Functional clusters
Information
- Type Gene Ontology
- Description structural constituent of ribosome
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis lyrata | scaffold_1 | 3 | CH_aly_168 | 5 | 5 | 0.0000164509 |
| Brassica napus | C03 | 3 | CH_bna_228 | 6 | 6 | 0.000000687766 |
| Brassica oleracea | Boleracea_scaffold_49 | 3 | CH_bol_128 | 13 | 61 | 0.00000021328 |
| Gossypium hirsutum | A12 | 3 | CH_ghi_262 | 7 | 8 | 0.000000397755 |
| Gossypium hirsutum | D06 | 3 | CH_ghi_263 | 8 | 12 | 0.000000426402 |
| Helianthus annuus | HanXRQChr05 | 3 | CH_han_357 | 7 | 11 | 0.00000315357 |
| Nelumbo nucifera | chr4 | 3 | CH_nnu_148 | 6 | 9 | 0.00000664434 |
| Nelumbo nucifera | scaffold021 | 3 | CH_nnu_30 | 11 | 19 | 0.000000000000937388 |
| Prasinoderma coloniale | Chr15 | 3 | CH_pco_10 | 5 | 8 | 0.000813854 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 3 | CH_rch_715 | 9 | 62 | 0.000545803 |
| Solanum lycopersicum | SL4.0ch00 | 3 | CH_sly_258 | 13 | 74 | 0.00000507826 |
| Arabidopsis lyrata | scaffold_1 | 4 | CH_aly_168 | 5 | 5 | 0.0000164509 |
| Brassica napus | C03 | 4 | CH_bna_228 | 6 | 6 | 0.000000687766 |
| Brassica oleracea | Boleracea_scaffold_49 | 4 | CH_bol_128 | 13 | 61 | 0.00000021328 |
| Gossypium hirsutum | A12 | 4 | CH_ghi_262 | 7 | 8 | 0.000000397755 |
| Gossypium hirsutum | D06 | 4 | CH_ghi_263 | 8 | 12 | 0.000000426402 |
| Helianthus annuus | HanXRQChr05 | 4 | CH_han_357 | 7 | 11 | 0.00000315357 |
| Nelumbo nucifera | chr4 | 4 | CH_nnu_148 | 6 | 9 | 0.00000664434 |
| Nelumbo nucifera | scaffold021 | 4 | CH_nnu_30 | 11 | 19 | 0.000000000000937388 |
| Prasinoderma coloniale | Chr15 | 4 | CH_pco_10 | 5 | 8 | 0.000813854 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 4 | CH_rch_715 | 9 | 62 | 0.000545803 |
| Solanum lycopersicum | SL4.0ch00 | 4 | CH_sly_258 | 13 | 74 | 0.00000507826 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |