Functional clusters
Information
- Type MapMan
- Description Secondary metabolism.phenolics.flavonoid biosynthesis.flavonol glycosides.flavonol 3-O-glycosyltransferase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr9 | 1 | CH_acertr_178 | 3 | 4 | 0.00000166964 |
| Acer truncatum | chr5 | 1 | CH_acertr_47 | 5 | 18 | 0.0000000000887578 |
| Arabidopsis lyrata | scaffold_7 | 1 | CH_aly_108 | 3 | 3 | 0.0000000653509 |
| Arabidopsis lyrata | scaffold_3 | 1 | CH_aly_418 | 2 | 2 | 0.000660044 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_1 | 1 | CH_amhyb_267 | 2 | 2 | 0.000841751 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_1 | 1 | CH_amhyb_268 | 2 | 2 | 0.000841751 |
| Aquilegia oxysepala | CHR06 | 1 | CH_aox_31 | 4 | 7 | 0.000000000270784 |
| Arabidopsis thaliana | Chr4 | 1 | CH_ath_134 | 3 | 5 | 0.000000123109 |
| Arabidopsis thaliana | Chr2 | 1 | CH_ath_348 | 2 | 2 | 0.000286492 |
| Brassica carinata | ChrC01 | 1 | CH_bca_293 | 3 | 3 | 0.000000311873 |
| Brassica carinata | ChrB03 | 1 | CH_bca_294 | 3 | 3 | 0.000000311873 |
| Brassica carinata | Contig1304 | 1 | CH_bca_366 | 3 | 4 | 0.00000124736 |
| Brassica napus | A01 | 1 | CH_bna_207 | 3 | 3 | 0.000000147645 |
| Brassica napus | C01 | 1 | CH_bna_208 | 3 | 3 | 0.000000147645 |
| Brassica oleracea | C1 | 1 | CH_bol_100 | 3 | 3 | 0.0000000897457 |
| Brassica oleracea | C3 | 1 | CH_bol_101 | 3 | 3 | 0.0000000897457 |
| Brassica rapa | A01 | 1 | CH_bra_98 | 3 | 3 | 0.000000232236 |
| Brassica rapa | A08 | 1 | CH_bra_99 | 3 | 3 | 0.000000232236 |
| Beta vulgaris | Chr9_EL10_PGA_scaffold8 | 1 | CH_bvu_97 | 3 | 4 | 0.000000164502 |
| Camellia sinensis var. sinensis | Chr3 | 1 | CH_camsi_157 | 4 | 7 | 0.000000000708507 |
| Camellia sinensis var. sinensis | Chr4 | 1 | CH_camsi_171 | 4 | 8 | 0.00000000141688 |
| Cicer arietinum L. | Ca_LG6_v3 | 1 | CH_car_69 | 3 | 6 | 0.000000726783 |
| Citrus clementina | scaffold_8 | 1 | CH_ccl_312 | 2 | 2 | 0.0000820311 |
| Carya illinoinensis | Chr14 | 1 | CH_cil_61 | 7 | 27 | 0.00000000000000313174 |
| Citrullus lanatus | CG_Chr02 | 1 | CH_cla_65 | 3 | 6 | 0.000000944189 |
| Cucumis melo | chr01 | 1 | CH_cme_26 | 5 | 6 | 0.00000000000000534832 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1257 | 1 | CH_cqu_72 | 4 | 4 | 0.00000000010532 |
| Capsella rubella | scaffold_7 | 1 | CH_cru_130 | 3 | 3 | 0.000000080191 |
| Cucumis sativus L. | chr7 | 1 | CH_csa_63 | 4 | 7 | 0.000000000305351 |
| Durio zibethinus | NW_019167915.1 | 1 | CH_dzi_26 | 5 | 10 | 0.000000000000183132 |
| Eutrema salsugineum | scaffold_1 | 1 | CH_esa_254 | 2 | 2 | 0.00022845 |
| Fragaria x ananassa | Fvb2-3 | 1 | CH_fan_170 | 3 | 4 | 0.000000451918 |
| Fragaria x ananassa | Fvb2-2 | 1 | CH_fan_30 | 5 | 10 | 0.000000000000175428 |
| Fragaria vesca | Fvb2 | 1 | CH_fve_17 | 7 | 16 | 1.35518e-18 |
| Glycine max | Gm02 | 1 | CH_gma_21 | 6 | 8 | 3.47437e-19 |
| Gossypium raimondii | Chr13 | 1 | CH_gra_355 | 2 | 2 | 0.000321664 |
| Lupinus albus | Lalb_Chr09 | 1 | CH_lal_269 | 2 | 2 | 0.000157447 |
| Lotus japonicus | chr4 | 1 | CH_lja_128 | 3 | 3 | 0.000000153406 |
| Lonicera japonica | GWHAAZE00000009 | 1 | CH_lonja_14 | 10 | 33 | 7.14876e-26 |
| Manihot esculenta | Chromosome10 | 1 | CH_mes_314 | 3 | 13 | 0.0000894513 |
| Medicago truncatula | chr4 | 1 | CH_mtr_617 | 2 | 2 | 0.000123259 |
| Olea europaea | chr3 | 1 | CH_oeu_172 | 2 | 2 | 0.0000533789 |
| Petunia axillaris | Peaxi162Scf00016 | 1 | CH_pax_18 | 5 | 7 | 0.0000000000000102918 |
| Prunus persica | Pp08 | 1 | CH_ppe_6 | 11 | 13 | 1.62486e-35 |
| Pisum sativum | chr7LG7 | 1 | CH_psa_80 | 3 | 4 | 0.0000000163262 |
| Papaver somniferum | NC_039363.1 | 1 | CH_pso_176 | 4 | 10 | 0.00000000981964 |
| Papaver somniferum | NC_039358.1 | 1 | CH_pso_23 | 7 | 10 | 7.93828e-21 |
| Populus trichocarpa | Chr09 | 1 | CH_ptr_260 | 3 | 6 | 0.00000841518 |
| Populus trichocarpa | Chr01 | 1 | CH_ptr_44 | 6 | 10 | 2.56018e-16 |
| Phaseolus vulgaris | Chr03 | 1 | CH_pvu_142 | 3 | 3 | 0.000000161953 |
| Quercus lobata | 11 | 1 | CH_qlo_119 | 7 | 51 | 0.00000000000000209728 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 1 | CH_rch_20 | 11 | 61 | 1.28627e-26 |
| Rhododendron simsii | chr11 | 1 | CH_rsi_80 | 4 | 6 | 0.0000000000120928 |
| Simmondsia chinensis | GWHAASQ00000011 | 1 | CH_sci_201 | 2 | 3 | 0.000255417 |
| Sechium edule | LG10 | 1 | CH_sed_38 | 5 | 25 | 0.0000000000618713 |
| Solanum lycopersicum | SL4.0ch01 | 1 | CH_sly_76 | 4 | 6 | 0.00000000000909929 |
| Schrenkiella parvula | ch7-5 | 1 | CH_spa_76 | 3 | 3 | 0.0000000371957 |
| Solanum pennellii | Spenn-ch01 | 1 | CH_spe_50 | 4 | 5 | 0.00000000000132001 |
| Solanum tuberosum | ST4.03ch01 | 1 | CH_stu_43 | 5 | 7 | 0.00000000000000108628 |
| Selenicereus undatus | Scaffold_33678 | 1 | CH_sun_64 | 3 | 7 | 0.00000277111 |
| Trochodendron aralioides | group11 | 1 | CH_tar_140 | 3 | 3 | 0.000000189236 |
| Trochodendron aralioides | group5 | 1 | CH_tar_178 | 3 | 5 | 0.00000189191 |
| Theobroma cacao | Chromosome_2 | 1 | CH_tca_51 | 5 | 10 | 0.00000000000304388 |
| Tarenaya hassleriana | NW_010963495.1 | 1 | CH_tha_176 | 2 | 2 | 0.000419082 |
| Tripterygium wilfordii | NC_052233.1 | 1 | CH_twi_33 | 4 | 4 | 0.00000000000259943 |
| Vaccinium macrocarpon | chr1_Vaccinium_macrocarpon_Stevens_v1 | 1 | CH_vma_97 | 3 | 4 | 0.000000051809 |
| Acer truncatum | chr9 | 2 | CH_acertr_178 | 3 | 4 | 0.00000166964 |
| Acer truncatum | chr5 | 2 | CH_acertr_47 | 5 | 18 | 0.0000000000887578 |
| Arabidopsis lyrata | scaffold_7 | 2 | CH_aly_108 | 3 | 3 | 0.0000000653509 |
| Arabidopsis lyrata | scaffold_3 | 2 | CH_aly_418 | 2 | 2 | 0.000660044 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_1 | 2 | CH_amhyb_267 | 2 | 2 | 0.000841751 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_1 | 2 | CH_amhyb_268 | 2 | 2 | 0.000841751 |
| Aquilegia oxysepala | CHR06 | 2 | CH_aox_31 | 4 | 7 | 0.000000000270784 |
| Arabidopsis thaliana | Chr4 | 2 | CH_ath_134 | 3 | 5 | 0.000000123109 |
| Arabidopsis thaliana | Chr2 | 2 | CH_ath_348 | 2 | 2 | 0.000286492 |
| Brassica carinata | ChrC01 | 2 | CH_bca_293 | 3 | 3 | 0.000000311873 |
| Brassica carinata | ChrB03 | 2 | CH_bca_294 | 3 | 3 | 0.000000311873 |
| Brassica carinata | Contig1304 | 2 | CH_bca_366 | 3 | 4 | 0.00000124736 |
| Brassica oleracea | C1 | 2 | CH_bol_100 | 3 | 3 | 0.0000000897457 |
| Brassica oleracea | C3 | 2 | CH_bol_101 | 3 | 3 | 0.0000000897457 |
| Brassica rapa | A01 | 2 | CH_bra_98 | 3 | 3 | 0.000000232236 |
| Brassica rapa | A08 | 2 | CH_bra_99 | 3 | 3 | 0.000000232236 |
| Beta vulgaris | Chr9_EL10_PGA_scaffold8 | 2 | CH_bvu_97 | 3 | 4 | 0.000000164502 |
| Camellia sinensis var. sinensis | Chr3 | 2 | CH_camsi_157 | 4 | 7 | 0.000000000708507 |
| Camellia sinensis var. sinensis | Chr4 | 2 | CH_camsi_171 | 4 | 8 | 0.00000000141688 |
| Cicer arietinum L. | Ca_LG6_v3 | 2 | CH_car_69 | 3 | 6 | 0.000000726783 |
| Citrus clementina | scaffold_8 | 2 | CH_ccl_312 | 2 | 2 | 0.0000820311 |
| Carya illinoinensis | Chr14 | 2 | CH_cil_61 | 7 | 27 | 0.00000000000000313174 |
| Citrullus lanatus | CG_Chr02 | 2 | CH_cla_65 | 3 | 6 | 0.000000944189 |
| Cucumis melo | chr01 | 2 | CH_cme_26 | 5 | 6 | 0.00000000000000534832 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1257 | 2 | CH_cqu_72 | 4 | 4 | 0.00000000010532 |
| Capsella rubella | scaffold_7 | 2 | CH_cru_130 | 3 | 3 | 0.000000080191 |
| Cucumis sativus L. | chr7 | 2 | CH_csa_63 | 4 | 7 | 0.000000000305351 |
| Durio zibethinus | NW_019167915.1 | 2 | CH_dzi_26 | 5 | 10 | 0.000000000000183132 |
| Eucalyptus grandis | Chr09 | 2 | CH_egr_287 | 7 | 63 | 0.000000000291939 |
| Eucalyptus grandis | Chr09 | 2 | CH_egr_299 | 5 | 10 | 0.000000000582813 |
| Eucalyptus grandis | Chr02 | 2 | CH_egr_585 | 3 | 3 | 0.00000791305 |
| Eutrema salsugineum | scaffold_1 | 2 | CH_esa_254 | 2 | 2 | 0.00022845 |
| Fragaria x ananassa | Fvb2-3 | 2 | CH_fan_170 | 3 | 4 | 0.000000451918 |
| Fragaria x ananassa | Fvb2-2 | 2 | CH_fan_30 | 5 | 10 | 0.000000000000175428 |
| Fragaria vesca | Fvb2 | 2 | CH_fve_17 | 7 | 16 | 1.35518e-18 |
| Gossypium hirsutum | A13 | 2 | CH_ghi_783 | 2 | 2 | 0.000560733 |
| Gossypium hirsutum | D12 | 2 | CH_ghi_784 | 2 | 2 | 0.000560733 |
| Gossypium hirsutum | D13 | 2 | CH_ghi_785 | 2 | 2 | 0.000560733 |
| Glycine max | Gm02 | 2 | CH_gma_21 | 6 | 8 | 3.47437e-19 |
| Gossypium raimondii | Chr13 | 2 | CH_gra_355 | 2 | 2 | 0.000321664 |
| Lupinus albus | Lalb_Chr09 | 2 | CH_lal_269 | 2 | 2 | 0.000157447 |
| Lotus japonicus | chr4 | 2 | CH_lja_128 | 3 | 3 | 0.000000153406 |
| Lonicera japonica | GWHAAZE00000009 | 2 | CH_lonja_14 | 10 | 33 | 7.14876e-26 |
| Manihot esculenta | Chromosome10 | 2 | CH_mes_314 | 3 | 13 | 0.0000894513 |
| Olea europaea | chr3 | 2 | CH_oeu_172 | 2 | 2 | 0.0000533789 |
| Petunia axillaris | Peaxi162Scf00016 | 2 | CH_pax_18 | 5 | 7 | 0.0000000000000102918 |
| Prunus persica | Pp08 | 2 | CH_ppe_6 | 11 | 13 | 1.62486e-35 |
| Pisum sativum | chr7LG7 | 2 | CH_psa_80 | 3 | 4 | 0.0000000163262 |
| Papaver somniferum | NC_039363.1 | 2 | CH_pso_176 | 4 | 10 | 0.00000000981964 |
| Papaver somniferum | NC_039358.1 | 2 | CH_pso_23 | 7 | 10 | 7.93828e-21 |
| Populus trichocarpa | Chr09 | 2 | CH_ptr_260 | 3 | 6 | 0.00000841518 |
| Populus trichocarpa | Chr01 | 2 | CH_ptr_44 | 6 | 10 | 2.56018e-16 |
| Phaseolus vulgaris | Chr03 | 2 | CH_pvu_142 | 3 | 3 | 0.000000161953 |
| Quercus lobata | 11 | 2 | CH_qlo_119 | 7 | 51 | 0.00000000000000209728 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 2 | CH_rch_20 | 11 | 61 | 1.28627e-26 |
| Rhododendron simsii | chr11 | 2 | CH_rsi_80 | 4 | 6 | 0.0000000000120928 |
| Simmondsia chinensis | GWHAASQ00000011 | 2 | CH_sci_201 | 2 | 3 | 0.000255417 |
| Sechium edule | LG10 | 2 | CH_sed_38 | 5 | 25 | 0.0000000000618713 |
| Solanum lycopersicum | SL4.0ch01 | 2 | CH_sly_76 | 4 | 6 | 0.00000000000909929 |
| Schrenkiella parvula | ch7-5 | 2 | CH_spa_76 | 3 | 3 | 0.0000000371957 |
| Solanum pennellii | Spenn-ch01 | 2 | CH_spe_50 | 4 | 5 | 0.00000000000132001 |
| Solanum tuberosum | ST4.03ch01 | 2 | CH_stu_43 | 5 | 7 | 0.00000000000000108628 |
| Selenicereus undatus | Scaffold_33678 | 2 | CH_sun_64 | 3 | 7 | 0.00000277111 |
| Trochodendron aralioides | group11 | 2 | CH_tar_140 | 3 | 3 | 0.000000189236 |
| Trochodendron aralioides | group5 | 2 | CH_tar_178 | 3 | 5 | 0.00000189191 |
| Theobroma cacao | Chromosome_2 | 2 | CH_tca_51 | 5 | 10 | 0.00000000000304388 |
| Tarenaya hassleriana | NW_010963495.1 | 2 | CH_tha_176 | 2 | 2 | 0.000419082 |
| Tripterygium wilfordii | NC_052233.1 | 2 | CH_twi_33 | 4 | 4 | 0.00000000000259943 |
| Vaccinium macrocarpon | chr1_Vaccinium_macrocarpon_Stevens_v1 | 2 | CH_vma_97 | 3 | 4 | 0.000000051809 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |