Functional clusters
Information
- Type Gene Ontology
- Description 1,3-beta-D-glucan synthase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Actinidia chinensis | Lachesis_group15 | 3 | CH_ach_40 | 4 | 6 | 0.000000063821 |
| Actinidia chinensis | Lachesis_group9 | 3 | CH_ach_93 | 3 | 3 | 0.00000783901 |
| Brassica carinata | ChrC02 | 3 | CH_bca_483 | 3 | 5 | 0.0000250348 |
| Brassica napus | C04 | 3 | CH_bna_260 | 4 | 14 | 0.00000175031 |
| Brassica napus | A05 | 3 | CH_bna_423 | 3 | 5 | 0.0000510333 |
| Brassica oleracea | C4 | 3 | CH_bol_160 | 4 | 15 | 0.00000104323 |
| Brassica rapa | A05 | 3 | CH_bra_168 | 3 | 6 | 0.0000450845 |
| Corylus avellana | 6 | 3 | CH_cav_435 | 3 | 17 | 0.000985629 |
| Chara braunii | BFEA01000214 | 3 | CH_cbr_44 | 3 | 4 | 0.000000310392 |
| Carpinus fangiana | Cfa04 | 3 | CH_cfa_233 | 3 | 8 | 0.000079395 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2088 | 3 | CH_cqu_207 | 3 | 3 | 0.00000122584 |
| Eucalyptus grandis | Chr01 | 3 | CH_egr_494 | 4 | 11 | 0.000000605882 |
| Eucalyptus grandis | Chr01 | 3 | CH_egr_523 | 4 | 13 | 0.00000131181 |
| Gossypium hirsutum | A08 | 3 | CH_ghi_211 | 4 | 6 | 0.0000000504293 |
| Lonicera japonica | GWHAAZE00000003 | 3 | CH_lonja_212 | 6 | 71 | 0.0000000450935 |
| Quercus lobata | 4 | 3 | CH_qlo_248 | 6 | 25 | 0.0000000000563107 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 3 | CH_rch_97 | 5 | 5 | 0.0000000000000568914 |
| Vaccinium macrocarpon | chr10_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_138 | 3 | 3 | 0.00000155434 |
| Actinidia chinensis | Lachesis_group15 | 4 | CH_ach_40 | 4 | 6 | 0.000000063821 |
| Actinidia chinensis | Lachesis_group9 | 4 | CH_ach_93 | 3 | 3 | 0.00000783901 |
| Brassica carinata | ChrC02 | 4 | CH_bca_483 | 3 | 5 | 0.0000250348 |
| Brassica napus | C04 | 4 | CH_bna_260 | 4 | 14 | 0.00000175031 |
| Brassica napus | A05 | 4 | CH_bna_423 | 3 | 5 | 0.0000510333 |
| Brassica oleracea | C4 | 4 | CH_bol_160 | 4 | 15 | 0.00000104323 |
| Brassica rapa | A05 | 4 | CH_bra_168 | 3 | 6 | 0.0000450845 |
| Corylus avellana | 6 | 4 | CH_cav_435 | 3 | 17 | 0.000985629 |
| Chara braunii | BFEA01000214 | 4 | CH_cbr_44 | 3 | 4 | 0.000000310392 |
| Carpinus fangiana | Cfa04 | 4 | CH_cfa_233 | 3 | 8 | 0.000079395 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2088 | 4 | CH_cqu_207 | 3 | 3 | 0.00000122584 |
| Eucalyptus grandis | Chr01 | 4 | CH_egr_494 | 4 | 11 | 0.000000605882 |
| Eucalyptus grandis | Chr01 | 4 | CH_egr_523 | 4 | 13 | 0.00000131181 |
| Gossypium hirsutum | A08 | 4 | CH_ghi_211 | 4 | 6 | 0.0000000504293 |
| Lonicera japonica | GWHAAZE00000003 | 4 | CH_lonja_212 | 6 | 71 | 0.0000000450935 |
| Quercus lobata | 4 | 4 | CH_qlo_248 | 6 | 25 | 0.0000000000563107 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 4 | CH_rch_97 | 5 | 5 | 0.0000000000000568914 |
| Vaccinium macrocarpon | chr10_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_138 | 3 | 3 | 0.00000155434 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |