Functional clusters

Information

  • Type Gene Ontology
  • Description 3-hydroxyisobutyryl-CoA hydrolase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_4 3 CH_aly_131 3 4 0.00000219539
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 3 CH_arhy_132 5 6 0.00000000000192038
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 3 CH_arhy_133 5 6 0.00000000000192038
Brassica carinata ChrB02 3 CH_bca_435 3 6 0.0000132782
Camellia sinensis var. sinensis Contig133 3 CH_camsi_115 5 8 0.0000000000377538
Camellia sinensis var. sinensis Chr6 3 CH_camsi_383 3 3 0.0000041949
Camellia sinensis var. sinensis Chr6 3 CH_camsi_449 3 4 0.000016774
Capsicum annuum PGAv.1.6.scaffold322 3 CH_can_247 3 5 0.0000122783
Coffea canephora chr2 3 CH_ccan_327 2 5 0.000357744
Cardamine hirsuta Chr4 3 CH_chi_151 3 4 0.00000240755
Carya illinoinensis Chr14 3 CH_cil_210 3 3 0.000000322727
Corchorus olitorius AWUE01023851.1 3 CH_col_105 2 3 0.000876168
Capsella rubella scaffold_4 3 CH_cru_39 5 7 0.00000000000207904
Eucalyptus grandis Chr05 3 CH_egr_198 6 10 0.0000000000000601762
Eutrema salsugineum scaffold_10 3 CH_esa_123 3 5 0.0000104333
Fragaria x ananassa Fvb7-2 3 CH_fan_250 3 3 0.00000507417
Fragaria vesca Fvb7 3 CH_fve_166 3 3 0.00000148885
Helianthus annuus HanXRQChr10 3 CH_han_1 23 36 1.1256e-60
Helianthus annuus HanXRQChr06 3 CH_han_332 4 8 0.00000149184
Lonicera japonica GWHAAZE00000005 3 CH_lonja_10 14 17 1.2846e-36
Lonicera japonica GWHAAZE00000003 3 CH_lonja_263 6 55 0.000000651601
Lactuca sativa Lsat_1_v8_lg_5 3 CH_lsa_253 3 4 0.00000453285
Magnolia biondii Chr04 3 CH_mbi_99 4 5 0.000000000170121
Malus domestica Chr02 3 CH_mdo_8 12 55 1.23247e-25
Manihot esculenta Chromosome06 3 CH_mes_82 5 8 0.00000000000147109
Punica granatum NC_045128.1 3 CH_pgr_186 3 4 0.00000283722
Prunus persica Pp02 3 CH_ppe_164 4 7 0.000000009148
Populus trichocarpa Chr18 3 CH_ptr_243 3 3 0.00000143327
Quercus lobata 4 3 CH_qlo_29 10 16 1.18453e-27
Rosa chinensis RcHm_v2.0_Chr1 3 CH_rch_229 4 7 0.0000000121003
Salix brachista GWHAAZH00000018 3 CH_sbr_162 3 3 0.00000131039
Simmondsia chinensis GWHAASQ00000003 3 CH_sci_35 4 7 0.00000000816167
Sequoiadendron giganteum chr7 3 CH_sgi_381 4 4 0.000000000114461
Sapria himalayana scaffold1_25991295 3 CH_shi_76 3 5 0.000000490384
Solanum lycopersicum SL4.0ch05 3 CH_sly_269 3 3 0.00000795817
Solanum lycopersicum SL4.0ch07 3 CH_sly_65 6 11 0.000000000000539261
Schrenkiella parvula ch4-6 3 CH_spa_95 3 6 0.000015612
Solanum pennellii Spenn-ch07 3 CH_spe_118 4 7 0.0000000168054
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_164 3 3 0.0000072536
Vaccinium macrocarpon chr2_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_73 4 4 0.00000000438162
Vigna mungo CM024077.1 3 CH_vmu_142 3 6 0.0000150213
Vitis vinifera chr13 3 CH_vvi_61 6 11 0.000000000000132294
Zea mays 2 3 CH_zma_178 3 11 0.0000362014
Arabidopsis lyrata scaffold_4 4 CH_aly_131 3 4 0.00000219539
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 4 CH_arhy_132 5 6 0.00000000000192038
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 4 CH_arhy_133 5 6 0.00000000000192038
Brassica carinata ChrB02 4 CH_bca_435 3 6 0.0000132782
Camellia sinensis var. sinensis Contig133 4 CH_camsi_115 5 8 0.0000000000377538
Camellia sinensis var. sinensis Chr6 4 CH_camsi_383 3 3 0.0000041949
Camellia sinensis var. sinensis Chr6 4 CH_camsi_449 3 4 0.000016774
Capsicum annuum PGAv.1.6.scaffold322 4 CH_can_247 3 5 0.0000122783
Coffea canephora chr2 4 CH_ccan_327 2 5 0.000357744
Cardamine hirsuta Chr4 4 CH_chi_151 3 4 0.00000240755
Carya illinoinensis Chr14 4 CH_cil_210 3 3 0.000000322727
Corchorus olitorius AWUE01023851.1 4 CH_col_105 2 3 0.000876168
Capsella rubella scaffold_4 4 CH_cru_39 5 7 0.00000000000207904
Eucalyptus grandis Chr05 4 CH_egr_198 6 10 0.0000000000000601762
Eutrema salsugineum scaffold_10 4 CH_esa_123 3 5 0.0000104333
Fragaria x ananassa Fvb7-2 4 CH_fan_250 3 3 0.00000507417
Fragaria vesca Fvb7 4 CH_fve_166 3 3 0.00000148885
Helianthus annuus HanXRQChr10 4 CH_han_1 23 36 1.1256e-60
Helianthus annuus HanXRQChr06 4 CH_han_332 4 8 0.00000149184
Lonicera japonica GWHAAZE00000005 4 CH_lonja_10 14 17 1.2846e-36
Lonicera japonica GWHAAZE00000003 4 CH_lonja_263 6 55 0.000000651601
Lactuca sativa Lsat_1_v8_lg_5 4 CH_lsa_253 3 4 0.00000453285
Magnolia biondii Chr04 4 CH_mbi_99 4 5 0.000000000170121
Malus domestica Chr02 4 CH_mdo_8 12 55 1.23247e-25
Manihot esculenta Chromosome06 4 CH_mes_82 5 8 0.00000000000147109
Punica granatum NC_045128.1 4 CH_pgr_186 3 4 0.00000283722
Prunus persica Pp02 4 CH_ppe_164 4 7 0.000000009148
Populus trichocarpa Chr18 4 CH_ptr_243 3 3 0.00000143327
Quercus lobata 4 4 CH_qlo_29 10 16 1.18453e-27
Rosa chinensis RcHm_v2.0_Chr1 4 CH_rch_229 4 7 0.0000000121003
Salix brachista GWHAAZH00000018 4 CH_sbr_162 3 3 0.00000131039
Simmondsia chinensis GWHAASQ00000003 4 CH_sci_35 4 7 0.00000000816167
Sequoiadendron giganteum chr7 4 CH_sgi_381 4 4 0.000000000114461
Sapria himalayana scaffold1_25991295 4 CH_shi_76 3 5 0.000000490384
Solanum lycopersicum SL4.0ch05 4 CH_sly_269 3 3 0.00000795817
Solanum lycopersicum SL4.0ch07 4 CH_sly_65 6 11 0.000000000000539261
Schrenkiella parvula ch4-6 4 CH_spa_95 3 6 0.000015612
Solanum pennellii Spenn-ch07 4 CH_spe_118 4 7 0.0000000168054
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_164 3 3 0.0000072536
Vaccinium macrocarpon chr2_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_73 4 4 0.00000000438162
Vigna mungo CM024077.1 4 CH_vmu_142 3 6 0.0000150213
Vitis vinifera chr13 4 CH_vvi_61 6 11 0.000000000000132294
Zea mays 2 4 CH_zma_178 3 11 0.0000362014

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001