Functional clusters
Information
- Type Gene Ontology
- Description hydroxymethylglutaryl-CoA reductase (NADPH) activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica carinata | ChrC06 | 3 | CH_bca_29 | 5 | 6 | 0.00000000000000434105 |
| Brassica napus | C02 | 3 | CH_bna_553 | 3 | 5 | 0.000334678 |
| Daucus carota | DCARv2_Chr5 | 3 | CH_dca_363 | 2 | 3 | 0.000573967 |
| Eucalyptus grandis | Chr07 | 3 | CH_egr_470 | 3 | 3 | 0.000000287747 |
| Fragaria x ananassa | Fvb2-1 | 3 | CH_fan_109 | 4 | 7 | 0.00000000994003 |
| Fragaria x ananassa | Fvb2-4 | 3 | CH_fan_36 | 5 | 8 | 0.00000000000323721 |
| Fragaria x ananassa | Fvb2-2 | 3 | CH_fan_88 | 4 | 5 | 0.00000000142049 |
| Fragaria vesca | Fvb2 | 3 | CH_fve_17 | 6 | 7 | 3.12956e-18 |
| Gossypium hirsutum | A03 | 3 | CH_ghi_137 | 4 | 4 | 0.000000000174771 |
| Gossypium hirsutum | D02 | 3 | CH_ghi_138 | 4 | 4 | 0.000000000174771 |
| Gossypium raimondii | Chr05 | 3 | CH_gra_70 | 4 | 4 | 0.000000000058248 |
| Helianthus annuus | HanXRQChr17 | 3 | CH_han_713 | 2 | 2 | 0.0008115 |
| Lactuca sativa | Lsat_1_v8_lg_8 | 3 | CH_lsa_204 | 3 | 3 | 0.000000332904 |
| Medicago truncatula | chr5 | 3 | CH_mtr_76 | 5 | 6 | 0.000000000000016158 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 3 | CH_rch_41 | 8 | 26 | 1.01191e-19 |
| Sequoiadendron giganteum | chr6 | 3 | CH_sgi_85 | 7 | 7 | 8.42331e-24 |
| Solanum pennellii | Spenn-ch03 | 3 | CH_spe_418 | 2 | 2 | 0.00044479 |
| Trifolium pratense | Tp57577_TGAC_v2_LG3 | 3 | CH_tpr_119 | 3 | 3 | 0.000001891 |
| Brassica carinata | ChrC06 | 4 | CH_bca_29 | 5 | 6 | 0.00000000000000434105 |
| Brassica napus | C02 | 4 | CH_bna_553 | 3 | 5 | 0.000334678 |
| Daucus carota | DCARv2_Chr5 | 4 | CH_dca_363 | 2 | 3 | 0.000573967 |
| Eucalyptus grandis | Chr07 | 4 | CH_egr_470 | 3 | 3 | 0.000000287747 |
| Fragaria x ananassa | Fvb2-1 | 4 | CH_fan_109 | 4 | 7 | 0.00000000994003 |
| Fragaria x ananassa | Fvb2-4 | 4 | CH_fan_36 | 5 | 8 | 0.00000000000323721 |
| Fragaria x ananassa | Fvb2-2 | 4 | CH_fan_88 | 4 | 5 | 0.00000000142049 |
| Fragaria vesca | Fvb2 | 4 | CH_fve_17 | 6 | 7 | 3.12956e-18 |
| Gossypium hirsutum | A03 | 4 | CH_ghi_137 | 4 | 4 | 0.000000000174771 |
| Gossypium hirsutum | D02 | 4 | CH_ghi_138 | 4 | 4 | 0.000000000174771 |
| Gossypium raimondii | Chr05 | 4 | CH_gra_70 | 4 | 4 | 0.000000000058248 |
| Helianthus annuus | HanXRQChr17 | 4 | CH_han_713 | 2 | 2 | 0.0008115 |
| Lactuca sativa | Lsat_1_v8_lg_8 | 4 | CH_lsa_204 | 3 | 3 | 0.000000332904 |
| Medicago truncatula | chr5 | 4 | CH_mtr_76 | 5 | 6 | 0.000000000000016158 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 4 | CH_rch_41 | 8 | 26 | 1.01191e-19 |
| Sequoiadendron giganteum | chr6 | 4 | CH_sgi_85 | 7 | 7 | 8.42331e-24 |
| Solanum pennellii | Spenn-ch03 | 4 | CH_spe_418 | 2 | 2 | 0.00044479 |
| Trifolium pratense | Tp57577_TGAC_v2_LG3 | 4 | CH_tpr_119 | 3 | 3 | 0.000001891 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |