Functional clusters

Information

  • Type Gene Ontology
  • Description homoserine dehydrogenase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr13 3 CH_acertr_445 2 2 0.000422982
Actinidia chinensis Lachesis_group6 3 CH_ach_230 2 2 0.000543213
Avicennia marina ScioBoG_102833_HRSCAF_103052 3 CH_ama_109 2 2 0.000517331
Amaranthus hybridus AmaHy_arrow1_Scaffold_8 3 CH_amhyb_147 2 2 0.000252525
Brassica carinata ChrC09 3 CH_bca_328 3 6 0.00000115133
Fragaria x ananassa Fvb3-1 3 CH_fan_480 2 2 0.000518101
Glycine max Gm18 3 CH_gma_473 2 2 0.000569336
Lactuca sativa Lsat_1_v8_lg_4 3 CH_lsa_189 3 3 0.00000013871
Magnolia biondii Chr04 3 CH_mbi_603 2 2 0.000485661
Marchantia polymorpha scaffold_16 3 CH_mpo_84 2 2 0.000110442
Petunia axillaris Peaxi162Scf00078 3 CH_pax_97 3 4 0.000000593943
Sapria himalayana scaffold4_21100006 3 CH_shi_24 4 6 0.0000000000420647
Solanum lycopersicum SL4.0ch11 3 CH_sly_488 2 2 0.000352164
Tarenaya hassleriana NW_010965372.1 3 CH_tha_156 2 2 0.000419082
Vigna mungo CM024069.1 3 CH_vmu_81 3 3 0.0000000626267
Vanilla planifolia CM028160.1 3 CH_vpl_310 2 2 0.000443328
Acer truncatum chr13 4 CH_acertr_445 2 2 0.000422982
Actinidia chinensis Lachesis_group6 4 CH_ach_230 2 2 0.000543213
Avicennia marina ScioBoG_102833_HRSCAF_103052 4 CH_ama_109 2 2 0.000517331
Amaranthus hybridus AmaHy_arrow1_Scaffold_8 4 CH_amhyb_147 2 2 0.000252525
Brassica carinata ChrC09 4 CH_bca_328 3 6 0.00000115133
Fragaria x ananassa Fvb3-1 4 CH_fan_480 2 2 0.000518101
Glycine max Gm18 4 CH_gma_473 2 2 0.000569336
Lactuca sativa Lsat_1_v8_lg_4 4 CH_lsa_189 3 3 0.00000013871
Magnolia biondii Chr04 4 CH_mbi_603 2 2 0.000485661
Marchantia polymorpha scaffold_16 4 CH_mpo_84 2 2 0.000110442
Petunia axillaris Peaxi162Scf00078 4 CH_pax_97 3 4 0.000000593943
Sapria himalayana scaffold4_21100006 4 CH_shi_24 4 6 0.0000000000420647
Solanum lycopersicum SL4.0ch11 4 CH_sly_488 2 2 0.000352164
Tarenaya hassleriana NW_010965372.1 4 CH_tha_156 2 2 0.000419082
Vigna mungo CM024069.1 4 CH_vmu_81 3 3 0.0000000626267
Vanilla planifolia CM028160.1 4 CH_vpl_310 2 2 0.000443328

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001