Functional clusters

Information

  • Type Gene Ontology
  • Description 1,4-alpha-glucan branching enzyme activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Corchorus olitorius AWUE01014262.1 3 CH_col_83 2 2 0.000292099
Carica papaya supercontig_12 3 CH_cpa_229 2 2 0.000285198
Helianthus annuus HanXRQChr13 3 CH_han_584 2 2 0.000231857
Hydrangea macrophylla Hma1.2p1_0956F.1 3 CH_hma_298 2 2 0.000666519
Magnolia biondii Chr10 3 CH_mbi_256 3 8 0.000000792362
Rosa chinensis RcHm_v2.0_Chr5 3 CH_rch_693 2 2 0.000398653
Rhododendron simsii chr04 3 CH_rsi_454 2 2 0.000387184
Sequoiadendron giganteum chr4 3 CH_sgi_396 4 5 0.00000000021849
Sequoiadendron giganteum chr10 3 CH_sgi_723 3 4 0.00000119594
Selenicereus undatus Scaffold_33673 3 CH_sun_192 2 2 0.000435983
Utricularia gibba unitig_32 3 CH_ugi_139 2 2 0.000820479
Corchorus olitorius AWUE01014262.1 4 CH_col_83 2 2 0.000292099
Carica papaya supercontig_12 4 CH_cpa_229 2 2 0.000285198
Helianthus annuus HanXRQChr13 4 CH_han_584 2 2 0.000231857
Hydrangea macrophylla Hma1.2p1_0956F.1 4 CH_hma_298 2 2 0.000666519
Magnolia biondii Chr10 4 CH_mbi_256 3 8 0.000000792362
Rosa chinensis RcHm_v2.0_Chr5 4 CH_rch_693 2 2 0.000398653
Rhododendron simsii chr04 4 CH_rsi_454 2 2 0.000387184
Sequoiadendron giganteum chr4 4 CH_sgi_396 4 5 0.00000000021849
Sequoiadendron giganteum chr10 4 CH_sgi_723 3 4 0.00000119594
Selenicereus undatus Scaffold_33673 4 CH_sun_192 2 2 0.000435983
Utricularia gibba unitig_32 4 CH_ugi_139 2 2 0.000820479

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001