Functional clusters
Information
- Type Gene Ontology
- Description catalase activity
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Acer truncatum | chr13 | 3 | CH_acertr_110 | 3 | 4 | 0.000000029819 |
Actinidia chinensis | Lachesis_group26 | 3 | CH_ach_59 | 3 | 3 | 0.000000531158 |
Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.08 | 3 | CH_arhy_531 | 2 | 2 | 0.00017963 |
Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.17 | 3 | CH_arhy_644 | 2 | 3 | 0.000538871 |
Camellia sinensis var. sinensis | Chr11 | 3 | CH_camsi_616 | 3 | 18 | 0.000143892 |
Capsicum annuum | PGAv.1.6.scaffold208 | 3 | CH_can_161 | 3 | 3 | 0.000000102372 |
Cardamine hirsuta | Chr1 | 3 | CH_chi_295 | 2 | 2 | 0.000207361 |
Capsella rubella | scaffold_1 | 3 | CH_cru_275 | 2 | 2 | 0.000219346 |
Eutrema salsugineum | scaffold_5 | 3 | CH_esa_204 | 2 | 2 | 0.00022845 |
Manihot esculenta | Chromosome05 | 3 | CH_mes_431 | 2 | 2 | 0.000915947 |
Manihot esculenta | Chromosome18 | 3 | CH_mes_432 | 2 | 2 | 0.000915947 |
Quercus lobata | CM012294 | 3 | CH_qlo_722 | 2 | 2 | 0.0000516289 |
Solanum lycopersicum | SL4.0ch01 | 3 | CH_sly_585 | 2 | 2 | 0.000880411 |
Selaginella moellendorffii | scaffold_2 | 3 | CH_smo_70 | 3 | 6 | 0.00000914929 |
Schrenkiella parvula | ch1-1 | 3 | CH_spa_166 | 2 | 2 | 0.000236202 |
Vanilla planifolia | CM028160.1 | 3 | CH_vpl_357 | 2 | 2 | 0.00073888 |
Vitis vinifera | chrUn | 3 | CH_vvi_420 | 2 | 2 | 0.00076063 |
Vitis vinifera | chr4 | 3 | CH_vvi_421 | 2 | 2 | 0.00076063 |
Zea mays | 1 | 3 | CH_zma_308 | 2 | 2 | 0.000511313 |
Acer truncatum | chr13 | 4 | CH_acertr_110 | 3 | 4 | 0.000000029819 |
Actinidia chinensis | Lachesis_group26 | 4 | CH_ach_59 | 3 | 3 | 0.000000531158 |
Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.08 | 4 | CH_arhy_531 | 2 | 2 | 0.00017963 |
Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.17 | 4 | CH_arhy_644 | 2 | 3 | 0.000538871 |
Camellia sinensis var. sinensis | Chr11 | 4 | CH_camsi_616 | 3 | 18 | 0.000143892 |
Capsicum annuum | PGAv.1.6.scaffold208 | 4 | CH_can_161 | 3 | 3 | 0.000000102372 |
Cardamine hirsuta | Chr1 | 4 | CH_chi_295 | 2 | 2 | 0.000207361 |
Capsella rubella | scaffold_1 | 4 | CH_cru_275 | 2 | 2 | 0.000219346 |
Eutrema salsugineum | scaffold_5 | 4 | CH_esa_204 | 2 | 2 | 0.00022845 |
Manihot esculenta | Chromosome05 | 4 | CH_mes_431 | 2 | 2 | 0.000915947 |
Manihot esculenta | Chromosome18 | 4 | CH_mes_432 | 2 | 2 | 0.000915947 |
Quercus lobata | CM012294 | 4 | CH_qlo_722 | 2 | 2 | 0.0000516289 |
Solanum lycopersicum | SL4.0ch01 | 4 | CH_sly_585 | 2 | 2 | 0.000880411 |
Selaginella moellendorffii | scaffold_2 | 4 | CH_smo_70 | 3 | 6 | 0.00000914929 |
Schrenkiella parvula | ch1-1 | 4 | CH_spa_166 | 2 | 2 | 0.000236202 |
Vanilla planifolia | CM028160.1 | 4 | CH_vpl_357 | 2 | 2 | 0.00073888 |
Vitis vinifera | chrUn | 4 | CH_vvi_420 | 2 | 2 | 0.00076063 |
Vitis vinifera | chr4 | 4 | CH_vvi_421 | 2 | 2 | 0.00076063 |
Zea mays | 1 | 4 | CH_zma_308 | 2 | 2 | 0.000511313 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |