Functional clusters
Information
- Type Gene Ontology
- Description peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr2 | 3 | CH_acertr_381 | 2 | 2 | 0.000211491 |
| Camellia sinensis var. sinensis | Chr5 | 3 | CH_camsi_793 | 2 | 2 | 0.000687821 |
| Cannabis sativa | NC_044378.1 | 3 | CH_cansat_278 | 2 | 2 | 0.000196993 |
| Durio zibethinus | NW_019167993.1 | 3 | CH_dzi_273 | 2 | 2 | 0.000278093 |
| Eucalyptus grandis | Chr08 | 3 | CH_egr_456 | 3 | 3 | 0.000000179842 |
| Eucalyptus grandis | Chr06 | 3 | CH_egr_536 | 3 | 5 | 0.000001798 |
| Gossypium hirsutum | D13 | 3 | CH_ghi_694 | 2 | 2 | 0.000961256 |
| Hydrangea macrophylla | Hma1.2p1_0083F.1 | 3 | CH_hma_176 | 2 | 2 | 0.000111086 |
| Lotus japonicus | chr3 | 3 | CH_lja_279 | 2 | 2 | 0.000214523 |
| Lactuca sativa | Lsat_1_v8_lg_9 | 3 | CH_lsa_377 | 2 | 2 | 0.000154202 |
| Malus domestica | Chr03 | 3 | CH_mdo_288 | 3 | 6 | 0.0000015096 |
| Medicago truncatula | chr1 | 3 | CH_mtr_567 | 2 | 2 | 0.000123259 |
| Oryza sativa ssp. japonica | chr01 | 3 | CH_osa_186 | 3 | 9 | 0.00000140537 |
| Pisum sativum | chr6LG2 | 3 | CH_psa_278 | 2 | 2 | 0.00015649 |
| Quercus lobata | 4 | 3 | CH_qlo_1010 | 2 | 2 | 0.000774433 |
| Quercus lobata | CM012294 | 3 | CH_qlo_469 | 3 | 4 | 0.000000319847 |
| Trochodendron aralioides | group9 | 3 | CH_tar_170 | 3 | 6 | 0.00000108111 |
| Theobroma cacao | Chromosome_7 | 3 | CH_tca_168 | 3 | 5 | 0.000000321804 |
| Tripterygium wilfordii | NC_052250.1 | 3 | CH_twi_280 | 2 | 2 | 0.000334728 |
| Vaccinium macrocarpon | chr6_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_393 | 2 | 2 | 0.000929238 |
| Zea mays | 8 | 3 | CH_zma_358 | 2 | 3 | 0.000920308 |
| Acer truncatum | chr2 | 4 | CH_acertr_381 | 2 | 2 | 0.000211491 |
| Camellia sinensis var. sinensis | Chr5 | 4 | CH_camsi_793 | 2 | 2 | 0.000687821 |
| Cannabis sativa | NC_044378.1 | 4 | CH_cansat_278 | 2 | 2 | 0.000196993 |
| Durio zibethinus | NW_019167993.1 | 4 | CH_dzi_273 | 2 | 2 | 0.000278093 |
| Eucalyptus grandis | Chr08 | 4 | CH_egr_456 | 3 | 3 | 0.000000179842 |
| Eucalyptus grandis | Chr06 | 4 | CH_egr_536 | 3 | 5 | 0.000001798 |
| Gossypium hirsutum | D13 | 4 | CH_ghi_694 | 2 | 2 | 0.000961256 |
| Hydrangea macrophylla | Hma1.2p1_0083F.1 | 4 | CH_hma_176 | 2 | 2 | 0.000111086 |
| Lotus japonicus | chr3 | 4 | CH_lja_279 | 2 | 2 | 0.000214523 |
| Lactuca sativa | Lsat_1_v8_lg_9 | 4 | CH_lsa_377 | 2 | 2 | 0.000154202 |
| Malus domestica | Chr03 | 4 | CH_mdo_288 | 3 | 6 | 0.0000015096 |
| Medicago truncatula | chr1 | 4 | CH_mtr_567 | 2 | 2 | 0.000123259 |
| Oryza sativa ssp. japonica | chr01 | 4 | CH_osa_186 | 3 | 9 | 0.00000140537 |
| Pisum sativum | chr6LG2 | 4 | CH_psa_278 | 2 | 2 | 0.00015649 |
| Quercus lobata | 4 | 4 | CH_qlo_1010 | 2 | 2 | 0.000774433 |
| Quercus lobata | CM012294 | 4 | CH_qlo_469 | 3 | 4 | 0.000000319847 |
| Trochodendron aralioides | group9 | 4 | CH_tar_170 | 3 | 6 | 0.00000108111 |
| Theobroma cacao | Chromosome_7 | 4 | CH_tca_168 | 3 | 5 | 0.000000321804 |
| Tripterygium wilfordii | NC_052250.1 | 4 | CH_twi_280 | 2 | 2 | 0.000334728 |
| Vaccinium macrocarpon | chr6_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_393 | 2 | 2 | 0.000929238 |
| Zea mays | 8 | 4 | CH_zma_358 | 2 | 3 | 0.000920308 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |