Functional clusters

Information

  • Type MapMan
  • Description Secondary metabolism.phenolics.p-coumaroyl-CoA biosynthesis.cinnamate 4-hydroxylase (C4H)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrB01 1 CH_bca_944 2 2 0.000448905
Brassica oleracea C4 1 CH_bol_361 2 2 0.000326861
Brassica oleracea C3 1 CH_bol_447 2 3 0.000980536
Brassica rapa A03 1 CH_bra_331 2 2 0.000429314
Brassica rapa A04 1 CH_bra_332 2 2 0.000429314
Capsicum annuum PGAv.1.6.scaffold874 1 CH_can_293 2 2 0.0000826105
Carya illinoinensis Chr13 1 CH_cil_443 2 2 0.000185948
Erythranthe guttata scaffold_14 1 CH_egut_179 3 5 0.000000318089
Eutrema salsugineum scaffold_10 1 CH_esa_194 2 2 0.0000761499
Malus domestica Chr03 1 CH_mdo_579 2 2 0.000227527
Marchantia polymorpha scaffold_81 1 CH_mpo_85 2 2 0.000110442
Schrenkiella parvula ch4-6 1 CH_spa_183 2 2 0.000078734
Solanum pennellii Spenn-ch06 1 CH_spe_300 2 2 0.000044479
Brassica carinata ChrB01 2 CH_bca_944 2 2 0.000448905
Brassica oleracea C4 2 CH_bol_361 2 2 0.000326861
Brassica oleracea C3 2 CH_bol_447 2 3 0.000980536
Brassica rapa A03 2 CH_bra_331 2 2 0.000429314
Brassica rapa A04 2 CH_bra_332 2 2 0.000429314
Capsicum annuum PGAv.1.6.scaffold874 2 CH_can_293 2 2 0.0000826105
Carya illinoinensis Chr13 2 CH_cil_443 2 2 0.000185948
Erythranthe guttata scaffold_14 2 CH_egut_179 3 5 0.000000318089
Eutrema salsugineum scaffold_10 2 CH_esa_194 2 2 0.0000761499
Malus domestica Chr03 2 CH_mdo_579 2 2 0.000227527
Marchantia polymorpha scaffold_81 2 CH_mpo_85 2 2 0.000110442
Schrenkiella parvula ch4-6 2 CH_spa_183 2 2 0.000078734
Solanum pennellii Spenn-ch06 2 CH_spe_300 2 2 0.000044479

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001