Functional clusters

Information

  • Type Gene Ontology
  • Description respiratory burst involved in defense response

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr8 3 CH_acertr_176 3 5 0.000000745369
Actinidia chinensis Lachesis_group5 3 CH_ach_239 2 2 0.000543213
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.18 3 CH_arhy_672 2 2 0.000628705
Citrus clementina scaffold_6 3 CH_ccl_403 2 2 0.000492187
Carpinus fangiana Cfa08 3 CH_cfa_142 3 7 0.00000120423
Carica papaya supercontig_104 3 CH_cpa_240 2 2 0.000285198
Daucus carota DCARv2_Chr6 3 CH_dca_390 2 2 0.000637775
Davidia involucrata GWHABJS00000021 3 CH_din_375 2 2 0.000500125
Durio zibethinus NW_019167937.1 3 CH_dzi_308 2 2 0.000463489
Erigeron canadensis Conyza_canadensis_scaffold:9 3 CH_eca_424 2 2 0.000448722
Eucalyptus grandis Chr11 3 CH_egr_291 4 4 0.0000000000757894
Fragaria x ananassa Fvb6-1 3 CH_fan_418 2 2 0.000185036
Gossypium raimondii Chr06 3 CH_gra_303 2 2 0.000321664
Lupinus albus Lalb_Chr02 3 CH_lal_412 2 2 0.000787236
Lonicera japonica GWHAAZE00000001 3 CH_lonja_243 3 3 0.000000301275
Lonicera japonica GWHAAZE00000002 3 CH_lonja_244 3 3 0.000000301275
Lactuca sativa Lsat_1_v8_lg_2 3 CH_lsa_464 2 2 0.000514007
Magnolia biondii Chr17 3 CH_mbi_122 4 12 0.000000000850307
Nelumbo nucifera chr2 3 CH_nnu_316 2 2 0.000722526
Prunus persica Pp07 3 CH_ppe_435 2 2 0.000447577
Quercus lobata 7 3 CH_qlo_447 3 4 0.000000159926
Rhododendron simsii chr03 3 CH_rsi_41 7 13 3.51275e-19
Salix brachista GWHAAZH00000016 3 CH_sbr_261 3 23 0.00010532
Simmondsia chinensis GWHAASQ00000012 3 CH_sci_279 2 2 0.000851426
Solanum lycopersicum SL4.0ch01 3 CH_sly_160 3 3 0.000000103353
Trochodendron aralioides group18 3 CH_tar_153 3 3 0.000000454168
Theobroma cacao Chromosome_5 3 CH_tca_368 2 2 0.000439432
Tripterygium wilfordii NC_052244.1 3 CH_twi_312 2 2 0.00055788
Vigna mungo CM024071.1 3 CH_vmu_312 2 2 0.000646141
Acer truncatum chr8 4 CH_acertr_176 3 5 0.000000745369
Actinidia chinensis Lachesis_group5 4 CH_ach_239 2 2 0.000543213
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.18 4 CH_arhy_672 2 2 0.000628705
Citrus clementina scaffold_6 4 CH_ccl_403 2 2 0.000492187
Carpinus fangiana Cfa08 4 CH_cfa_142 3 7 0.00000120423
Carica papaya supercontig_104 4 CH_cpa_240 2 2 0.000285198
Daucus carota DCARv2_Chr6 4 CH_dca_390 2 2 0.000637775
Davidia involucrata GWHABJS00000021 4 CH_din_375 2 2 0.000500125
Durio zibethinus NW_019167937.1 4 CH_dzi_308 2 2 0.000463489
Erigeron canadensis Conyza_canadensis_scaffold:9 4 CH_eca_424 2 2 0.000448722
Eucalyptus grandis Chr11 4 CH_egr_291 4 4 0.0000000000757894
Fragaria x ananassa Fvb6-1 4 CH_fan_418 2 2 0.000185036
Gossypium raimondii Chr06 4 CH_gra_303 2 2 0.000321664
Lupinus albus Lalb_Chr02 4 CH_lal_412 2 2 0.000787236
Lonicera japonica GWHAAZE00000001 4 CH_lonja_243 3 3 0.000000301275
Lonicera japonica GWHAAZE00000002 4 CH_lonja_244 3 3 0.000000301275
Lactuca sativa Lsat_1_v8_lg_2 4 CH_lsa_464 2 2 0.000514007
Magnolia biondii Chr17 4 CH_mbi_122 4 12 0.000000000850307
Nelumbo nucifera chr2 4 CH_nnu_316 2 2 0.000722526
Prunus persica Pp07 4 CH_ppe_435 2 2 0.000447577
Quercus lobata 7 4 CH_qlo_447 3 4 0.000000159926
Rhododendron simsii chr03 4 CH_rsi_41 7 13 3.51275e-19
Salix brachista GWHAAZH00000016 4 CH_sbr_261 3 23 0.00010532
Simmondsia chinensis GWHAASQ00000012 4 CH_sci_279 2 2 0.000851426
Solanum lycopersicum SL4.0ch01 4 CH_sly_160 3 3 0.000000103353
Trochodendron aralioides group18 4 CH_tar_153 3 3 0.000000454168
Theobroma cacao Chromosome_5 4 CH_tca_368 2 2 0.000439432
Tripterygium wilfordii NC_052244.1 4 CH_twi_312 2 2 0.00055788
Vigna mungo CM024071.1 4 CH_vmu_312 2 2 0.000646141

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001