Functional clusters

Information

  • Type Gene Ontology
  • Description phosphatidylinositol phospholipase C activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr3 3 CH_acertr_26 5 6 0.0000000000000233435
Arabidopsis lyrata scaffold_8 3 CH_aly_125 3 4 0.00000146363
Aquilegia oxysepala CHR04 3 CH_aox_259 2 2 0.000481193
Aquilegia oxysepala CHR02 3 CH_aox_260 2 2 0.000481193
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.20 3 CH_arhy_321 3 3 0.000000752906
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.07 3 CH_arhy_373 3 4 0.00000301114
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.10 3 CH_arhy_397 3 5 0.00000752664
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.17 3 CH_arhy_440 3 7 0.0000263348
Amborella trichopoda AmTr_v1.0_scaffold00007 3 CH_atr_190 2 2 0.0000794407
Brassica carinata ChrC04 3 CH_bca_315 3 3 0.00000105557
Brassica napus A10 3 CH_bna_326 3 4 0.0000083913
Brassica napus C09 3 CH_bna_378 3 5 0.0000209741
Brassica oleracea C9 3 CH_bol_100 4 10 0.0000000400012
Brassica rapa A10 3 CH_bra_129 3 4 0.00000503069
Beta vulgaris Chr7_EL10_PGA_scaffold5 3 CH_bvu_84 3 3 0.000000102821
Camellia sinensis var. sinensis Chr11 3 CH_camsi_173 4 10 0.00000000424981
Cannabis sativa NC_044375.1 3 CH_cansat_301 2 2 0.000393985
Cicer arietinum L. Ca_LG2_v3 3 CH_car_36 3 3 0.000000181733
Corylus avellana 11 3 CH_cav_368 2 2 0.000460017
Coffea canephora chr2 3 CH_ccan_307 2 7 0.000255531
Citrus clementina scaffold_8 3 CH_ccl_181 3 3 0.000000201881
Carpinus fangiana Cfa04 3 CH_cfa_301 2 2 0.000454408
Cardamine hirsuta Chr8 3 CH_chi_141 3 4 0.0000010032
Carya illinoinensis Chr02 3 CH_cil_517 2 2 0.000929742
Carya illinoinensis Chr01 3 CH_cil_518 2 2 0.000929742
Cucumis melo chr12 3 CH_cme_233 2 2 0.000400267
Corchorus olitorius AWUE01019121.1 3 CH_col_69 2 2 0.000292099
Chenopodium quinoa C_Quinoa_Scaffold_2716 3 CH_cqu_190 3 3 0.00000074089
Chenopodium quinoa C_Quinoa_Scaffold_2465 3 CH_cqu_99 4 5 0.00000000078976
Capsella rubella scaffold_8 3 CH_cru_154 3 4 0.00000179597
Cucumis sativus L. chr1 3 CH_csa_250 2 2 0.000500856
Davidia involucrata GWHABJS00000007 3 CH_din_145 3 4 0.000000840341
Durio zibethinus NW_019168159.1 3 CH_dzi_124 3 4 0.000000721738
Erigeron canadensis Conyza_canadensis_scaffold:9 3 CH_eca_214 3 7 0.0000126783
Eucalyptus grandis Chr10 3 CH_egr_468 3 3 0.000000287747
Eucalyptus grandis Chr10 3 CH_egr_519 3 4 0.00000115083
Eutrema salsugineum scaffold_2 3 CH_esa_88 3 3 0.000000487118
Fragaria x ananassa Fvb3-2 3 CH_fan_234 3 6 0.0000037379
Fragaria vesca Fvb3 3 CH_fve_149 3 5 0.0000005205
Fragaria vesca Fvb7 3 CH_fve_358 2 2 0.000589102
Gossypium hirsutum A05 3 CH_ghi_155 4 5 0.000000000873714
Gossypium hirsutum D05 3 CH_ghi_170 4 6 0.00000000262071
Glycine max Gm11 3 CH_gma_199 3 3 0.000000983252
Glycine max Gm18 3 CH_gma_200 3 3 0.000000983252
Glycine max Gm02 3 CH_gma_201 3 3 0.000000983252
Glycine max Gm14 3 CH_gma_91 4 5 0.00000000111944
Gossypium raimondii Chr09 3 CH_gra_85 4 6 0.000000000873485
Lotus japonicus Contig00357 3 CH_lja_129 3 3 0.000000920437
Lotus japonicus chr6 3 CH_lja_196 3 7 0.0000321865
Lonicera japonica GWHAAZE00000001 3 CH_lonja_542 2 2 0.000598874
Malus domestica Chr01 3 CH_mdo_696 2 2 0.000796344
Malus domestica Chr03 3 CH_mdo_697 2 2 0.000796344
Malus domestica Chr07 3 CH_mdo_698 2 2 0.000796344
Manihot esculenta Chromosome02 3 CH_mes_169 3 3 0.000000195763
Medicago truncatula chr5 3 CH_mtr_344 3 4 0.000000850717
Medicago truncatula chr3 3 CH_mtr_414 3 7 0.00000744125
Olea europaea chr11 3 CH_oeu_270 2 2 0.000320273
Prunus persica Pp06 3 CH_ppe_189 3 3 0.0000000834721
Prunus persica Pp02 3 CH_ppe_463 2 2 0.000745962
Pisum sativum chr2LG1 3 CH_psa_209 3 13 0.0000408147
Papaver somniferum NW_020628818.1 3 CH_pso_125 4 5 0.0000000000849028
Papaver somniferum NC_039366.1 3 CH_pso_142 4 6 0.000000000254687
Phaseolus vulgaris Chr01 3 CH_pvu_129 3 3 0.000000283418
Phaseolus vulgaris Chr08 3 CH_pvu_130 3 3 0.000000283418
Quercus lobata 8 3 CH_qlo_1030 2 3 0.000929264
Quercus lobata 1 3 CH_qlo_887 2 2 0.000309773
Rosa chinensis RcHm_v2.0_Chr5 3 CH_rch_445 3 17 0.0000161992
Striga asiatica scaffold60 3 CH_sas_106 2 2 0.000625371
Salvia bowleyana GWHASIU00000002 3 CH_sbo_182 3 3 0.000000108681
Salix brachista GWHAAZH00000016 3 CH_sbr_375 2 2 0.000945209
Salix brachista GWHAAZH00000010 3 CH_sbr_376 2 2 0.000945209
Schrenkiella parvula ch6-6 3 CH_spa_57 3 3 0.00000052074
Solanum pennellii Spenn-ch06 3 CH_spe_471 2 2 0.00093406
Solanum tuberosum ST4.03ch06 3 CH_stu_616 2 2 0.000768679
Trochodendron aralioides group2 3 CH_tar_438 2 2 0.000600366
Theobroma cacao Chromosome_9 3 CH_tca_170 3 4 0.000000321816
Trifolium pratense Tp57577_TGAC_v2_LG5 3 CH_tpr_91 3 3 0.000000171909
Vigna mungo CM024073.1 3 CH_vmu_89 3 3 0.000000219194
Vigna mungo CM024070.1 3 CH_vmu_90 3 3 0.000000219194
Vitis vinifera chr6 3 CH_vvi_161 3 3 0.000000303754
Acer truncatum chr3 4 CH_acertr_26 5 6 0.0000000000000233435
Arabidopsis lyrata scaffold_8 4 CH_aly_125 3 4 0.00000146363
Aquilegia oxysepala CHR04 4 CH_aox_259 2 2 0.000481193
Aquilegia oxysepala CHR02 4 CH_aox_260 2 2 0.000481193
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.20 4 CH_arhy_321 3 3 0.000000752906
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.07 4 CH_arhy_373 3 4 0.00000301114
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.10 4 CH_arhy_397 3 5 0.00000752664
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.17 4 CH_arhy_440 3 7 0.0000263348
Amborella trichopoda AmTr_v1.0_scaffold00007 4 CH_atr_190 2 2 0.0000794407
Brassica carinata ChrC04 4 CH_bca_315 3 3 0.00000105557
Brassica napus A10 4 CH_bna_326 3 4 0.0000083913
Brassica napus C09 4 CH_bna_378 3 5 0.0000209741
Brassica oleracea C9 4 CH_bol_100 4 10 0.0000000400012
Brassica rapa A10 4 CH_bra_129 3 4 0.00000503069
Beta vulgaris Chr7_EL10_PGA_scaffold5 4 CH_bvu_84 3 3 0.000000102821
Camellia sinensis var. sinensis Chr11 4 CH_camsi_173 4 10 0.00000000424981
Cannabis sativa NC_044375.1 4 CH_cansat_301 2 2 0.000393985
Cicer arietinum L. Ca_LG2_v3 4 CH_car_36 3 3 0.000000181733
Corylus avellana 11 4 CH_cav_368 2 2 0.000460017
Coffea canephora chr2 4 CH_ccan_307 2 7 0.000255531
Citrus clementina scaffold_8 4 CH_ccl_181 3 3 0.000000201881
Carpinus fangiana Cfa04 4 CH_cfa_301 2 2 0.000454408
Cardamine hirsuta Chr8 4 CH_chi_141 3 4 0.0000010032
Carya illinoinensis Chr02 4 CH_cil_517 2 2 0.000929742
Carya illinoinensis Chr01 4 CH_cil_518 2 2 0.000929742
Cucumis melo chr12 4 CH_cme_233 2 2 0.000400267
Corchorus olitorius AWUE01019121.1 4 CH_col_69 2 2 0.000292099
Chenopodium quinoa C_Quinoa_Scaffold_2716 4 CH_cqu_190 3 3 0.00000074089
Chenopodium quinoa C_Quinoa_Scaffold_2465 4 CH_cqu_99 4 5 0.00000000078976
Capsella rubella scaffold_8 4 CH_cru_154 3 4 0.00000179597
Cucumis sativus L. chr1 4 CH_csa_250 2 2 0.000500856
Davidia involucrata GWHABJS00000007 4 CH_din_145 3 4 0.000000840341
Durio zibethinus NW_019168159.1 4 CH_dzi_124 3 4 0.000000721738
Erigeron canadensis Conyza_canadensis_scaffold:9 4 CH_eca_214 3 7 0.0000126783
Eucalyptus grandis Chr10 4 CH_egr_468 3 3 0.000000287747
Eucalyptus grandis Chr10 4 CH_egr_519 3 4 0.00000115083
Eutrema salsugineum scaffold_2 4 CH_esa_88 3 3 0.000000487118
Fragaria x ananassa Fvb3-2 4 CH_fan_234 3 6 0.0000037379
Fragaria vesca Fvb3 4 CH_fve_149 3 5 0.0000005205
Fragaria vesca Fvb7 4 CH_fve_358 2 2 0.000589102
Gossypium hirsutum A05 4 CH_ghi_155 4 5 0.000000000873714
Gossypium hirsutum D05 4 CH_ghi_170 4 6 0.00000000262071
Glycine max Gm11 4 CH_gma_199 3 3 0.000000983252
Glycine max Gm18 4 CH_gma_200 3 3 0.000000983252
Glycine max Gm02 4 CH_gma_201 3 3 0.000000983252
Glycine max Gm14 4 CH_gma_91 4 5 0.00000000111944
Gossypium raimondii Chr09 4 CH_gra_85 4 6 0.000000000873485
Lotus japonicus Contig00357 4 CH_lja_129 3 3 0.000000920437
Lotus japonicus chr6 4 CH_lja_196 3 7 0.0000321865
Lonicera japonica GWHAAZE00000001 4 CH_lonja_542 2 2 0.000598874
Malus domestica Chr01 4 CH_mdo_696 2 2 0.000796344
Malus domestica Chr03 4 CH_mdo_697 2 2 0.000796344
Malus domestica Chr07 4 CH_mdo_698 2 2 0.000796344
Manihot esculenta Chromosome02 4 CH_mes_169 3 3 0.000000195763
Medicago truncatula chr5 4 CH_mtr_344 3 4 0.000000850717
Medicago truncatula chr3 4 CH_mtr_414 3 7 0.00000744125
Olea europaea chr11 4 CH_oeu_270 2 2 0.000320273
Prunus persica Pp06 4 CH_ppe_189 3 3 0.0000000834721
Prunus persica Pp02 4 CH_ppe_463 2 2 0.000745962
Pisum sativum chr2LG1 4 CH_psa_209 3 13 0.0000408147
Papaver somniferum NW_020628818.1 4 CH_pso_125 4 5 0.0000000000849028
Papaver somniferum NC_039366.1 4 CH_pso_142 4 6 0.000000000254687
Phaseolus vulgaris Chr01 4 CH_pvu_129 3 3 0.000000283418
Phaseolus vulgaris Chr08 4 CH_pvu_130 3 3 0.000000283418
Quercus lobata 8 4 CH_qlo_1030 2 3 0.000929264
Quercus lobata 1 4 CH_qlo_887 2 2 0.000309773
Rosa chinensis RcHm_v2.0_Chr5 4 CH_rch_445 3 17 0.0000161992
Striga asiatica scaffold60 4 CH_sas_106 2 2 0.000625371
Salvia bowleyana GWHASIU00000002 4 CH_sbo_182 3 3 0.000000108681
Salix brachista GWHAAZH00000016 4 CH_sbr_375 2 2 0.000945209
Salix brachista GWHAAZH00000010 4 CH_sbr_376 2 2 0.000945209
Schrenkiella parvula ch6-6 4 CH_spa_57 3 3 0.00000052074
Solanum pennellii Spenn-ch06 4 CH_spe_471 2 2 0.00093406
Solanum tuberosum ST4.03ch06 4 CH_stu_616 2 2 0.000768679
Trochodendron aralioides group2 4 CH_tar_438 2 2 0.000600366
Theobroma cacao Chromosome_9 4 CH_tca_170 3 4 0.000000321816
Trifolium pratense Tp57577_TGAC_v2_LG5 4 CH_tpr_91 3 3 0.000000171909
Vigna mungo CM024073.1 4 CH_vmu_89 3 3 0.000000219194
Vigna mungo CM024070.1 4 CH_vmu_90 3 3 0.000000219194
Vitis vinifera chr6 4 CH_vvi_161 3 3 0.000000303754

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001