Functional clusters

Information

  • Type MapMan
  • Description Secondary metabolism.phenolics.flavonoid biosynthesis.chalcones.chalcone synthase activity.regulatory substrate adaptor of SCF ubiquitin ligase (KFB-CHS)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Corylus avellana 9 1 CH_cav_237 2 2 0.0000766695
Carpinus fangiana Cfa03 1 CH_cfa_218 2 2 0.0000757346
Durio zibethinus NW_019168270.1 1 CH_dzi_216 2 3 0.000139043
Malus domestica Chr16 1 CH_mdo_444 2 2 0.000113763
Marchantia polymorpha scaffold_119 1 CH_mpo_116 2 4 0.000662581
Olea europaea chr12 1 CH_oeu_367 2 2 0.000533789
Sechium edule LG03 1 CH_sed_194 2 2 0.0000713419
Theobroma cacao Chromosome_2 1 CH_tca_279 2 2 0.0000732386
Corylus avellana 9 2 CH_cav_237 2 2 0.0000766695
Carpinus fangiana Cfa03 2 CH_cfa_218 2 2 0.0000757346
Durio zibethinus NW_019168270.1 2 CH_dzi_216 2 3 0.000139043
Eucalyptus grandis Chr08 2 CH_egr_664 2 2 0.0000585274
Malus domestica Chr16 2 CH_mdo_444 2 2 0.000113763
Marchantia polymorpha scaffold_119 2 CH_mpo_116 2 4 0.000662581
Olea europaea chr12 2 CH_oeu_367 2 2 0.000533789
Sechium edule LG03 2 CH_sed_194 2 2 0.0000713419
Theobroma cacao Chromosome_2 2 CH_tca_279 2 2 0.0000732386

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001