Functional clusters

Information

  • Type Gene Ontology
  • Description 3-isopropylmalate dehydratase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-1 3 CH_aar_242 2 2 0.000547395
Acer truncatum chr4 3 CH_acertr_485 2 3 0.000634436
Arabidopsis lyrata scaffold_4 3 CH_aly_287 2 2 0.000396027
Arabidopsis thaliana Chr2 3 CH_ath_469 2 2 0.000171895
Brassica carinata ChrC02 3 CH_bca_824 2 2 0.000448905
Brassica rapa A05 3 CH_bra_258 2 2 0.000429314
Carpinus fangiana Cfa06 3 CH_cfa_309 2 2 0.000454408
Capsella rubella scaffold_4 3 CH_cru_327 2 2 0.000731154
Durio zibethinus NW_019167904.1 3 CH_dzi_245 2 2 0.000139047
Erigeron canadensis Conyza_canadensis_scaffold:9 3 CH_eca_324 2 2 0.000134617
Eutrema salsugineum scaffold_10 3 CH_esa_192 2 2 0.00022845
Gossypium hirsutum D04 3 CH_ghi_698 2 2 0.000961256
Gossypium hirsutum D09 3 CH_ghi_699 2 2 0.000961256
Gossypium raimondii Chr06 3 CH_gra_336 2 2 0.000536107
Rosa chinensis RcHm_v2.0_Chr4 3 CH_rch_498 2 2 0.0000398653
Schrenkiella parvula ch4-6 3 CH_spa_163 2 2 0.000236202
Theobroma cacao Chromosome_4 3 CH_tca_328 2 2 0.000219716
Aethionema arabicum LG-1 4 CH_aar_242 2 2 0.000547395
Acer truncatum chr4 4 CH_acertr_485 2 3 0.000634436
Arabidopsis lyrata scaffold_4 4 CH_aly_287 2 2 0.000396027
Arabidopsis thaliana Chr2 4 CH_ath_469 2 2 0.000171895
Brassica carinata ChrC02 4 CH_bca_824 2 2 0.000448905
Brassica rapa A05 4 CH_bra_258 2 2 0.000429314
Carpinus fangiana Cfa06 4 CH_cfa_309 2 2 0.000454408
Capsella rubella scaffold_4 4 CH_cru_327 2 2 0.000731154
Durio zibethinus NW_019167904.1 4 CH_dzi_245 2 2 0.000139047
Erigeron canadensis Conyza_canadensis_scaffold:9 4 CH_eca_324 2 2 0.000134617
Eutrema salsugineum scaffold_10 4 CH_esa_192 2 2 0.00022845
Gossypium hirsutum D04 4 CH_ghi_698 2 2 0.000961256
Gossypium hirsutum D09 4 CH_ghi_699 2 2 0.000961256
Gossypium raimondii Chr06 4 CH_gra_336 2 2 0.000536107
Rosa chinensis RcHm_v2.0_Chr4 4 CH_rch_498 2 2 0.0000398653
Schrenkiella parvula ch4-6 4 CH_spa_163 2 2 0.000236202
Theobroma cacao Chromosome_4 4 CH_tca_328 2 2 0.000219716

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001