10 | 3 | CH_lal_326 | 2 | 2 | 0.000314895 |
Malus domestica | Chr07 | 3 | CH_mdo_705 | 2 | 2 | 0.000796344 |
Malus domestica | Chr02 | 3 | CH_mdo_83 | 4 | 4 | 0.0000000000057261 |
Manihot esculenta | Chromosome10 | 3 | CH_mes_319 | 2 | 2 | 0.000183189 |
Prunus persica | Pp02 | 3 | CH_ppe_326 | 2 | 2 | 0.0000745962 |
Simmondsia chinensis | GWHAASQ00000020 | 3 | CH_sci_216 | 2 | 2 | 0.000255428 |
Sequoiadendron giganteum | chr4 | 3 | CH_sgi_1257 | 2 | 3 | 0.000438418 |
Trochodendron aralioides | group7 | 3 | CH_tar_489 | 2 | 2 | 0.000900549 |
Theobroma cacao | Chromosome_10 | 3 | CH_tca_276 | 2 | 2 | 0.0000732386 |
Vanilla planifolia | CM028155.1 | 3 | CH_vpl_267 | 2 | 2 | 0.000221664 |
Anthoceros agrestis | Sc2ySwM_117 | 4 | CH_aag_159 | 2 | 2 | 0.000481541 |
Coffea canephora | chr2 | 4 | CH_ccan_51 | 3 | 8 | 0.0000000015236 |
Davidia involucrata | GWHABJS00000004 | 4 | CH_din_277 | 2 | 2 | 0.000150038 |
Durio zibethinus | NW_019167926.1 | 4 | CH_dzi_240 | 2 | 2 | 0.000139047 |
Fragaria x ananassa | Fvb7-2 | 4 | CH_fan_230 | 3 | 7 | 0.00000296516 |
Fragaria x ananassa | Fvb7-4 | 4 | CH_fan_263 | 3 | 9 | 0.00000711546 |
Fragaria vesca | Fvb7 | 4 | CH_fve_28 | 6 | 22 | 0.00000000000000119089 |
Gossypium hirsutum | A05 | 4 | CH_ghi_575 | 2 | 2 | 0.000400523 |
Gossypium hirsutum | D04 | 4 | CH_ghi_576 | 2 | 2 | 0.000400523 |
Gossypium raimondii | Chr12 | 4 | CH_gra_254 | 2 | 2 | 0.000160832 |
Lupinus albus | Lalb_Chr10 | 4 | CH_lal_326 | 2 | 2 | 0.000314895 |
Malus domestica | Chr07 | 4 | CH_mdo_705 | 2 | 2 | 0.000796344 |
Malus domestica | Chr02 | 4 | CH_mdo_83 | 4 | 4 | 0.0000000000057261 |
Manihot esculenta | Chromosome10 | 4 | CH_mes_319 | 2 | 2 | 0.000183189 |
Prunus persica | Pp02 | 4 | CH_ppe_326 | 2 | 2 | 0.0000745962 |
Simmondsia chinensis | GWHAASQ00000020 | 4 | CH_sci_216 | 2 | 2 | 0.000255428 |
Sequoiadendron giganteum | chr4 | 4 | CH_sgi_1257 | 2 | 3 | 0.000438418 |
Trochodendron aralioides | group7 | 4 | CH_tar_489 | 2 | 2 | 0.000900549 |
Theobroma cacao | Chromosome_10 | 4 | CH_tca_276 | 2 | 2 | 0.0000732386 |
Vanilla planifolia | CM028155.1 | 4 | CH_vpl_267 | 2 | 2 | 0.000221664 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |