Functional clusters

Information

  • Type Gene Ontology
  • Description mRNA binding

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr10 3 CH_acertr_349 7 11 0.000158874
Arachis hypogaea arahy.Tifrunner.gnm1.scaffold_36 3 CH_arhy_54 22 39 6.85362e-20
Brassica napus A10 3 CH_bna_596 5 5 0.000489069
Camellia sinensis var. sinensis Chr1 3 CH_camsi_702 6 8 0.000276524
Lotus japonicus chr1 3 CH_lja_368 7 12 0.000816428
Malus domestica Chr11 3 CH_mdo_718 9 28 0.000811543
Olea europaea chr19 3 CH_oeu_151 9 22 0.0000461906
Utricularia gibba unitig_91 3 CH_ugi_3 23 32 5.25995e-23
Acer truncatum chr10 4 CH_acertr_349 7 11 0.000158874
Arachis hypogaea arahy.Tifrunner.gnm1.scaffold_36 4 CH_arhy_54 22 39 6.85362e-20
Brassica napus A10 4 CH_bna_596 5 5 0.000489069
Camellia sinensis var. sinensis Chr1 4 CH_camsi_702 6 8 0.000276524
Lotus japonicus chr1 4 CH_lja_368 7 12 0.000816428
Malus domestica Chr11 4 CH_mdo_718 9 28 0.000811543
Olea europaea chr19 4 CH_oeu_151 9 22 0.0000461906
Utricularia gibba unitig_91 4 CH_ugi_3 23 32 5.25995e-23

Available child term results

Ontology identifier Description Number of clusters
GO:0003730 mRNA 3'-UTR binding 10
GO:0030533 triplet codon-amino acid adaptor activity 12
GO:0035925 mRNA 3'-UTR AU-rich region binding 2
GO:0048027 mRNA 5'-UTR binding 6
GO:1990825 sequence-specific mRNA binding 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001