Functional clusters

Information

  • Type MapMan
  • Description Secondary metabolism.terpenoids.carotenoid biosynthesis.carotenes.lycopene beta cyclase (LCY-b)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Camellia sinensis var. sinensis Chr10 1 CH_camsi_370 3 11 0.00000208101
Medicago truncatula chr2 1 CH_mtr_615 2 2 0.000123259
Prunus persica Pp06 1 CH_ppe_415 2 2 0.000223789
Pisum sativum chr5LG3 1 CH_psa_135 3 7 0.000000571327
Salix brachista GWHAAZH00000016 1 CH_sbr_340 2 2 0.000378084
Trifolium pratense Tp57577_TGAC_v2_LG7 1 CH_tpr_317 2 2 0.000227092
Camellia sinensis var. sinensis Chr10 2 CH_camsi_370 3 11 0.00000208101
Prunus persica Pp06 2 CH_ppe_415 2 2 0.000223789
Pisum sativum chr5LG3 2 CH_psa_135 3 7 0.000000571327
Salix brachista GWHAAZH00000016 2 CH_sbr_340 2 2 0.000378084
Trifolium pratense Tp57577_TGAC_v2_LG7 2 CH_tpr_317 2 2 0.000227092

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001