Functional clusters

Information

  • Type MapMan
  • Description Secondary metabolism.terpenoids.terpene biosynthesis.mono-/sesquiterpene-/diterpene synthase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-9 1 CH_aar_124 3 4 0.0000407303
Amaranthus hybridus AmaHy_arrow1_Scaffold_9 1 CH_amhyb_68 3 3 0.0000023383
Aquilegia oxysepala CHR04 1 CH_aox_6 9 20 1.89734e-18
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.18 1 CH_arhy_10 17 34 3.26582e-37
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.18 1 CH_arhy_110 7 16 0.00000000000169965
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.08 1 CH_arhy_314 4 6 0.00000171941
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.08 1 CH_arhy_56 8 13 2.04008e-16
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.20 1 CH_arhy_609 3 4 0.000408779
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.10 1 CH_arhy_610 3 4 0.000408779
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.08 1 CH_arhy_611 3 4 0.000408779
Arabidopsis thaliana Chr3 1 CH_ath_379 3 9 0.000463991
Amborella trichopoda AmTr_v1.0_scaffold00043 1 CH_atr_89 4 7 0.0000000956959
Brassica carinata ChrB03 1 CH_bca_501 3 3 0.0000151481
Brassica carinata ChrB07 1 CH_bca_736 3 5 0.000151359
Beta vulgaris Scaffold_0006 1 CH_bvu_286 3 11 0.000769378
Camellia sinensis var. sinensis Chr7 1 CH_camsi_256 5 13 0.0000000725908
Camellia sinensis var. sinensis Chr14 1 CH_camsi_436 6 72 0.00000827102
Camellia sinensis var. sinensis Chr5 1 CH_camsi_455 4 10 0.0000117614
Camellia sinensis var. sinensis Chr13 1 CH_camsi_55 8 20 0.00000000000000632191
Camellia sinensis var. sinensis Chr8 1 CH_camsi_569 3 3 0.0000545526
Camellia sinensis var. sinensis Chr7 1 CH_camsi_689 3 4 0.000218036
Cannabis sativa NC_044374.1 1 CH_cansat_107 4 4 0.0000000561035
Cannabis sativa NC_044378.1 1 CH_cansat_108 4 4 0.0000000561035
Cannabis sativa NC_044376.1 1 CH_cansat_142 4 6 0.000000840039
Cannabis sativa NC_044377.1 1 CH_cansat_204 3 3 0.0000502555
Cannabis sativa NC_044371.1 1 CH_cansat_353 3 5 0.000501681
Capsicum annuum PGAv.1.6.scaffold523 1 CH_can_123 5 10 0.0000000841827
Capsicum annuum PGAv.1.6.scaffold459 1 CH_can_36 7 9 0.0000000000000289766
Capsicum annuum PGAv.1.6.scaffold135 1 CH_can_372 4 16 0.000373909
Corylus avellana 5 1 CH_cav_12 10 43 2.43794e-17
Corylus avellana 1 1 CH_cav_28 6 8 0.000000000000791847
Corylus avellana 2 1 CH_cav_69 6 27 0.00000000824579
Coffea canephora chr5 1 CH_ccan_349 3 36 0.000660086
Citrus clementina scaffold_2 1 CH_ccl_211 3 5 0.00000353176
Ceratophyllum demersum 9 1 CH_cde_198 2 2 0.000236939
Carpinus fangiana Cfa06 1 CH_cfa_19 8 12 9.54338e-18
Carpinus fangiana Cfa08 1 CH_cfa_59 7 35 0.000000000152727
Carpinus fangiana Cfa06 1 CH_cfa_66 6 17 0.00000000032686
Cardamine hirsuta Chr7 1 CH_chi_131 4 5 0.000000229548
Cardamine hirsuta Chr7 1 CH_chi_382 3 5 0.000428137
Cardamine hirsuta Chr7 1 CH_chi_383 3 5 0.000428137
Carya illinoinensis Chr05 1 CH_cil_143 6 9 0.000000000268792
Carya illinoinensis Chr11 1 CH_cil_22 11 13 7.67488e-24
Carya illinoinensis Chr05 1 CH_cil_32 10 14 5.10621e-20
Carya illinoinensis Chr10 1 CH_cil_457 3 3 0.000343704
Carya illinoinensis Chr09 1 CH_cil_76 7 8 0.0000000000000525565
Citrullus lanatus CG_Chr02 1 CH_cla_18 5 9 0.000000000402668
Citrullus lanatus CG_Chr10 1 CH_cla_48 4 7 0.000000152045
Citrullus lanatus CG_Chr10 1 CH_cla_99 3 4 0.0000537985
Cucumis melo chr06 1 CH_cme_109 4 8 0.000000661062
Cucumis melo chr06 1 CH_cme_70 5 14 0.0000000125788
Cucumis melo chr11 1 CH_cme_9 9 15 3.63163e-21
Cucumis melo chr12 1 CH_cme_96 4 6 0.000000141817
Chenopodium quinoa C_Quinoa_Scaffold_1337 1 CH_cqu_127 5 12 0.0000000223247
Chenopodium quinoa C_Quinoa_Scaffold_2715 1 CH_cqu_253 4 9 0.00000405763
Chenopodium quinoa C_Quinoa_Scaffold_2858 1 CH_cqu_574 4 29 0.00075385
Chenopodium quinoa C_Quinoa_Scaffold_2939 1 CH_cqu_82 7 39 0.00000000030115
Capsella rubella scaffold_8 1 CH_cru_80 5 7 0.000000000763684
Cucumis sativus L. chr1 1 CH_csa_165 3 3 0.0000119162
Cucumis sativus L. chr2 1 CH_csa_23 7 12 0.0000000000000016327
Cucumis sativus L. chr3 1 CH_csa_233 3 5 0.000119025
Cucumis sativus L. chr3 1 CH_csa_53 5 6 0.0000000000338661
Daucus carota DCARv2_Chr1 1 CH_dca_184 3 3 0.0000093964
Daucus carota DCARv2_Chr3 1 CH_dca_185 3 3 0.0000093964
Daucus carota DCARv2_Chr4 1 CH_dca_191 4 17 0.0000134643
Daucus carota DCARv2_Chr7 1 CH_dca_94 4 5 0.0000000284536
Davidia involucrata GWHABJS00000013 1 CH_din_187 4 10 0.00000364143
Davidia involucrata GWHABJS00000017 1 CH_din_274 5 60 0.0000688903
Davidia involucrata GWHABJS00000020 1 CH_din_389 3 4 0.000224246
Davidia involucrata GWHABJS00000020 1 CH_din_519 3 7 0.000783908
Davidia involucrata GWHABJS00000002 1 CH_din_94 4 5 0.0000000174054
Durio zibethinus NW_019168270.1 1 CH_dzi_103 4 6 0.000000295562
Durio zibethinus NW_019167982.1 1 CH_dzi_393 3 7 0.000874181
Durio zibethinus NW_019167993.1 1 CH_dzi_48 6 17 0.000000000137527
Erigeron canadensis Conyza_canadensis_scaffold:1 1 CH_eca_148 4 5 0.000000241556
Erigeron canadensis Conyza_canadensis_scaffold:9 1 CH_eca_539 3 6 0.000977257
Eucalyptus grandis Chr04 1 CH_egr_191 7 9 0.000000000000122596
Eucalyptus grandis Chr06 1 CH_egr_201 7 10 0.000000000000407992
Eucalyptus grandis Chr05 1 CH_egr_214 7 11 0.00000000000112016
Eucalyptus grandis Chr04 1 CH_egr_89 10 15 5.79145e-20
Erythranthe guttata scaffold_13 1 CH_egut_121 5 9 0.00000000736637
Erythranthe guttata scaffold_1 1 CH_egut_131 7 58 0.0000000181454
Erythranthe guttata scaffold_7 1 CH_egut_226 4 9 0.00000673769
Erythranthe guttata scaffold_2 1 CH_egut_262 3 3 0.0000475922
Eutrema salsugineum scaffold_20 1 CH_esa_117 3 3 0.00000248778
Fragaria x ananassa Fvb3-1 1 CH_fan_23 6 6 0.0000000000000198402
Fragaria x ananassa Fvb3-1 1 CH_fan_578 4 27 0.000634771
Fragaria vesca Fvb3 1 CH_fve_50 7 23 0.0000000000214568
Fragaria vesca Fvb4 1 CH_fve_62 7 27 0.0000000000774336
Fragaria vesca Fvb6 1 CH_fve_72 6 14 0.000000000249669
Gossypium hirsutum A04 1 CH_ghi_21 10 14 4.92813e-22
Gossypium hirsutum A10 1 CH_ghi_262 4 4 0.000000181827
Gossypium hirsutum D05 1 CH_ghi_263 4 4 0.000000181827
Gossypium hirsutum D09 1 CH_ghi_264 4 4 0.000000181827
Gossypium hirsutum A09 1 CH_ghi_362 4 6 0.00000272204
Gossypium hirsutum A11 1 CH_ghi_394 4 7 0.00000634517
Gossypium hirsutum D10 1 CH_ghi_414 4 8 0.0000126778
Gossypium hirsutum D05 1 CH_ghi_57 8 13 4.74518e-16
Gossypium hirsutum D11 1 CH_ghi_7 13 24 1.72139e-27
Glycine max Gm12 1 CH_gma_228 4 15 0.00000163278
Gossypium raimondii Chr09 1 CH_gra_17 8 9 6.912e-18
Gossypium raimondii Chr11 1 CH_gra_176 4 5 0.000000979507
Gossypium raimondii Chr09 1 CH_gra_177 4 5 0.000000979507
Gossypium raimondii Chr02 1 CH_gra_275 3 3 0.000133029
Gossypium raimondii Chr07 1 CH_gra_3 13 20 2.08309e-28
Gossypium raimondii Chr06 1 CH_gra_41 7 10 0.0000000000000672381
Helianthus annuus HanXRQChr13 1 CH_han_151 7 25 0.000000000325868
Helianthus annuus HanXRQChr17 1 CH_han_387 4 8 0.000017206
Helianthus annuus HanXRQChr03 1 CH_han_545 3 3 0.000170406
Lonicera japonica GWHAAZE00000001 1 CH_lonja_272 3 4 0.00000355
Lactuca sativa Lsat_1_v8_lg_4 1 CH_lsa_285 4 10 0.0000115561
Lactuca sativa Lsat_1_v8_lg_8 1 CH_lsa_418 4 19 0.000211671
Lactuca sativa Lsat_1_v8_lg_9 1 CH_lsa_509 3 5 0.000524023
Magnolia biondii Chr17 1 CH_mbi_101 7 36 0.00000000322325
Magnolia biondii Chr02 1 CH_mbi_115 7 40 0.00000000716566
Magnolia biondii Chr18 1 CH_mbi_229 6 44 0.00000205713
Magnolia biondii Chr18 1 CH_mbi_374 4 12 0.0000822216
Magnolia biondii Chr18 1 CH_mbi_39 11 75 0.00000000000000891366
Magnolia biondii Chr07 1 CH_mbi_574 3 4 0.000483778
Malus domestica Chr12 1 CH_mdo_133 5 10 0.00000000146982
Malus domestica Chr11 1 CH_mdo_330 5 46 0.00000784994
Malus domestica Chr17 1 CH_mdo_335 4 14 0.00000959812
Malus domestica Chr10 1 CH_mdo_84 6 14 0.0000000000102804
Malus domestica Chr17 1 CH_mdo_94 5 6 0.0000000000350671
Manihot esculenta Chromosome18 1 CH_mes_109 5 6 0.000000000468499
Manihot esculenta Chromosome02 1 CH_mes_169 4 4 0.0000000691797
Manihot esculenta Chromosome12 1 CH_mes_197 6 44 0.000000585043
Manihot esculenta Chromosome15 1 CH_mes_218 4 7 0.00000241451
Manihot esculenta Chromosome16 1 CH_mes_279 3 3 0.0000596238
Manihot esculenta Chromosome12 1 CH_mes_94 5 5 0.0000000000781572
Medicago truncatula chr3 1 CH_mtr_273 4 5 0.000000068676
Medicago truncatula chr2 1 CH_mtr_303 4 6 0.000000205912
Nelumbo nucifera chr1 1 CH_nnu_270 3 6 0.0000387539
Olea europaea chr6 1 CH_oeu_1 12 23 2.18967e-25
Olea europaea chr21 1 CH_oeu_284 3 4 0.000295423
Olea europaea chr6 1 CH_oeu_41 5 8 0.00000000582232
Olea europaea chr15 1 CH_oeu_7 9 17 3.78268e-18
Oryza sativa ssp. japonica chr03 1 CH_osa_105 4 7 0.0000000924676
Oryza sativa ssp. japonica chr08 1 CH_osa_159 3 3 0.00000556447
Oryza sativa ssp. japonica chr04 1 CH_osa_27 6 13 0.00000000000085879
Petunia axillaris Peaxi162Scf00409 1 CH_pax_277 3 4 0.000230558
Petunia axillaris Peaxi162Scf00082 1 CH_pax_50 5 7 0.00000000167921
Petunia axillaris Peaxi162Scf00332 1 CH_pax_81 4 4 0.0000000690087
Punica granatum NC_045130.1 1 CH_pgr_166 4 9 0.00000737223
Punica granatum NC_045128.1 1 CH_pgr_189 3 3 0.0000505399
Punica granatum NC_045129.1 1 CH_pgr_255 3 4 0.000201976
Punica granatum NC_045130.1 1 CH_pgr_4 14 15 5.32317e-37
Punica granatum NC_045127.1 1 CH_pgr_87 5 11 0.0000000303986
Physcomitrium patens Chr20 1 CH_ppa_306 2 2 0.000612726
Prunus persica Pp04 1 CH_ppe_305 4 13 0.0000361437
Prunus persica Pp04 1 CH_ppe_5 18 62 6.29746e-36
Prunus persica Pp04 1 CH_ppe_523 3 6 0.000908455
Pisum sativum chr7LG7 1 CH_psa_173 3 3 0.00000938779
Pisum sativum chr2LG1 1 CH_psa_87 4 5 0.0000000269224
Papaver somniferum NW_020650415.1 1 CH_pso_15 8 9 9.01686e-24
Populus trichocarpa Chr19 1 CH_ptr_162 4 4 0.0000000341269
Populus trichocarpa Chr19 1 CH_ptr_29 9 15 8.29071e-20
Populus trichocarpa Chr19 1 CH_ptr_75 6 9 0.0000000000023701
Phaseolus vulgaris Chr05 1 CH_pvu_147 4 5 0.000000213778
Phaseolus vulgaris Chr11 1 CH_pvu_16 12 51 2.75155e-21
Phaseolus vulgaris Chr11 1 CH_pvu_383 3 5 0.000400972
Phaseolus vulgaris Chr05 1 CH_pvu_99 6 24 0.00000000578804
Quercus lobata 5 1 CH_qlo_178 7 12 0.000000000000729272
Quercus lobata 8 1 CH_qlo_233 7 20 0.0000000000706336
Quercus lobata 8 1 CH_qlo_271 6 12 0.000000000567452
Quercus lobata 11 1 CH_qlo_278 7 27 0.000000000801732
Quercus lobata 9 1 CH_qlo_37 12 22 3.41227e-24
Quercus lobata 8 1 CH_qlo_835 3 3 0.00016659
Rosa chinensis RcHm_v2.0_Chr1 1 CH_rch_125 8 39 0.00000000000665814
Rosa chinensis RcHm_v2.0_Chr5 1 CH_rch_206 6 22 0.00000000750566
Rosa chinensis RcHm_v2.0_Chr6 1 CH_rch_446 5 34 0.0000256985
Rosa chinensis RcHm_v2.0_Chr3 1 CH_rch_531 4 14 0.0000858222
Rhododendron simsii chr06 1 CH_rsi_13 18 65 5.78522e-32
Rhododendron simsii chr12 1 CH_rsi_176 5 10 0.0000000846437
Rhododendron simsii chr04 1 CH_rsi_36 10 23 2.45137e-18
Rhododendron simsii chr03 1 CH_rsi_392 3 3 0.000138048
Rhododendron simsii ctg121 1 CH_rsi_393 3 3 0.000138048
Striga asiatica scaffold81 1 CH_sas_42 3 3 0.0000103896
Striga asiatica scaffold14 1 CH_sas_51 3 4 0.0000415377
Salvia bowleyana GWHASIU00000002 1 CH_sbo_29 11 68 6.32422e-17
Salvia bowleyana GWHASIU00000004 1 CH_sbo_300 3 3 0.0000572096
Salvia bowleyana GWHASIU00000006 1 CH_sbo_359 3 4 0.000228654
Salvia bowleyana GWHASIU00000004 1 CH_sbo_360 3 4 0.000228654
Salvia bowleyana GWHASIU00000007 1 CH_sbo_85 8 68 0.000000000402831
Salix brachista GWHAAZH00000019 1 CH_sbr_311 4 34 0.00025099
Salix brachista GWHAAZH00000019 1 CH_sbr_48 5 6 0.0000000000186789
Simmondsia chinensis GWHAASQ00000006 1 CH_sci_191 3 6 0.0002475
Simmondsia chinensis GWHAASQ00000021 1 CH_sci_192 3 6 0.0002475
Simmondsia chinensis GWHAASQ00000003 1 CH_sci_26 6 14 0.0000000000116713
Sechium edule LG06 1 CH_sed_163 3 3 0.00001756
Sechium edule LG11 1 CH_sed_164 3 3 0.00001756
Sechium edule LG01 1 CH_sed_21 9 52 0.00000000000000151696
Sechium edule LG08 1 CH_sed_64 4 4 0.0000000137814
Sequoiadendron giganteum chr6 1 CH_sgi_1265 3 3 0.000364313
Sequoiadendron giganteum chr4 1 CH_sgi_205 7 9 0.000000000000202975
Sequoiadendron giganteum chr7 1 CH_sgi_354 7 23 0.00000000134955
Sequoiadendron giganteum chr6 1 CH_sgi_365 6 13 0.00000000265522
Sequoiadendron giganteum chr1 1 CH_sgi_473 5 7 0.0000000307933
Sequoiadendron giganteum chr1 1 CH_sgi_632 5 14 0.00000290152
Sequoiadendron giganteum HRSCAF_1 1 CH_sgi_672 4 6 0.0000110126
Sapria himalayana scaffold68_2605431 1 CH_shi_18 4 5 0.000000000353329
Sapria himalayana scaffold89_1656250 1 CH_shi_50 3 4 0.00000164767
Solanum lycopersicum SL4.0ch01 1 CH_sly_34 8 12 1.12952e-17
Solanum lycopersicum SL4.0ch01 1 CH_sly_94 5 6 0.000000000201213
Solanum pennellii Spenn-ch01 1 CH_spe_144 4 6 0.0000000939688
Solanum pennellii Spenn-ch01 1 CH_spe_220 3 3 0.0000108438
Solanum pennellii Spenn-ch02 1 CH_spe_395 3 6 0.000216579
Solanum pennellii Spenn-ch06 1 CH_spe_97 6 34 0.00000000247092
Solanum tuberosum ST4.03ch06 1 CH_stu_12 14 48 5.66804e-26
Solanum tuberosum ST4.03ch10 1 CH_stu_173 4 4 0.0000000855456
Solanum tuberosum ST4.03ch07 1 CH_stu_289 5 27 0.00000635849
Solanum tuberosum ST4.03ch09 1 CH_stu_307 4 9 0.0000107277
Selenicereus undatus Scaffold_33676 1 CH_sun_22 5 14 0.00000000646278
Selenicereus undatus Scaffold_33680 1 CH_sun_4 10 49 5.99882e-19
Trochodendron aralioides group6 1 CH_tar_135 4 6 0.000000145431
Trochodendron aralioides group6 1 CH_tar_213 3 3 0.0000140576
Trochodendron aralioides group0 1 CH_tar_238 3 4 0.0000561995
Trochodendron aralioides group9 1 CH_tar_61 6 25 0.000000000708399
Theobroma cacao Chromosome_6 1 CH_tca_125 5 10 0.000000020404
Theobroma cacao Chromosome_7 1 CH_tca_251 4 11 0.0000227558
Theobroma cacao Chromosome_7 1 CH_tca_32 9 34 0.00000000000000566715
Theobroma cacao Chromosome_7 1 CH_tca_409 3 5 0.000573411
Tarenaya hassleriana NW_010966092.1 1 CH_tha_124 3 5 0.000168112
Tripterygium wilfordii NC_052238.1 1 CH_twi_136 4 7 0.0000049099
Tripterygium wilfordii NC_052247.1 1 CH_twi_196 3 3 0.000103038
Tripterygium wilfordii NC_052233.1 1 CH_twi_197 3 3 0.000103038
Tripterygium wilfordii NC_052238.1 1 CH_twi_89 5 10 0.0000000471956
Utricularia gibba unitig_62 1 CH_ugi_231 2 2 0.000220378
Vaccinium macrocarpon chr11_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_104 4 5 0.0000000879907
Vaccinium macrocarpon chr2_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_64 5 7 0.000000000308898
Vigna mungo CM024076.1 1 CH_vmu_78 4 6 0.0000000288731
Vanilla planifolia CM028162.1 1 CH_vpl_218 3 7 0.000104191
Vanilla planifolia CM028161.1 1 CH_vpl_284 3 10 0.00035686
Vitis vinifera chr18_random 1 CH_vvi_1 26 54 9.33784e-53
Vitis vinifera chr12 1 CH_vvi_229 5 18 0.0000105286
Vitis vinifera chr19 1 CH_vvi_364 3 3 0.000282136
Vitis vinifera chrUn 1 CH_vvi_399 6 77 0.000540008
Vitis vinifera chr19 1 CH_vvi_92 6 9 0.000000000215753
Zea mays 10 1 CH_zma_124 4 17 0.0000120036
Zea mays 10 1 CH_zma_38 5 9 0.00000000034261
Aethionema arabicum LG-9 2 CH_aar_124 3 4 0.0000407303
Amaranthus hybridus AmaHy_arrow1_Scaffold_9 2 CH_amhyb_68 3 3 0.0000023383
Aquilegia oxysepala CHR04 2 CH_aox_6 9 20 1.89734e-18
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.18 2 CH_arhy_10 17 34 3.26582e-37
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.18 2 CH_arhy_110 7 16 0.00000000000169965
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.08 2 CH_arhy_314 4 6 0.00000171941
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.08 2 CH_arhy_56 8 13 2.04008e-16
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.20 2 CH_arhy_609 3 4 0.000408779
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.10 2 CH_arhy_610 3 4 0.000408779
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.08 2 CH_arhy_611 3 4 0.000408779
Arabidopsis thaliana Chr3 2 CH_ath_379 3 9 0.000463991
Amborella trichopoda AmTr_v1.0_scaffold00043 2 CH_atr_89 4 7 0.0000000956959
Brassica carinata ChrB03 2 CH_bca_501 3 3 0.0000151481
Brassica carinata ChrB07 2 CH_bca_736 3 5 0.000151359
Beta vulgaris Scaffold_0006 2 CH_bvu_286 3 11 0.000769378
Camellia sinensis var. sinensis Chr7 2 CH_camsi_256 5 13 0.0000000725908
Camellia sinensis var. sinensis Chr14 2 CH_camsi_436 6 72 0.00000827102
Camellia sinensis var. sinensis Chr5 2 CH_camsi_455 4 10 0.0000117614
Camellia sinensis var. sinensis Chr13 2 CH_camsi_55 8 20 0.00000000000000632191
Camellia sinensis var. sinensis Chr8 2 CH_camsi_569 3 3 0.0000545526
Camellia sinensis var. sinensis Chr7 2 CH_camsi_689 3 4 0.000218036
Cannabis sativa NC_044374.1 2 CH_cansat_107 4 4 0.0000000561035
Cannabis sativa NC_044378.1 2 CH_cansat_108 4 4 0.0000000561035
Cannabis sativa NC_044376.1 2 CH_cansat_142 4 6 0.000000840039
Cannabis sativa NC_044377.1 2 CH_cansat_204 3 3 0.0000502555
Cannabis sativa NC_044371.1 2 CH_cansat_353 3 5 0.000501681
Capsicum annuum PGAv.1.6.scaffold523 2 CH_can_123 5 10 0.0000000841827
Capsicum annuum PGAv.1.6.scaffold459 2 CH_can_36 7 9 0.0000000000000289766
Capsicum annuum PGAv.1.6.scaffold135 2 CH_can_372 4 16 0.000373909
Corylus avellana 5 2 CH_cav_12 10 43 2.43794e-17
Corylus avellana 1 2 CH_cav_28 6 8 0.000000000000791847
Corylus avellana 2 2 CH_cav_69 6 27 0.00000000824579
Coffea canephora chr5 2 CH_ccan_349 3 36 0.000660086
Citrus clementina scaffold_2 2 CH_ccl_211 3 5 0.00000353176
Ceratophyllum demersum 9 2 CH_cde_198 2 2 0.000236939
Carpinus fangiana Cfa06 2 CH_cfa_19 8 12 9.54338e-18
Carpinus fangiana Cfa08 2 CH_cfa_59 7 35 0.000000000152727
Carpinus fangiana Cfa06 2 CH_cfa_66 6 17 0.00000000032686
Cardamine hirsuta Chr7 2 CH_chi_131 4 5 0.000000229548
Cardamine hirsuta Chr7 2 CH_chi_382 3 5 0.000428137
Cardamine hirsuta Chr7 2 CH_chi_383 3 5 0.000428137
Carya illinoinensis Chr05 2 CH_cil_143 6 9 0.000000000268792
Carya illinoinensis Chr11 2 CH_cil_22 11 13 7.67488e-24
Carya illinoinensis Chr05 2 CH_cil_32 10 14 5.10621e-20
Carya illinoinensis Chr10 2 CH_cil_457 3 3 0.000343704
Carya illinoinensis Chr09 2 CH_cil_76 7 8 0.0000000000000525565
Citrullus lanatus CG_Chr02 2 CH_cla_18 5 9 0.000000000402668
Citrullus lanatus CG_Chr10 2 CH_cla_48 4 7 0.000000152045
Citrullus lanatus CG_Chr10 2 CH_cla_99 3 4 0.0000537985
Cucumis melo chr06 2 CH_cme_109 4 8 0.000000661062
Cucumis melo chr06 2 CH_cme_70 5 14 0.0000000125788
Cucumis melo chr11 2 CH_cme_9 9 15 3.63163e-21
Cucumis melo chr12 2 CH_cme_96 4 6 0.000000141817
Chenopodium quinoa C_Quinoa_Scaffold_1337 2 CH_cqu_127 5 12 0.0000000223247
Chenopodium quinoa C_Quinoa_Scaffold_2715 2 CH_cqu_253 4 9 0.00000405763
Chenopodium quinoa C_Quinoa_Scaffold_2858 2 CH_cqu_574 4 29 0.00075385
Chenopodium quinoa C_Quinoa_Scaffold_2939 2 CH_cqu_82 7 39 0.00000000030115
Capsella rubella scaffold_8 2 CH_cru_80 5 7 0.000000000763684
Cucumis sativus L. chr1 2 CH_csa_165 3 3 0.0000119162
Cucumis sativus L. chr2 2 CH_csa_23 7 12 0.0000000000000016327
Cucumis sativus L. chr3 2 CH_csa_233 3 5 0.000119025
Cucumis sativus L. chr3 2 CH_csa_53 5 6 0.0000000000338661
Daucus carota DCARv2_Chr1 2 CH_dca_184 3 3 0.0000093964
Daucus carota DCARv2_Chr3 2 CH_dca_185 3 3 0.0000093964
Daucus carota DCARv2_Chr4 2 CH_dca_191 4 17 0.0000134643
Daucus carota DCARv2_Chr7 2 CH_dca_94 4 5 0.0000000284536
Davidia involucrata GWHABJS00000013 2 CH_din_187 4 10 0.00000364143
Davidia involucrata GWHABJS00000017 2 CH_din_274 5 60 0.0000688903
Davidia involucrata GWHABJS00000020 2 CH_din_389 3 4 0.000224246
Davidia involucrata GWHABJS00000020 2 CH_din_519 3 7 0.000783908
Davidia involucrata GWHABJS00000002 2 CH_din_94 4 5 0.0000000174054
Durio zibethinus NW_019168270.1 2 CH_dzi_103 4 6 0.000000295562
Durio zibethinus NW_019167982.1 2 CH_dzi_393 3 7 0.000874181
Durio zibethinus NW_019167993.1 2 CH_dzi_48 6 17 0.000000000137527
Erigeron canadensis Conyza_canadensis_scaffold:1 2 CH_eca_148 4 5 0.000000241556
Erigeron canadensis Conyza_canadensis_scaffold:9 2 CH_eca_539 3 6 0.000977257
Eucalyptus grandis Chr04 2 CH_egr_191 7 9 0.000000000000122596
Eucalyptus grandis Chr06 2 CH_egr_201 7 10 0.000000000000407992
Eucalyptus grandis Chr05 2 CH_egr_214 7 11 0.00000000000112016
Eucalyptus grandis Chr11 2 CH_egr_355 5 6 0.00000000592577
Eucalyptus grandis Chr05 2 CH_egr_500 4 4 0.00000052
Eucalyptus grandis Chr04 2 CH_egr_522 5 13 0.000001257
Eucalyptus grandis Chr05 2 CH_egr_642 4 8 0.0000361747
Eucalyptus grandis Chr04 2 CH_egr_89 10 15 5.79145e-20
Erythranthe guttata scaffold_13 2 CH_egut_121 5 9 0.00000000736637
Erythranthe guttata scaffold_1 2 CH_egut_131 7 58 0.0000000181454
Erythranthe guttata scaffold_7 2 CH_egut_226 4 9 0.00000673769
Erythranthe guttata scaffold_2 2 CH_egut_262 3 3 0.0000475922
Eutrema salsugineum scaffold_20 2 CH_esa_117 3 3 0.00000248778
Fragaria x ananassa Fvb3-1 2 CH_fan_23 6 6 0.0000000000000198402
Fragaria x ananassa Fvb3-1 2 CH_fan_578 4 27 0.000634771
Fragaria vesca Fvb3 2 CH_fve_50 7 23 0.0000000000214568
Fragaria vesca Fvb4 2 CH_fve_62 7 27 0.0000000000774336
Fragaria vesca Fvb6 2 CH_fve_72 6 14 0.000000000249669
Gossypium hirsutum A04 2 CH_ghi_21 10 14 4.92813e-22
Gossypium hirsutum A10 2 CH_ghi_262 4 4 0.000000181827
Gossypium hirsutum D05 2 CH_ghi_263 4 4 0.000000181827
Gossypium hirsutum D09 2 CH_ghi_264 4 4 0.000000181827
Gossypium hirsutum A09 2 CH_ghi_362 4 6 0.00000272204
Gossypium hirsutum A11 2 CH_ghi_394 4 7 0.00000634517
Gossypium hirsutum D10 2 CH_ghi_414 4 8 0.0000126778
Gossypium hirsutum A01 2 CH_ghi_528 3 3 0.000148031
Gossypium hirsutum D05 2 CH_ghi_57 8 13 4.74518e-16
Gossypium hirsutum D11 2 CH_ghi_7 13 24 1.72139e-27
Glycine max Gm12 2 CH_gma_228 4 15 0.00000163278
Gossypium raimondii Chr09 2 CH_gra_17 8 9 6.912e-18
Gossypium raimondii Chr11 2 CH_gra_176 4 5 0.000000979507
Gossypium raimondii Chr09 2 CH_gra_177 4 5 0.000000979507
Gossypium raimondii Chr02 2 CH_gra_275 3 3 0.000133029
Gossypium raimondii Chr07 2 CH_gra_3 13 20 2.08309e-28
Gossypium raimondii Chr06 2 CH_gra_41 7 10 0.0000000000000672381
Helianthus annuus HanXRQChr13 2 CH_han_151 7 25 0.000000000325868
Helianthus annuus HanXRQChr17 2 CH_han_387 4 8 0.000017206
Helianthus annuus HanXRQChr03 2 CH_han_545 3 3 0.000170406
Lotus japonicus chr3 2 CH_lja_418 4 43 0.000793953
Lonicera japonica GWHAAZE00000001 2 CH_lonja_272 3 4 0.00000355
Lactuca sativa Lsat_1_v8_lg_4 2 CH_lsa_285 4 10 0.0000115561
Lactuca sativa Lsat_1_v8_lg_8 2 CH_lsa_418 4 19 0.000211671
Lactuca sativa Lsat_1_v8_lg_9 2 CH_lsa_509 3 5 0.000524023
Magnolia biondii Chr17 2 CH_mbi_101 7 36 0.00000000322325
Magnolia biondii Chr02 2 CH_mbi_115 7 40 0.00000000716566
Magnolia biondii Chr18 2 CH_mbi_229 6 44 0.00000205713
Magnolia biondii Chr18 2 CH_mbi_374 4 12 0.0000822216
Magnolia biondii Chr18 2 CH_mbi_39 11 75 0.00000000000000891366
Magnolia biondii Chr07 2 CH_mbi_574 3 4 0.000483778
Malus domestica Chr12 2 CH_mdo_133 5 10 0.00000000146982
Malus domestica Chr11 2 CH_mdo_330 5 46 0.00000784994
Malus domestica Chr17 2 CH_mdo_335 4 14 0.00000959812
Malus domestica Chr10 2 CH_mdo_84 6 14 0.0000000000102804
Malus domestica Chr17 2 CH_mdo_94 5 6 0.0000000000350671
Manihot esculenta Chromosome18 2 CH_mes_109 5 6 0.000000000468499
Manihot esculenta Chromosome02 2 CH_mes_169 4 4 0.0000000691797
Manihot esculenta Chromosome12 2 CH_mes_197 6 44 0.000000585043
Manihot esculenta Chromosome15 2 CH_mes_218 4 7 0.00000241451
Manihot esculenta Chromosome16 2 CH_mes_279 3 3 0.0000596238
Manihot esculenta Chromosome12 2 CH_mes_94 5 5 0.0000000000781572
Nelumbo nucifera chr1 2 CH_nnu_270 3 6 0.0000387539
Olea europaea chr6 2 CH_oeu_1 12 23 2.18967e-25
Olea europaea chr21 2 CH_oeu_284 3 4 0.000295423
Olea europaea chr6 2 CH_oeu_41 5 8 0.00000000582232
Olea europaea chr15 2 CH_oeu_7 9 17 3.78268e-18
Oryza sativa ssp. japonica chr03 2 CH_osa_105 4 7 0.0000000924676
Oryza sativa ssp. japonica chr08 2 CH_osa_159 3 3 0.00000556447
Oryza sativa ssp. japonica chr04 2 CH_osa_27 6 13 0.00000000000085879
Petunia axillaris Peaxi162Scf00409 2 CH_pax_277 3 4 0.000230558
Petunia axillaris Peaxi162Scf00082 2 CH_pax_50 5 7 0.00000000167921
Petunia axillaris Peaxi162Scf00332 2 CH_pax_81 4 4 0.0000000690087
Punica granatum NC_045130.1 2 CH_pgr_166 4 9 0.00000737223
Punica granatum NC_045128.1 2 CH_pgr_189 3 3 0.0000505399
Punica granatum NC_045129.1 2 CH_pgr_255 3 4 0.000201976
Punica granatum NC_045130.1 2 CH_pgr_4 14 15 5.32317e-37
Punica granatum NC_045127.1 2 CH_pgr_87 5 11 0.0000000303986
Physcomitrium patens Chr20 2 CH_ppa_306 2 2 0.000612726
Prunus persica Pp04 2 CH_ppe_305 4 13 0.0000361437
Prunus persica Pp04 2 CH_ppe_5 18 62 6.29746e-36
Prunus persica Pp04 2 CH_ppe_523 3 6 0.000908455
Pisum sativum chr7LG7 2 CH_psa_173 3 3 0.00000938779
Pisum sativum chr2LG1 2 CH_psa_87 4 5 0.0000000269224
Papaver somniferum NW_020650415.1 2 CH_pso_15 8 9 9.01686e-24
Populus trichocarpa Chr19 2 CH_ptr_162 4 4 0.0000000341269
Populus trichocarpa Chr19 2 CH_ptr_29 9 15 8.29071e-20
Populus trichocarpa Chr19 2 CH_ptr_75 6 9 0.0000000000023701
Phaseolus vulgaris Chr05 2 CH_pvu_147 4 5 0.000000213778
Phaseolus vulgaris Chr11 2 CH_pvu_16 12 51 2.75155e-21
Phaseolus vulgaris Chr11 2 CH_pvu_383 3 5 0.000400972
Phaseolus vulgaris Chr05 2 CH_pvu_99 6 24 0.00000000578804
Quercus lobata 5 2 CH_qlo_178 7 12 0.000000000000729272
Quercus lobata 8 2 CH_qlo_233 7 20 0.0000000000706336
Quercus lobata 8 2 CH_qlo_271 6 12 0.000000000567452
Quercus lobata 11 2 CH_qlo_278 7 27 0.000000000801732
Quercus lobata 9 2 CH_qlo_37 12 22 3.41227e-24
Quercus lobata 8 2 CH_qlo_835 3 3 0.00016659
Rosa chinensis RcHm_v2.0_Chr1 2 CH_rch_125 8 39 0.00000000000665814
Rosa chinensis RcHm_v2.0_Chr5 2 CH_rch_206 6 22 0.00000000750566
Rosa chinensis RcHm_v2.0_Chr6 2 CH_rch_446 5 34 0.0000256985
Rosa chinensis RcHm_v2.0_Chr3 2 CH_rch_531 4 14 0.0000858222
Rhododendron simsii chr06 2 CH_rsi_13 18 65 5.78522e-32
Rhododendron simsii chr12 2 CH_rsi_176 5 10 0.0000000846437
Rhododendron simsii chr04 2 CH_rsi_36 10 23 2.45137e-18
Rhododendron simsii chr03 2 CH_rsi_392 3 3 0.000138048
Rhododendron simsii ctg121 2 CH_rsi_393 3 3 0.000138048
Striga asiatica scaffold81 2 CH_sas_42 3 3 0.0000103896
Striga asiatica scaffold14 2 CH_sas_51 3 4 0.0000415377
Salvia bowleyana GWHASIU00000002 2 CH_sbo_29 11 68 6.32422e-17
Salvia bowleyana GWHASIU00000004 2 CH_sbo_300 3 3 0.0000572096
Salvia bowleyana GWHASIU00000006 2 CH_sbo_359 3 4 0.000228654
Salvia bowleyana GWHASIU00000004 2 CH_sbo_360 3 4 0.000228654
Salvia bowleyana GWHASIU00000007 2 CH_sbo_85 8 68 0.000000000402831
Salix brachista GWHAAZH00000019 2 CH_sbr_311 4 34 0.00025099
Salix brachista GWHAAZH00000019 2 CH_sbr_48 5 6 0.0000000000186789
Simmondsia chinensis GWHAASQ00000006 2 CH_sci_191 3 6 0.0002475
Simmondsia chinensis GWHAASQ00000021 2 CH_sci_192 3 6 0.0002475
Simmondsia chinensis GWHAASQ00000003 2 CH_sci_26 6 14 0.0000000000116713
Sechium edule LG06 2 CH_sed_163 3 3 0.00001756
Sechium edule LG11 2 CH_sed_164 3 3 0.00001756
Sechium edule LG01 2 CH_sed_21 9 52 0.00000000000000151696
Sechium edule LG08 2 CH_sed_64 4 4 0.0000000137814
Sequoiadendron giganteum chr6 2 CH_sgi_1265 3 3 0.000364313
Sequoiadendron giganteum chr4 2 CH_sgi_205 7 9 0.000000000000202975
Sequoiadendron giganteum chr7 2 CH_sgi_354 7 23 0.00000000134955
Sequoiadendron giganteum chr6 2 CH_sgi_365 6 13 0.00000000265522
Sequoiadendron giganteum chr1 2 CH_sgi_473 5 7 0.0000000307933
Sequoiadendron giganteum chr1 2 CH_sgi_632 5 14 0.00000290152
Sequoiadendron giganteum HRSCAF_1 2 CH_sgi_672 4 6 0.0000110126
Sapria himalayana scaffold68_2605431 2 CH_shi_18 4 5 0.000000000353329
Sapria himalayana scaffold89_1656250 2 CH_shi_50 3 4 0.00000164767
Solanum lycopersicum SL4.0ch01 2 CH_sly_34 8 12 1.12952e-17
Solanum lycopersicum SL4.0ch01 2 CH_sly_94 5 6 0.000000000201213
Solanum pennellii Spenn-ch01 2 CH_spe_144 4 6 0.0000000939688
Solanum pennellii Spenn-ch01 2 CH_spe_220 3 3 0.0000108438
Solanum pennellii Spenn-ch02 2 CH_spe_395 3 6 0.000216579
Solanum pennellii Spenn-ch06 2 CH_spe_97 6 34 0.00000000247092
Solanum tuberosum ST4.03ch06 2 CH_stu_12 14 48 5.66804e-26
Solanum tuberosum ST4.03ch10 2 CH_stu_173 4 4 0.0000000855456
Solanum tuberosum ST4.03ch07 2 CH_stu_289 5 27 0.00000635849
Solanum tuberosum ST4.03ch09 2 CH_stu_307 4 9 0.0000107277
Selenicereus undatus Scaffold_33676 2 CH_sun_22 5 14 0.00000000646278
Selenicereus undatus Scaffold_33680 2 CH_sun_4 10 49 5.99882e-19
Trochodendron aralioides group6 2 CH_tar_135 4 6 0.000000145431
Trochodendron aralioides group6 2 CH_tar_213 3 3 0.0000140576
Trochodendron aralioides group0 2 CH_tar_238 3 4 0.0000561995
Trochodendron aralioides group9 2 CH_tar_61 6 25 0.000000000708399
Theobroma cacao Chromosome_6 2 CH_tca_125 5 10 0.000000020404
Theobroma cacao Chromosome_7 2 CH_tca_251 4 11 0.0000227558
Theobroma cacao Chromosome_7 2 CH_tca_32 9 34 0.00000000000000566715
Theobroma cacao Chromosome_7 2 CH_tca_409 3 5 0.000573411
Tarenaya hassleriana NW_010966092.1 2 CH_tha_124 3 5 0.000168112
Tripterygium wilfordii NC_052238.1 2 CH_twi_136 4 7 0.0000049099
Tripterygium wilfordii NC_052247.1 2 CH_twi_196 3 3 0.000103038
Tripterygium wilfordii NC_052233.1 2 CH_twi_197 3 3 0.000103038
Tripterygium wilfordii NC_052238.1 2 CH_twi_89 5 10 0.0000000471956
Utricularia gibba unitig_62 2 CH_ugi_231 2 2 0.000220378
Vaccinium macrocarpon chr11_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_104 4 5 0.0000000879907
Vaccinium macrocarpon chr2_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_64 5 7 0.000000000308898
Vigna mungo CM024076.1 2 CH_vmu_78 4 6 0.0000000288731
Vanilla planifolia CM028162.1 2 CH_vpl_218 3 7 0.000104191
Vanilla planifolia CM028161.1 2 CH_vpl_284 3 10 0.00035686
Vitis vinifera chr18_random 2 CH_vvi_1 26 54 9.33784e-53
Vitis vinifera chr12 2 CH_vvi_229 5 18 0.0000105286
Vitis vinifera chr19 2 CH_vvi_364 3 3 0.000282136
Vitis vinifera chrUn 2 CH_vvi_399 6 77 0.000540008
Vitis vinifera chr19 2 CH_vvi_92 6 9 0.000000000215753
Zea mays 10 2 CH_zma_124 4 17 0.0000120036
Zea mays 10 2 CH_zma_38 5 9 0.00000000034261

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001