Functional clusters
Information
- Type Gene Ontology
- Description 4-alpha-glucanotransferase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Capsicum annuum | PGAv.1.6.scaffold39 | 3 | CH_can_128 | 3 | 3 | 0.0000000102372 |
| Hydrangea macrophylla | Hma1.2p1_0375F.1 | 3 | CH_hma_57 | 3 | 3 | 0.0000000740453 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 3 | CH_lsa_514 | 2 | 3 | 0.000925157 |
| Nicotiana tabacum | Nitab4.5_0000092 | 3 | CH_nta_119 | 2 | 2 | 0.000329182 |
| Quercus lobata | 1 | 3 | CH_qlo_446 | 3 | 4 | 0.000000159926 |
| Rhododendron simsii | ctg64 | 3 | CH_rsi_248 | 3 | 6 | 0.000001249 |
| Sequoiadendron giganteum | chr2 | 3 | CH_sgi_411 | 4 | 5 | 0.000000000364144 |
| Solanum pennellii | Spenn-ch02 | 3 | CH_spe_328 | 3 | 30 | 0.000120306 |
| Vaccinium macrocarpon | chr11_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_398 | 2 | 2 | 0.000929238 |
| Capsicum annuum | PGAv.1.6.scaffold39 | 4 | CH_can_128 | 3 | 3 | 0.0000000102372 |
| Hydrangea macrophylla | Hma1.2p1_0375F.1 | 4 | CH_hma_57 | 3 | 3 | 0.0000000740453 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 4 | CH_lsa_514 | 2 | 3 | 0.000925157 |
| Nicotiana tabacum | Nitab4.5_0000092 | 4 | CH_nta_119 | 2 | 2 | 0.000329182 |
| Quercus lobata | 1 | 4 | CH_qlo_446 | 3 | 4 | 0.000000159926 |
| Rhododendron simsii | ctg64 | 4 | CH_rsi_248 | 3 | 6 | 0.000001249 |
| Sequoiadendron giganteum | chr2 | 4 | CH_sgi_411 | 4 | 5 | 0.000000000364144 |
| Solanum pennellii | Spenn-ch02 | 4 | CH_spe_328 | 3 | 30 | 0.000120306 |
| Vaccinium macrocarpon | chr11_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_398 | 2 | 2 | 0.000929238 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |