Functional clusters

Information

  • Type Gene Ontology
  • Description 3-isopropylmalate dehydrogenase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-4 3 CH_aar_205 2 2 0.000273698
Actinidia chinensis Lachesis_group1 3 CH_ach_173 2 2 0.000162964
Arabidopsis lyrata scaffold_2 3 CH_aly_285 2 2 0.000396027
Brassica carinata ChrC03 3 CH_bca_259 3 5 0.000000239882
Brassica carinata ChrB05 3 CH_bca_819 2 2 0.000448905
Brassica napus A02 3 CH_bna_206 3 4 0.000000248053
Brassica napus C02 3 CH_bna_207 3 4 0.000000248053
Brassica oleracea C2 3 CH_bol_95 3 3 0.0000000320521
Brassica rapa A02 3 CH_bra_76 3 4 0.000000110583
Cicer arietinum L. Ca_LG1_v3 3 CH_car_24 3 4 0.0000000363451
Capsella rubella scaffold_2 3 CH_cru_264 2 2 0.000219346
Erythranthe guttata scaffold_9 3 CH_egut_281 2 2 0.0000728147
Fragaria vesca Fvb1 3 CH_fve_346 2 3 0.000530165
Lupinus albus Lalb_Chr22 3 CH_lal_324 2 2 0.000314895
Rosa chinensis RcHm_v2.0_Chr2 3 CH_rch_684 2 5 0.000398629
Sequoiadendron giganteum chr1 3 CH_sgi_460 3 3 0.00000000355983
Schrenkiella parvula ch5-7 3 CH_spa_186 2 2 0.000472404
Trochodendron aralioides group1 3 CH_tar_430 2 3 0.000540303
Tarenaya hassleriana NW_010965372.1 3 CH_tha_130 2 2 0.000209541
Aethionema arabicum LG-4 4 CH_aar_205 2 2 0.000273698
Actinidia chinensis Lachesis_group1 4 CH_ach_173 2 2 0.000162964
Arabidopsis lyrata scaffold_2 4 CH_aly_285 2 2 0.000396027
Brassica carinata ChrC03 4 CH_bca_259 3 5 0.000000239882
Brassica carinata ChrB05 4 CH_bca_819 2 2 0.000448905
Brassica napus A02 4 CH_bna_206 3 4 0.000000248053
Brassica napus C02 4 CH_bna_207 3 4 0.000000248053
Brassica oleracea C2 4 CH_bol_95 3 3 0.0000000320521
Brassica rapa A02 4 CH_bra_76 3 4 0.000000110583
Cicer arietinum L. Ca_LG1_v3 4 CH_car_24 3 4 0.0000000363451
Capsella rubella scaffold_2 4 CH_cru_264 2 2 0.000219346
Erythranthe guttata scaffold_9 4 CH_egut_281 2 2 0.0000728147
Fragaria vesca Fvb1 4 CH_fve_346 2 3 0.000530165
Lupinus albus Lalb_Chr22 4 CH_lal_324 2 2 0.000314895
Rosa chinensis RcHm_v2.0_Chr2 4 CH_rch_684 2 5 0.000398629
Sequoiadendron giganteum chr1 4 CH_sgi_460 3 3 0.00000000355983
Schrenkiella parvula ch5-7 4 CH_spa_186 2 2 0.000472404
Trochodendron aralioides group1 4 CH_tar_430 2 3 0.000540303
Tarenaya hassleriana NW_010965372.1 4 CH_tha_130 2 2 0.000209541

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001