Functional clusters
Information
- Type Gene Ontology
- Description 3-isopropylmalate dehydratase activity
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Aethionema arabicum | LG-1 | 3 | CH_aar_242 | 2 | 2 | 0.000547395 |
Acer truncatum | chr4 | 3 | CH_acertr_485 | 2 | 3 | 0.000634436 |
Arabidopsis lyrata | scaffold_4 | 3 | CH_aly_287 | 2 | 2 | 0.000396027 |
Arabidopsis thaliana | Chr2 | 3 | CH_ath_469 | 2 | 2 | 0.000171895 |
Brassica carinata | ChrC02 | 3 | CH_bca_824 | 2 | 2 | 0.000448905 |
Brassica rapa | A05 | 3 | CH_bra_258 | 2 | 2 | 0.000429314 |
Carpinus fangiana | Cfa06 | 3 | CH_cfa_309 | 2 | 2 | 0.000454408 |
Capsella rubella | scaffold_4 | 3 | CH_cru_327 | 2 | 2 | 0.000731154 |
Durio zibethinus | NW_019167904.1 | 3 | CH_dzi_245 | 2 | 2 | 0.000139047 |
Erigeron canadensis | Conyza_canadensis_scaffold:9 | 3 | CH_eca_324 | 2 | 2 | 0.000134617 |
Eutrema salsugineum | scaffold_10 | 3 | CH_esa_192 | 2 | 2 | 0.00022845 |
Gossypium hirsutum | D04 | 3 | CH_ghi_698 | 2 | 2 | 0.000961256 |
Gossypium hirsutum | D09 | 3 | CH_ghi_699 | 2 | 2 | 0.000961256 |
Gossypium raimondii | Chr06 | 3 | CH_gra_336 | 2 | 2 | 0.000536107 |
Rosa chinensis | RcHm_v2.0_Chr4 | 3 | CH_rch_498 | 2 | 2 | 0.0000398653 |
Schrenkiella parvula | ch4-6 | 3 | CH_spa_163 | 2 | 2 | 0.000236202 |
Theobroma cacao | Chromosome_4 | 3 | CH_tca_328 | 2 | 2 | 0.000219716 |
Aethionema arabicum | LG-1 | 4 | CH_aar_242 | 2 | 2 | 0.000547395 |
Acer truncatum | chr4 | 4 | CH_acertr_485 | 2 | 3 | 0.000634436 |
Arabidopsis lyrata | scaffold_4 | 4 | CH_aly_287 | 2 | 2 | 0.000396027 |
Arabidopsis thaliana | Chr2 | 4 | CH_ath_469 | 2 | 2 | 0.000171895 |
Brassica carinata | ChrC02 | 4 | CH_bca_824 | 2 | 2 | 0.000448905 |
Brassica rapa | A05 | 4 | CH_bra_258 | 2 | 2 | 0.000429314 |
Carpinus fangiana | Cfa06 | 4 | CH_cfa_309 | 2 | 2 | 0.000454408 |
Capsella rubella | scaffold_4 | 4 | CH_cru_327 | 2 | 2 | 0.000731154 |
Durio zibethinus | NW_019167904.1 | 4 | CH_dzi_245 | 2 | 2 | 0.000139047 |
Erigeron canadensis | Conyza_canadensis_scaffold:9 | 4 | CH_eca_324 | 2 | 2 | 0.000134617 |
Eutrema salsugineum | scaffold_10 | 4 | CH_esa_192 | 2 | 2 | 0.00022845 |
Gossypium hirsutum | D04 | 4 | CH_ghi_698 | 2 | 2 | 0.000961256 |
Gossypium hirsutum | D09 | 4 | CH_ghi_699 | 2 | 2 | 0.000961256 |
Gossypium raimondii | Chr06 | 4 | CH_gra_336 | 2 | 2 | 0.000536107 |
Rosa chinensis | RcHm_v2.0_Chr4 | 4 | CH_rch_498 | 2 | 2 | 0.0000398653 |
Schrenkiella parvula | ch4-6 | 4 | CH_spa_163 | 2 | 2 | 0.000236202 |
Theobroma cacao | Chromosome_4 | 4 | CH_tca_328 | 2 | 2 | 0.000219716 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |