Functional clusters

Information

  • Type Gene Ontology
  • Description DNA ligase (ATP) activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00064 3 CH_atr_101 3 3 0.000000189332
Brassica carinata ChrC08 3 CH_bca_394 3 7 0.0000052761
Cardamine hirsuta Chr8 3 CH_chi_134 3 3 0.000000401335
Citrullus lanatus CG_Chr07 3 CH_cla_173 2 2 0.000887115
Carica papaya supercontig_170 3 CH_cpa_29 4 6 0.00000000135294
Erigeron canadensis Conyza_canadensis_scaffold:3 3 CH_eca_156 3 7 0.00000105688
Fragaria vesca Fvb3 3 CH_fve_123 3 3 0.0000000520576
Lonicera japonica GWHAAZE00000002 3 CH_lonja_504 2 2 0.000359324
Malus domestica Chr11 3 CH_mdo_609 2 2 0.000379212
Nicotiana tabacum Nitab4.5_0000329 3 CH_nta_89 2 2 0.000109727
Phaseolus vulgaris Chr05 3 CH_pvu_368 2 2 0.000734727
Trochodendron aralioides group10 3 CH_tar_454 2 2 0.000600366
Vanilla planifolia CM028161.1 3 CH_vpl_128 4 47 0.00000322475
Amborella trichopoda AmTr_v1.0_scaffold00064 4 CH_atr_101 3 3 0.000000189332
Brassica carinata ChrC08 4 CH_bca_394 3 7 0.0000052761
Cardamine hirsuta Chr8 4 CH_chi_134 3 3 0.000000401335
Citrullus lanatus CG_Chr07 4 CH_cla_173 2 2 0.000887115
Carica papaya supercontig_170 4 CH_cpa_29 4 6 0.00000000135294
Erigeron canadensis Conyza_canadensis_scaffold:3 4 CH_eca_156 3 7 0.00000105688
Fragaria vesca Fvb3 4 CH_fve_123 3 3 0.0000000520576
Lonicera japonica GWHAAZE00000002 4 CH_lonja_504 2 2 0.000359324
Malus domestica Chr11 4 CH_mdo_609 2 2 0.000379212
Nicotiana tabacum Nitab4.5_0000329 4 CH_nta_89 2 2 0.000109727
Phaseolus vulgaris Chr05 4 CH_pvu_368 2 2 0.000734727
Trochodendron aralioides group10 4 CH_tar_454 2 2 0.000600366
Vanilla planifolia CM028161.1 4 CH_vpl_128 4 47 0.00000322475

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001