Functional clusters
Information
- Type Gene Ontology
- Description 3-isopropylmalate dehydrogenase activity
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Aethionema arabicum | LG-4 | 3 | CH_aar_205 | 2 | 2 | 0.000273698 |
Actinidia chinensis | Lachesis_group1 | 3 | CH_ach_173 | 2 | 2 | 0.000162964 |
Arabidopsis lyrata | scaffold_2 | 3 | CH_aly_285 | 2 | 2 | 0.000396027 |
Brassica carinata | ChrC03 | 3 | CH_bca_259 | 3 | 5 | 0.000000239882 |
Brassica carinata | ChrB05 | 3 | CH_bca_819 | 2 | 2 | 0.000448905 |
Brassica napus | A02 | 3 | CH_bna_206 | 3 | 4 | 0.000000248053 |
Brassica napus | C02 | 3 | CH_bna_207 | 3 | 4 | 0.000000248053 |
Brassica oleracea | C2 | 3 | CH_bol_95 | 3 | 3 | 0.0000000320521 |
Brassica rapa | A02 | 3 | CH_bra_76 | 3 | 4 | 0.000000110583 |
Cicer arietinum L. | Ca_LG1_v3 | 3 | CH_car_24 | 3 | 4 | 0.0000000363451 |
Capsella rubella | scaffold_2 | 3 | CH_cru_264 | 2 | 2 | 0.000219346 |
Erythranthe guttata | scaffold_9 | 3 | CH_egut_281 | 2 | 2 | 0.0000728147 |
Fragaria vesca | Fvb1 | 3 | CH_fve_346 | 2 | 3 | 0.000530165 |
Lupinus albus | Lalb_Chr22 | 3 | CH_lal_324 | 2 | 2 | 0.000314895 |
Rosa chinensis | RcHm_v2.0_Chr2 | 3 | CH_rch_684 | 2 | 5 | 0.000398629 |
Sequoiadendron giganteum | chr1 | 3 | CH_sgi_460 | 3 | 3 | 0.00000000355983 |
Schrenkiella parvula | ch5-7 | 3 | CH_spa_186 | 2 | 2 | 0.000472404 |
Trochodendron aralioides | group1 | 3 | CH_tar_430 | 2 | 3 | 0.000540303 |
Tarenaya hassleriana | NW_010965372.1 | 3 | CH_tha_130 | 2 | 2 | 0.000209541 |
Aethionema arabicum | LG-4 | 4 | CH_aar_205 | 2 | 2 | 0.000273698 |
Actinidia chinensis | Lachesis_group1 | 4 | CH_ach_173 | 2 | 2 | 0.000162964 |
Arabidopsis lyrata | scaffold_2 | 4 | CH_aly_285 | 2 | 2 | 0.000396027 |
Brassica carinata | ChrC03 | 4 | CH_bca_259 | 3 | 5 | 0.000000239882 |
Brassica carinata | ChrB05 | 4 | CH_bca_819 | 2 | 2 | 0.000448905 |
Brassica napus | A02 | 4 | CH_bna_206 | 3 | 4 | 0.000000248053 |
Brassica napus | C02 | 4 | CH_bna_207 | 3 | 4 | 0.000000248053 |
Brassica oleracea | C2 | 4 | CH_bol_95 | 3 | 3 | 0.0000000320521 |
Brassica rapa | A02 | 4 | CH_bra_76 | 3 | 4 | 0.000000110583 |
Cicer arietinum L. | Ca_LG1_v3 | 4 | CH_car_24 | 3 | 4 | 0.0000000363451 |
Capsella rubella | scaffold_2 | 4 | CH_cru_264 | 2 | 2 | 0.000219346 |
Erythranthe guttata | scaffold_9 | 4 | CH_egut_281 | 2 | 2 | 0.0000728147 |
Fragaria vesca | Fvb1 | 4 | CH_fve_346 | 2 | 3 | 0.000530165 |
Lupinus albus | Lalb_Chr22 | 4 | CH_lal_324 | 2 | 2 | 0.000314895 |
Rosa chinensis | RcHm_v2.0_Chr2 | 4 | CH_rch_684 | 2 | 5 | 0.000398629 |
Sequoiadendron giganteum | chr1 | 4 | CH_sgi_460 | 3 | 3 | 0.00000000355983 |
Schrenkiella parvula | ch5-7 | 4 | CH_spa_186 | 2 | 2 | 0.000472404 |
Trochodendron aralioides | group1 | 4 | CH_tar_430 | 2 | 3 | 0.000540303 |
Tarenaya hassleriana | NW_010965372.1 | 4 | CH_tha_130 | 2 | 2 | 0.000209541 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |