Functional clusters

Information

  • Type Gene Ontology
  • Description carbonate dehydratase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_368 3 CH_aag_22 5 10 0.0000000000197444
Acer truncatum chr8 3 CH_acertr_14 8 9 5.77319e-19
Acer truncatum chr9 3 CH_acertr_156 4 5 0.00000027495
Acer truncatum chr8 3 CH_acertr_44 7 23 0.0000000000157166
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.13 3 CH_arhy_380 3 3 0.00000349564
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.03 3 CH_arhy_454 3 5 0.0000349373
Amborella trichopoda AmTr_v1.0_scaffold00157 3 CH_atr_27 6 7 4.60506e-16
Brassica carinata ChrC08 3 CH_bca_236 4 6 0.000000138894
Brassica carinata ChrB07 3 CH_bca_277 4 7 0.000000323944
Brassica carinata ChrC05 3 CH_bca_570 3 4 0.0000679776
Brassica napus C06 3 CH_bna_157 4 5 0.0000000259611
Brassica oleracea C6 3 CH_bol_249 3 5 0.0000416428
Brassica rapa A06 3 CH_bra_265 4 44 0.000474154
Beta vulgaris Chr7_EL10_PGA_scaffold5 3 CH_bvu_38 5 7 0.0000000000058589
Camellia sinensis var. sinensis Chr10 3 CH_camsi_26 8 11 2.39479e-20
Camellia sinensis var. sinensis Chr4 3 CH_camsi_544 3 5 0.0000724851
Cannabis sativa NC_044372.1 3 CH_cansat_23 7 10 3.81463e-17
Cannabis sativa NC_044372.1 3 CH_cansat_246 3 6 0.000125187
Corylus avellana 10 3 CH_cav_182 3 3 0.0000085443
Corylus avellana 9 3 CH_cav_297 3 6 0.000170631
Corylus avellana 6 3 CH_cav_54 5 6 0.0000000000180758
Chara braunii BFEA01000104 3 CH_cbr_21 5 19 0.00000000107536
Ceratophyllum demersum 5 3 CH_cde_70 3 3 0.00000636278
Carpinus fangiana Cfa07 3 CH_cfa_191 3 4 0.0000192649
Cardamine hirsuta Chr1 3 CH_chi_190 3 4 0.0000233822
Carya illinoinensis Chr13 3 CH_cil_124 5 6 0.0000000000436741
Cucumis melo chr04 3 CH_cme_58 4 4 0.00000000272572
Cucumis melo chr12 3 CH_cme_61 5 15 0.00000000380769
Carica papaya supercontig_182 3 CH_cpa_89 3 3 0.00000162684
Cucumis sativus L. chr1 3 CH_csa_54 5 7 0.0000000000654764
Cucumis sativus L. chr3 3 CH_csa_72 4 4 0.00000000534049
Daucus carota DCARv2_Chr3 3 CH_dca_228 3 6 0.0000554711
Davidia involucrata GWHABJS00000010 3 CH_din_207 3 4 0.0000171031
Eucalyptus grandis Chr01 3 CH_egr_68 9 14 6.55742e-23
Erythranthe guttata scaffold_10 3 CH_egut_111 4 4 0.00000000158109
Fragaria x ananassa Fvb6-2 3 CH_fan_269 4 15 0.00000881074
Fragaria x ananassa Fvb6-3 3 CH_fan_92 5 12 0.0000000024158
Fragaria vesca Fvb6 3 CH_fve_35 7 22 0.000000000000043297
Gossypium hirsutum A01 3 CH_ghi_367 3 3 0.0000141641
Helianthus annuus HanXRQChr01 3 CH_han_113 5 6 0.0000000000119128
Helianthus annuus HanXRQChr11 3 CH_han_122 6 19 0.0000000000248626
Helianthus annuus HanXRQChr04 3 CH_han_382 3 3 0.00000818478
Lotus japonicus chr5 3 CH_lja_148 3 3 0.00000219371
Lonicera japonica GWHAAZE00000001 3 CH_lonja_78 6 6 9.4081e-16
Lactuca sativa Lsat_1_v8_lg_1 3 CH_lsa_235 3 3 0.00000180323
Lactuca sativa Lsat_1_v8_lg_1 3 CH_lsa_264 3 4 0.00000721107
Magnolia biondii Chr17 3 CH_mbi_287 5 60 0.00000176245
Magnolia biondii Chr03 3 CH_mbi_66 5 6 0.00000000000214468
Malus domestica Chr12 3 CH_mdo_160 4 5 0.0000000103444
Malus domestica Chr10 3 CH_mdo_426 3 5 0.0000495795
Manihot esculenta Chromosome11 3 CH_mes_151 4 5 0.0000000302302
Marchantia polymorpha scaffold_12 3 CH_mpo_9 7 10 0.00000000000000419729
Medicago truncatula chr3 3 CH_mtr_406 3 4 0.0000068859
Medicago truncatula chr1 3 CH_mtr_407 3 4 0.0000068859
Olea europaea chr4 3 CH_oeu_194 3 8 0.000108758
Oryza sativa ssp. japonica chr08 3 CH_osa_238 3 4 0.00000936908
Punica granatum NC_045128.1 3 CH_pgr_183 3 3 0.00000241551
Physcomitrium patens Chr07 3 CH_ppa_1 8 10 3.37931e-20
Physcomitrium patens Chr26 3 CH_ppa_48 4 9 0.000000921658
Prunus persica Pp07 3 CH_ppe_90 5 5 0.00000000000199024
Pisum sativum chr6LG2 3 CH_psa_79 4 8 0.0000000406482
Quercus lobata 7 3 CH_qlo_198 6 12 0.00000000000134737
Quercus lobata 7 3 CH_qlo_66 8 9 2.99857e-21
Quercus lobata 1 3 CH_qlo_766 3 5 0.0000918805
Rosa chinensis RcHm_v2.0_Chr3 3 CH_rch_234 5 24 0.0000000162969
Rosa chinensis RcHm_v2.0_Chr2 3 CH_rch_407 4 20 0.00000548613
Rhododendron simsii chr04 3 CH_rsi_392 3 7 0.000178119
Rhododendron simsii chr03 3 CH_rsi_89 5 5 0.00000000000111453
Salix brachista GWHAAZH00000015 3 CH_sbr_25 6 6 0.00000000000000225734
Sechium edule LG11 3 CH_sed_64 4 4 0.00000000964697
Sequoiadendron giganteum chr10 3 CH_sgi_308 5 6 0.00000000000515612
Solanum lycopersicum SL4.0ch06 3 CH_sly_234 3 3 0.00000188102
Selaginella moellendorffii scaffold_45 3 CH_smo_98 3 3 0.0000428427
Selenicereus undatus Scaffold_19641 3 CH_sun_56 3 3 0.00000174248
Trochodendron aralioides group2 3 CH_tar_218 3 3 0.0000083264
Trochodendron aralioides group2 3 CH_tar_79 4 4 0.00000000474923
Theobroma cacao Chromosome_3 3 CH_tca_210 3 3 0.00000450584
Theobroma cacao Chromosome_5 3 CH_tca_287 3 6 0.0000900103
Vitis vinifera chr17 3 CH_vvi_198 3 3 0.00000394881
Anthoceros agrestis Sc2ySwM_368 4 CH_aag_22 5 10 0.0000000000197444
Acer truncatum chr8 4 CH_acertr_14 8 9 5.77319e-19
Acer truncatum chr9 4 CH_acertr_156 4 5 0.00000027495
Acer truncatum chr8 4 CH_acertr_44 7 23 0.0000000000157166
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.13 4 CH_arhy_380 3 3 0.00000349564
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.03 4 CH_arhy_454 3 5 0.0000349373
Amborella trichopoda AmTr_v1.0_scaffold00157 4 CH_atr_27 6 7 4.60506e-16
Brassica carinata ChrC08 4 CH_bca_236 4 6 0.000000138894
Brassica carinata ChrB07 4 CH_bca_277 4 7 0.000000323944
Brassica carinata ChrC05 4 CH_bca_570 3 4 0.0000679776
Brassica napus C06 4 CH_bna_157 4 5 0.0000000259611
Brassica oleracea C6 4 CH_bol_249 3 5 0.0000416428
Brassica rapa A06 4 CH_bra_265 4 44 0.000474154
Beta vulgaris Chr7_EL10_PGA_scaffold5 4 CH_bvu_38 5 7 0.0000000000058589
Camellia sinensis var. sinensis Chr10 4 CH_camsi_26 8 11 2.39479e-20
Camellia sinensis var. sinensis Chr4 4 CH_camsi_544 3 5 0.0000724851
Cannabis sativa NC_044372.1 4 CH_cansat_23 7 10 3.81463e-17
Cannabis sativa NC_044372.1 4 CH_cansat_246 3 6 0.000125187
Corylus avellana 10 4 CH_cav_182 3 3 0.0000085443
Corylus avellana 9 4 CH_cav_297 3 6 0.000170631
Corylus avellana 6 4 CH_cav_54 5 6 0.0000000000180758
Chara braunii BFEA01000104 4 CH_cbr_21 5 19 0.00000000107536
Ceratophyllum demersum 5 4 CH_cde_70 3 3 0.00000636278
Carpinus fangiana Cfa07 4 CH_cfa_191 3 4 0.0000192649
Cardamine hirsuta Chr1 4 CH_chi_190 3 4 0.0000233822
Carya illinoinensis Chr13 4 CH_cil_124 5 6 0.0000000000436741
Cucumis melo chr04 4 CH_cme_58 4 4 0.00000000272572
Cucumis melo chr12 4 CH_cme_61 5 15 0.00000000380769
Carica papaya supercontig_182 4 CH_cpa_89 3 3 0.00000162684
Cucumis sativus L. chr1 4 CH_csa_54 5 7 0.0000000000654764
Cucumis sativus L. chr3 4 CH_csa_72 4 4 0.00000000534049
Daucus carota DCARv2_Chr3 4 CH_dca_228 3 6 0.0000554711
Davidia involucrata GWHABJS00000010 4 CH_din_207 3 4 0.0000171031
Eucalyptus grandis Chr01 4 CH_egr_68 9 14 6.55742e-23
Erythranthe guttata scaffold_10 4 CH_egut_111 4 4 0.00000000158109
Fragaria x ananassa Fvb6-2 4 CH_fan_269 4 15 0.00000881074
Fragaria x ananassa Fvb6-3 4 CH_fan_92 5 12 0.0000000024158
Fragaria vesca Fvb6 4 CH_fve_35 7 22 0.000000000000043297
Gossypium hirsutum A01 4 CH_ghi_367 3 3 0.0000141641
Helianthus annuus HanXRQChr01 4 CH_han_113 5 6 0.0000000000119128
Helianthus annuus HanXRQChr11 4 CH_han_122 6 19 0.0000000000248626
Helianthus annuus HanXRQChr04 4 CH_han_382 3 3 0.00000818478
Lotus japonicus chr5 4 CH_lja_148 3 3 0.00000219371
Lonicera japonica GWHAAZE00000001 4 CH_lonja_78 6 6 9.4081e-16
Lactuca sativa Lsat_1_v8_lg_1 4 CH_lsa_235 3 3 0.00000180323
Lactuca sativa Lsat_1_v8_lg_1 4 CH_lsa_264 3 4 0.00000721107
Magnolia biondii Chr17 4 CH_mbi_287 5 60 0.00000176245
Magnolia biondii Chr03 4 CH_mbi_66 5 6 0.00000000000214468
Malus domestica Chr12 4 CH_mdo_160 4 5 0.0000000103444
Malus domestica Chr10 4 CH_mdo_426 3 5 0.0000495795
Manihot esculenta Chromosome11 4 CH_mes_151 4 5 0.0000000302302
Marchantia polymorpha scaffold_12 4 CH_mpo_9 7 10 0.00000000000000419729
Medicago truncatula chr3 4 CH_mtr_406 3 4 0.0000068859
Medicago truncatula chr1 4 CH_mtr_407 3 4 0.0000068859
Olea europaea chr4 4 CH_oeu_194 3 8 0.000108758
Oryza sativa ssp. japonica chr08 4 CH_osa_238 3 4 0.00000936908
Punica granatum NC_045128.1 4 CH_pgr_183 3 3 0.00000241551
Physcomitrium patens Chr07 4 CH_ppa_1 8 10 3.37931e-20
Physcomitrium patens Chr26 4 CH_ppa_48 4 9 0.000000921658
Prunus persica Pp07 4 CH_ppe_90 5 5 0.00000000000199024
Pisum sativum chr6LG2 4 CH_psa_79 4 8 0.0000000406482
Quercus lobata 7 4 CH_qlo_198 6 12 0.00000000000134737
Quercus lobata 7 4 CH_qlo_66 8 9 2.99857e-21
Quercus lobata 1 4 CH_qlo_766 3 5 0.0000918805
Rosa chinensis RcHm_v2.0_Chr3 4 CH_rch_234 5 24 0.0000000162969
Rosa chinensis RcHm_v2.0_Chr2 4 CH_rch_407 4 20 0.00000548613
Rhododendron simsii chr04 4 CH_rsi_392 3 7 0.000178119
Rhododendron simsii chr03 4 CH_rsi_89 5 5 0.00000000000111453
Salix brachista GWHAAZH00000015 4 CH_sbr_25 6 6 0.00000000000000225734
Sechium edule LG11 4 CH_sed_64 4 4 0.00000000964697
Sequoiadendron giganteum chr10 4 CH_sgi_308 5 6 0.00000000000515612
Solanum lycopersicum SL4.0ch06 4 CH_sly_234 3 3 0.00000188102
Selaginella moellendorffii scaffold_45 4 CH_smo_98 3 3 0.0000428427
Selenicereus undatus Scaffold_19641 4 CH_sun_56 3 3 0.00000174248
Trochodendron aralioides group2 4 CH_tar_218 3 3 0.0000083264
Trochodendron aralioides group2 4 CH_tar_79 4 4 0.00000000474923
Theobroma cacao Chromosome_3 4 CH_tca_210 3 3 0.00000450584
Theobroma cacao Chromosome_5 4 CH_tca_287 3 6 0.0000900103
Vitis vinifera chr17 4 CH_vvi_198 3 3 0.00000394881

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001