Functional clusters

Information

  • Type Gene Ontology
  • Description glutamate-cysteine ligase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr9 3 CH_acertr_130 3 5 0.0000000745448
Actinidia chinensis Lachesis_group6 3 CH_ach_121 2 2 0.0000543213
Amborella trichopoda AmTr_v1.0_scaffold00041 3 CH_atr_253 2 3 0.000238322
Brassica carinata Contig1132 3 CH_bca_881 2 2 0.00059854
Brassica napus A03 3 CH_bna_609 2 2 0.000519726
Brassica oleracea C7 3 CH_bol_151 3 6 0.000000640939
Brassica rapa A03 3 CH_bra_236 2 2 0.000257588
Ceratophyllum demersum 9 3 CH_cde_146 2 2 0.000236939
Daucus carota DCARv2_Chr1 3 CH_dca_283 2 3 0.000191327
Durio zibethinus NW_019167838.1 3 CH_dzi_247 2 2 0.000139047
Glycine max Gm11 3 CH_gma_480 2 2 0.000569336
Lupinus albus Lalb_Chr09 3 CH_lal_333 2 2 0.000314895
Lactuca sativa Lsat_1_v8_lg_8 3 CH_lsa_488 2 2 0.00077101
Medicago truncatula chr5 3 CH_mtr_236 3 3 0.0000000101287
Quercus lobata 7 3 CH_qlo_1033 2 3 0.000929264
Rhododendron simsii chr02 3 CH_rsi_154 3 3 0.00000000624652
Sequoiadendron giganteum chr8 3 CH_sgi_468 3 3 0.00000000355983
Trochodendron aralioides group1 3 CH_tar_348 2 2 0.00018011
Tripterygium wilfordii NC_052251.1 3 CH_twi_102 3 4 0.0000000746937
Acer truncatum chr9 4 CH_acertr_130 3 5 0.0000000745448
Actinidia chinensis Lachesis_group6 4 CH_ach_121 2 2 0.0000543213
Amborella trichopoda AmTr_v1.0_scaffold00041 4 CH_atr_253 2 3 0.000238322
Brassica carinata Contig1132 4 CH_bca_881 2 2 0.00059854
Brassica napus A03 4 CH_bna_609 2 2 0.000519726
Brassica oleracea C7 4 CH_bol_151 3 6 0.000000640939
Brassica rapa A03 4 CH_bra_236 2 2 0.000257588
Ceratophyllum demersum 9 4 CH_cde_146 2 2 0.000236939
Daucus carota DCARv2_Chr1 4 CH_dca_283 2 3 0.000191327
Durio zibethinus NW_019167838.1 4 CH_dzi_247 2 2 0.000139047
Glycine max Gm11 4 CH_gma_480 2 2 0.000569336
Lupinus albus Lalb_Chr09 4 CH_lal_333 2 2 0.000314895
Lactuca sativa Lsat_1_v8_lg_8 4 CH_lsa_488 2 2 0.00077101
Medicago truncatula chr5 4 CH_mtr_236 3 3 0.0000000101287
Quercus lobata 7 4 CH_qlo_1033 2 3 0.000929264
Rhododendron simsii chr02 4 CH_rsi_154 3 3 0.00000000624652
Sequoiadendron giganteum chr8 4 CH_sgi_468 3 3 0.00000000355983
Trochodendron aralioides group1 4 CH_tar_348 2 2 0.00018011
Tripterygium wilfordii NC_052251.1 4 CH_twi_102 3 4 0.0000000746937

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001