Functional clusters

Information

  • Type Gene Ontology
  • Description structural constituent of ribosome

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_1 3 CH_aly_168 5 5 0.0000164509
Brassica napus C03 3 CH_bna_228 6 6 0.000000687766
Brassica oleracea Boleracea_scaffold_49 3 CH_bol_128 13 61 0.00000021328
Gossypium hirsutum A12 3 CH_ghi_262 7 8 0.000000397755
Gossypium hirsutum D06 3 CH_ghi_263 8 12 0.000000426402
Helianthus annuus HanXRQChr05 3 CH_han_357 7 11 0.00000315357
Nelumbo nucifera chr4 3 CH_nnu_148 6 9 0.00000664434
Nelumbo nucifera scaffold021 3 CH_nnu_30 11 19 0.000000000000937388
Prasinoderma coloniale Chr15 3 CH_pco_10 5 8 0.000813854
Rosa chinensis RcHm_v2.0_Chr4 3 CH_rch_715 9 62 0.000545803
Solanum lycopersicum SL4.0ch00 3 CH_sly_258 13 74 0.00000507826
Arabidopsis lyrata scaffold_1 4 CH_aly_168 5 5 0.0000164509
Brassica napus C03 4 CH_bna_228 6 6 0.000000687766
Brassica oleracea Boleracea_scaffold_49 4 CH_bol_128 13 61 0.00000021328
Gossypium hirsutum A12 4 CH_ghi_262 7 8 0.000000397755
Gossypium hirsutum D06 4 CH_ghi_263 8 12 0.000000426402
Helianthus annuus HanXRQChr05 4 CH_han_357 7 11 0.00000315357
Nelumbo nucifera chr4 4 CH_nnu_148 6 9 0.00000664434
Nelumbo nucifera scaffold021 4 CH_nnu_30 11 19 0.000000000000937388
Prasinoderma coloniale Chr15 4 CH_pco_10 5 8 0.000813854
Rosa chinensis RcHm_v2.0_Chr4 4 CH_rch_715 9 62 0.000545803
Solanum lycopersicum SL4.0ch00 4 CH_sly_258 13 74 0.00000507826

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001