Functional clusters

Information

  • Type Gene Ontology
  • Description amidase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Camellia sinensis var. sinensis Chr6 3 CH_camsi_585 2 3 0.000137561
Citrus clementina scaffold_5 3 CH_ccl_313 2 2 0.0000820311
Carya illinoinensis Chr07 3 CH_cil_395 2 3 0.000185943
Cucumis melo chr02 3 CH_cme_175 2 2 0.0000667111
Capsella rubella scaffold_1 3 CH_cru_221 2 2 0.0000731154
Durio zibethinus NW_019168004.1 3 CH_dzi_75 4 15 0.00000000203785
Eucalyptus grandis Chr02 3 CH_egr_749 2 3 0.000175577
Gossypium hirsutum D11 3 CH_ghi_470 2 2 0.000160209
Gossypium hirsutum A11 3 CH_ghi_600 2 3 0.000480613
Gossypium raimondii Chr07 3 CH_gra_241 2 3 0.000160828
Malus domestica Chr12 3 CH_mdo_235 3 4 0.000000301966
Malus domestica Chr00 3 CH_mdo_708 2 2 0.000796344
Oryza sativa ssp. japonica chr04 3 CH_osa_290 2 2 0.0000528123
Punica granatum NC_045133.1 3 CH_pgr_120 3 4 0.0000000337821
Populus trichocarpa Chr13 3 CH_ptr_319 2 2 0.0000578001
Quercus lobata 3 3 CH_qlo_160 8 43 0.000000000000014684
Rosa chinensis RcHm_v2.0_Chr3 3 CH_rch_289 3 9 0.000000200224
Trochodendron aralioides group2 3 CH_tar_384 2 4 0.000360198
Theobroma cacao Chromosome_5 3 CH_tca_278 2 2 0.0000732386
Camellia sinensis var. sinensis Chr6 4 CH_camsi_585 2 3 0.000137561
Citrus clementina scaffold_5 4 CH_ccl_313 2 2 0.0000820311
Carya illinoinensis Chr07 4 CH_cil_395 2 3 0.000185943
Cucumis melo chr02 4 CH_cme_175 2 2 0.0000667111
Capsella rubella scaffold_1 4 CH_cru_221 2 2 0.0000731154
Durio zibethinus NW_019168004.1 4 CH_dzi_75 4 15 0.00000000203785
Eucalyptus grandis Chr02 4 CH_egr_749 2 3 0.000175577
Gossypium hirsutum D11 4 CH_ghi_470 2 2 0.000160209
Gossypium hirsutum A11 4 CH_ghi_600 2 3 0.000480613
Gossypium raimondii Chr07 4 CH_gra_241 2 3 0.000160828
Malus domestica Chr12 4 CH_mdo_235 3 4 0.000000301966
Malus domestica Chr00 4 CH_mdo_708 2 2 0.000796344
Oryza sativa ssp. japonica chr04 4 CH_osa_290 2 2 0.0000528123
Punica granatum NC_045133.1 4 CH_pgr_120 3 4 0.0000000337821
Populus trichocarpa Chr13 4 CH_ptr_319 2 2 0.0000578001
Quercus lobata 3 4 CH_qlo_160 8 43 0.000000000000014684
Rosa chinensis RcHm_v2.0_Chr3 4 CH_rch_289 3 9 0.000000200224
Trochodendron aralioides group2 4 CH_tar_384 2 4 0.000360198
Theobroma cacao Chromosome_5 4 CH_tca_278 2 2 0.0000732386

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001