Functional clusters
Information
- Type Gene Ontology
- Description response to molecule of fungal origin
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Amborella trichopoda | AmTr_v1.0_scaffold00061 | 3 | CH_atr_140 | 4 | 11 | 0.00000437571 |
Coffea canephora | chr0 | 3 | CH_ccan_402 | 3 | 27 | 0.000912189 |
Citrus clementina | scaffold_2 | 3 | CH_ccl_224 | 4 | 6 | 0.00000336332 |
Cucumis sativus L. | chr3 | 3 | CH_csa_248 | 3 | 9 | 0.000490377 |
Populus trichocarpa | Chr12 | 3 | CH_ptr_12 | 14 | 30 | 1.50003e-26 |
Sequoiadendron giganteum | chr1 | 3 | CH_sgi_393 | 5 | 6 | 0.000000000189809 |
Selenicereus undatus | Scaffold_2055 | 3 | CH_sun_46 | 4 | 7 | 0.000000508674 |
Amborella trichopoda | AmTr_v1.0_scaffold00061 | 4 | CH_atr_140 | 4 | 11 | 0.00000437571 |
Coffea canephora | chr0 | 4 | CH_ccan_402 | 3 | 27 | 0.000912189 |
Citrus clementina | scaffold_2 | 4 | CH_ccl_224 | 4 | 6 | 0.00000336332 |
Cucumis sativus L. | chr3 | 4 | CH_csa_248 | 3 | 9 | 0.000490377 |
Populus trichocarpa | Chr12 | 4 | CH_ptr_12 | 14 | 30 | 1.50003e-26 |
Sequoiadendron giganteum | chr1 | 4 | CH_sgi_393 | 5 | 6 | 0.000000000189809 |
Selenicereus undatus | Scaffold_2055 | 4 | CH_sun_46 | 4 | 7 | 0.000000508674 |
Available child term results
Ontology identifier | Description | Number of clusters |
---|---|---|
GO:0032491 | detection of molecule of fungal origin | 32 |
GO:0071226 | cellular response to molecule of fungal origin | 4 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |