Functional clusters

Information

  • Type MapMan
  • Description Secondary metabolism.phenolics.flavonoid biosynthesis.isoflavonoids.2-hydroxyisoflavanone dehydratase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr4 1 CH_acertr_88 3 3 0.000000007455
Actinidia chinensis Lachesis_group10 1 CH_ach_144 2 2 0.000162964
Camellia sinensis var. sinensis Chr5 1 CH_camsi_89 4 5 0.00000000000144632
Capsicum annuum PGAv.1.6.scaffold668 1 CH_can_384 2 4 0.000495622
Cicer arietinum L. Ca_LG8_v3 1 CH_car_91 3 5 0.00000363328
Coffea canephora chr3 1 CH_ccan_21 4 13 0.000000000000165698
Carya illinoinensis Chr01 1 CH_cil_104 4 4 0.00000000000357228
Davidia involucrata GWHABJS00000016 1 CH_din_88 3 4 0.0000000150075
Erigeron canadensis Conyza_canadensis_scaffold:4 1 CH_eca_162 3 7 0.000000422782
Fragaria x ananassa Fvb4-1 1 CH_fan_50 4 6 0.0000000000199553
Fragaria vesca Fvb4 1 CH_fve_150 3 5 0.000000208209
Glycine max Gm01 1 CH_gma_202 3 5 0.000000756233
Glycine max Gm10 1 CH_gma_606 2 2 0.00079707
Lupinus albus Lalb_Chr09 1 CH_lal_365 2 2 0.000524824
Lotus japonicus chr5 1 CH_lja_88 3 3 0.00000000767031
Malus domestica Chr13 1 CH_mdo_235 3 6 0.000000431351
Medicago truncatula chr5 1 CH_mtr_424 3 7 0.00000744125
Medicago truncatula chr1 1 CH_mtr_489 3 11 0.0000350643
Prunus persica Pp01 1 CH_ppe_340 2 2 0.0000745962
Phaseolus vulgaris Chr07 1 CH_pvu_118 3 3 0.0000000323906
Quercus lobata 6 1 CH_qlo_109 6 9 6.40477e-16
Quercus lobata 1 1 CH_qlo_569 3 5 0.000008793
Rosa chinensis RcHm_v2.0_Chr4 1 CH_rch_88 5 14 0.000000000000227491
Rhododendron simsii chr04 1 CH_rsi_145 3 3 0.00000000624652
Trifolium pratense Tp57577_TGAC_v2_LG2 1 CH_tpr_370 2 2 0.000454184
Vigna mungo CM024071.1 1 CH_vmu_346 2 2 0.000387685
Vigna mungo CM024074.1 1 CH_vmu_347 2 2 0.000387685
Acer truncatum chr4 2 CH_acertr_88 3 3 0.000000007455
Actinidia chinensis Lachesis_group10 2 CH_ach_144 2 2 0.000162964
Camellia sinensis var. sinensis Chr5 2 CH_camsi_89 4 5 0.00000000000144632
Capsicum annuum PGAv.1.6.scaffold668 2 CH_can_384 2 4 0.000495622
Cicer arietinum L. Ca_LG8_v3 2 CH_car_91 3 5 0.00000363328
Coffea canephora chr3 2 CH_ccan_21 4 13 0.000000000000165698
Carya illinoinensis Chr01 2 CH_cil_104 4 4 0.00000000000357228
Davidia involucrata GWHABJS00000016 2 CH_din_88 3 4 0.0000000150075
Erigeron canadensis Conyza_canadensis_scaffold:4 2 CH_eca_162 3 7 0.000000422782
Eucalyptus grandis Chr08 2 CH_egr_687 2 2 0.0000585274
Fragaria x ananassa Fvb4-1 2 CH_fan_50 4 6 0.0000000000199553
Fragaria vesca Fvb4 2 CH_fve_150 3 5 0.000000208209
Glycine max Gm01 2 CH_gma_202 3 5 0.000000756233
Glycine max Gm10 2 CH_gma_606 2 2 0.00079707
Lupinus albus Lalb_Chr09 2 CH_lal_365 2 2 0.000524824
Lotus japonicus chr5 2 CH_lja_88 3 3 0.00000000767031
Malus domestica Chr13 2 CH_mdo_235 3 6 0.000000431351
Prunus persica Pp01 2 CH_ppe_340 2 2 0.0000745962
Phaseolus vulgaris Chr07 2 CH_pvu_118 3 3 0.0000000323906
Quercus lobata 6 2 CH_qlo_109 6 9 6.40477e-16
Quercus lobata 1 2 CH_qlo_569 3 5 0.000008793
Rosa chinensis RcHm_v2.0_Chr4 2 CH_rch_88 5 14 0.000000000000227491
Rhododendron simsii chr04 2 CH_rsi_145 3 3 0.00000000624652
Trifolium pratense Tp57577_TGAC_v2_LG2 2 CH_tpr_370 2 2 0.000454184
Vigna mungo CM024071.1 2 CH_vmu_346 2 2 0.000387685
Vigna mungo CM024074.1 2 CH_vmu_347 2 2 0.000387685

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001