Functional clusters

Information

  • Type Gene Ontology
  • Description transverse filament

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr13 3 CH_acertr_363 2 3 0.000211484
Arabidopsis thaliana Chr1 3 CH_ath_416 2 3 0.0000859463
Brassica carinata ChrB03 3 CH_bca_717 2 2 0.000213764
Cardamine hirsuta Chr1 3 CH_chi_112 3 5 0.0000000716621
Capsella rubella scaffold_1 3 CH_cru_261 2 3 0.000219338
Durio zibethinus NW_019167937.1 3 CH_dzi_359 2 7 0.000973213
Helianthus annuus HanXRQChr13 3 CH_han_707 2 7 0.000811422
Lonicera japonica GWHAAZE00000005 3 CH_lonja_429 3 58 0.000165729
Rosa chinensis RcHm_v2.0_Chr7 3 CH_rch_334 3 9 0.000000800825
Selenicereus undatus Scaffold_33675 3 CH_sun_185 2 4 0.000435951
Acer truncatum chr13 4 CH_acertr_363 2 3 0.000211484
Arabidopsis thaliana Chr1 4 CH_ath_416 2 3 0.0000859463
Brassica carinata ChrB03 4 CH_bca_717 2 2 0.000213764
Cardamine hirsuta Chr1 4 CH_chi_112 3 5 0.0000000716621
Capsella rubella scaffold_1 4 CH_cru_261 2 3 0.000219338
Durio zibethinus NW_019167937.1 4 CH_dzi_359 2 7 0.000973213
Helianthus annuus HanXRQChr13 4 CH_han_707 2 7 0.000811422
Lonicera japonica GWHAAZE00000005 4 CH_lonja_429 3 58 0.000165729
Rosa chinensis RcHm_v2.0_Chr7 4 CH_rch_334 3 9 0.000000800825
Selenicereus undatus Scaffold_33675 4 CH_sun_185 2 4 0.000435951

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001