Functional clusters

Information

  • Type Gene Ontology
  • Description condensin complex

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group15 3 CH_ach_238 2 2 0.000543213
Brassica carinata ChrB06 3 CH_bca_893 2 2 0.00059854
Brassica napus C04 3 CH_bna_611 2 2 0.000519726
Capsicum annuum PGAv.1.6.scaffold574 3 CH_can_469 2 2 0.000826105
Chenopodium quinoa C_Quinoa_Scaffold_1529 3 CH_cqu_532 2 2 0.000710732
Davidia involucrata GWHABJS00000001 3 CH_din_416 2 2 0.000750188
Lupinus albus Lalb_Chr19 3 CH_lal_343 2 2 0.000314895
Lonicera japonica GWHAAZE00000008 3 CH_lonja_553 2 2 0.000598874
Lonicera japonica GWHAAZE00000008 3 CH_lonja_554 2 2 0.000598874
Magnolia biondii Chr19 3 CH_mbi_495 2 2 0.000145698
Malus domestica Chr17 3 CH_mdo_262 3 4 0.000000724697
Olea europaea chr7 3 CH_oeu_295 2 2 0.000320273
Striga asiatica scaffold45 3 CH_sas_64 3 27 0.0000685482
Sequoiadendron giganteum chr3 3 CH_sgi_1333 2 2 0.000730727
Sequoiadendron giganteum chr2 3 CH_sgi_1334 2 2 0.000730727
Sequoiadendron giganteum chr11 3 CH_sgi_1335 2 2 0.000730727
Selenicereus undatus Scaffold_33678 3 CH_sun_37 3 4 0.000000126717
Vanilla planifolia CM028151.1 3 CH_vpl_272 2 2 0.000221664
Actinidia chinensis Lachesis_group15 4 CH_ach_238 2 2 0.000543213
Brassica carinata ChrB06 4 CH_bca_893 2 2 0.00059854
Brassica napus C04 4 CH_bna_611 2 2 0.000519726
Capsicum annuum PGAv.1.6.scaffold574 4 CH_can_469 2 2 0.000826105
Chenopodium quinoa C_Quinoa_Scaffold_1529 4 CH_cqu_532 2 2 0.000710732
Davidia involucrata GWHABJS00000001 4 CH_din_416 2 2 0.000750188
Lupinus albus Lalb_Chr19 4 CH_lal_343 2 2 0.000314895
Lonicera japonica GWHAAZE00000008 4 CH_lonja_553 2 2 0.000598874
Lonicera japonica GWHAAZE00000008 4 CH_lonja_554 2 2 0.000598874
Magnolia biondii Chr19 4 CH_mbi_495 2 2 0.000145698
Malus domestica Chr17 4 CH_mdo_262 3 4 0.000000724697
Olea europaea chr7 4 CH_oeu_295 2 2 0.000320273
Striga asiatica scaffold45 4 CH_sas_64 3 27 0.0000685482
Sequoiadendron giganteum chr3 4 CH_sgi_1333 2 2 0.000730727
Sequoiadendron giganteum chr2 4 CH_sgi_1334 2 2 0.000730727
Sequoiadendron giganteum chr11 4 CH_sgi_1335 2 2 0.000730727
Selenicereus undatus Scaffold_33678 4 CH_sun_37 3 4 0.000000126717
Vanilla planifolia CM028151.1 4 CH_vpl_272 2 2 0.000221664

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001